CsaV3_2G031340 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CCGTTTCCAAAATTTGGATAAAAGTAGTCCAAAATTTTCCATTTTTGTTTATTTAAATTAAAAAAGAACAATTAATAAATTAATAAATTAGAAAAAGAAAAAAGAAAAAATCAGTTGCTTCCTTATTTTTGCAGCTATTTCTTGAATGGATGGAATTTTGCTCTTCCACTCTGTTCATCTCTTTCTCTTCCTAAACCCCATCACTATCTCTTTCTACCCACCCTTTCATGACAACCAATCTTCTACCGGCGCTCCCTTCAATATCCTCTCCCCGTCGCTTCTTTCACTTCCATTTCCGTTCCTTTGATCTTCATGGAGATTCTCTTCCCTCCTCCCTCTTTCTCCATCCAGCTCCCTTCCTCTTCCTCTTTCCTCTCGGATCGGACCTCCGCTCCTCCTCCTCCTCCTCCTCCGCCGCCCGACCATCGCCTTGATTCGCCTTTCAACTCTTTTGATTACTGCTCTGATTCCTCCTCCTCGATTGGTGATCCTGATGATAGCGACGACGAGAGCGTTTCATCCACTGGTGGAGATTCTGAGGAAGTTCAAAGTAAATTATCTCTTCGATCGTTGGAGGACTCTCTTCCGATTAAGTAAGTTGGTTTTTTTTTTTTTCTCTCTCTTTTTCTTTTTCTGTGTTCTGTGTGTTGTTTTATCGATTAATTGATTGAGATCAAGAAACGTTTAGAGAAATATAATTGTGTTATATATATCTTCTTCAAACAATCTTGTGGTCCAGTTAATTTGAAATTTGGTGAAATTTTGAATGATCAGGAGAGGGTTATCGAGTCATTTCTCTGGAAAATCGAAATCGTTTGCGAATTTAGCTGAGGCGAAATCGGTAAAAGATATTGAGAAACATGAAAATTCATTGAATAAGAGAAGACGAATTCTGATTGCGTCGAAATTGGCTAAGAAATCGTCCTTTTACGCTTGGCCAAACCCTAAGTCGATGCCTCTGTTAACACTGAGAGAAGAAGAAGACGATGATAATAATGATGAAGAGGAATCATGTACTACTGCTCCATCTTCTTCTGAAGATAATGAAGAAGACGAAGGCCATGAAAAACGGAAAGGAAAAAGAGTTAGGGATTTTCGTCAGAGAAGATTGATGAGCTTCAAGTCACGAAGCTTTTCTATGGCGGATCTACAACAACAACACCATGGTATTGATGGACAACAAGAACAATGATTCATAGCCTTTACTCTTTTGTTTTTCTTCTTTTCATTTTTTTGTGGTTATTTGTTTCTTCTCCTTCTCTTTTCCTTTTTTCACTTTATTTTTATTTTCTCTTAGATTTCTTTTGTATAAACACCTCTCCATTATAAATAAAATCTTTT ATGGAGATTCTCTTCCCTCCTCCCTCTTTCTCCATCCAGCTCCCTTCCTCTTCCTCTTTCCTCTCGGATCGGACCTCCGCTCCTCCTCCTCCTCCTCCTCCGCCGCCCGACCATCGCCTTGATTCGCCTTTCAACTCTTTTGATTACTGCTCTGATTCCTCCTCCTCGATTGGTGATCCTGATGATAGCGACGACGAGAGCGTTTCATCCACTGGTGGAGATTCTGAGGAAGTTCAAAGTAAATTATCTCTTCGATCGTTGGAGGACTCTCTTCCGATTAAGAGAGGGTTATCGAGTCATTTCTCTGGAAAATCGAAATCGTTTGCGAATTTAGCTGAGGCGAAATCGGTAAAAGATATTGAGAAACATGAAAATTCATTGAATAAGAGAAGACGAATTCTGATTGCGTCGAAATTGGCTAAGAAATCGTCCTTTTACGCTTGGCCAAACCCTAAGTCGATGCCTCTGTTAACACTGAGAGAAGAAGAAGACGATGATAATAATGATGAAGAGGAATCATGTACTACTGCTCCATCTTCTTCTGAAGATAATGAAGAAGACGAAGGCCATGAAAAACGGAAAGGAAAAAGAGTTAGGGATTTTCGTCAGAGAAGATTGATGAGCTTCAAGTCACGAAGCTTTTCTATGGCGGATCTACAACAACAACACCATGGTATTGATGGACAACAAGAACAATGA ATGGAGATTCTCTTCCCTCCTCCCTCTTTCTCCATCCAGCTCCCTTCCTCTTCCTCTTTCCTCTCGGATCGGACCTCCGCTCCTCCTCCTCCTCCTCCTCCGCCGCCCGACCATCGCCTTGATTCGCCTTTCAACTCTTTTGATTACTGCTCTGATTCCTCCTCCTCGATTGGTGATCCTGATGATAGCGACGACGAGAGCGTTTCATCCACTGGTGGAGATTCTGAGGAAGTTCAAAGTAAATTATCTCTTCGATCGTTGGAGGACTCTCTTCCGATTAAGAGAGGGTTATCGAGTCATTTCTCTGGAAAATCGAAATCGTTTGCGAATTTAGCTGAGGCGAAATCGGTAAAAGATATTGAGAAACATGAAAATTCATTGAATAAGAGAAGACGAATTCTGATTGCGTCGAAATTGGCTAAGAAATCGTCCTTTTACGCTTGGCCAAACCCTAAGTCGATGCCTCTGTTAACACTGAGAGAAGAAGAAGACGATGATAATAATGATGAAGAGGAATCATGTACTACTGCTCCATCTTCTTCTGAAGATAATGAAGAAGACGAAGGCCATGAAAAACGGAAAGGAAAAAGAGTTAGGGATTTTCGTCAGAGAAGATTGATGAGCTTCAAGTCACGAAGCTTTTCTATGGCGGATCTACAACAACAACACCATGGTATTGATGGACAACAAGAACAATGA MEILFPPPSFSIQLPSSSSFLSDRTSAPPPPPPPPPDHRLDSPFNSFDYCSDSSSSIGDPDDSDDESVSSTGGDSEEVQSKLSLRSLEDSLPIKRGLSSHFSGKSKSFANLAEAKSVKDIEKHENSLNKRRRILIASKLAKKSSFYAWPNPKSMPLLTLREEEDDDNNDEEESCTTAPSSSEDNEEDEGHEKRKGKRVRDFRQRRLMSFKSRSFSMADLQQQHHGIDGQQEQ* Homology
BLAST of CsaV3_2G031340 vs. NCBI nr
Match: XP_011649757.1 (serine/threonine-protein kinase STE20 [Cucumis sativus] >KGN62861.1 hypothetical protein Csa_022092 [Cucumis sativus]) HSP 1 Score: 432.2 bits (1110), Expect = 2.9e-117 Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0
BLAST of CsaV3_2G031340 vs. NCBI nr
Match: XP_008445075.1 (PREDICTED: protein ENL-like [Cucumis melo]) HSP 1 Score: 368.6 bits (945), Expect = 3.9e-98 Identity = 210/239 (87.87%), Postives = 218/239 (91.21%), Query Frame = 0
BLAST of CsaV3_2G031340 vs. NCBI nr
Match: KAA0065002.1 (protein ENL-like [Cucumis melo var. makuwa]) HSP 1 Score: 364.0 bits (933), Expect = 9.6e-97 Identity = 210/240 (87.50%), Postives = 218/240 (90.83%), Query Frame = 0
BLAST of CsaV3_2G031340 vs. NCBI nr
Match: XP_023546188.1 (uncharacterized protein LOC111805363 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 266.2 bits (679), Expect = 2.7e-67 Identity = 169/255 (66.27%), Postives = 190/255 (74.51%), Query Frame = 0
BLAST of CsaV3_2G031340 vs. NCBI nr
Match: KAG6598807.1 (hypothetical protein SDJN03_08585, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 265.0 bits (676), Expect = 6.1e-67 Identity = 169/255 (66.27%), Postives = 190/255 (74.51%), Query Frame = 0
BLAST of CsaV3_2G031340 vs. ExPASy TrEMBL
Match: A0A0A0LS78 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G377970 PE=4 SV=1) HSP 1 Score: 432.2 bits (1110), Expect = 1.4e-117 Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0
BLAST of CsaV3_2G031340 vs. ExPASy TrEMBL
Match: A0A1S3BCK4 (protein ENL-like OS=Cucumis melo OX=3656 GN=LOC103488223 PE=4 SV=1) HSP 1 Score: 368.6 bits (945), Expect = 1.9e-98 Identity = 210/239 (87.87%), Postives = 218/239 (91.21%), Query Frame = 0
BLAST of CsaV3_2G031340 vs. ExPASy TrEMBL
Match: A0A5A7V9K0 (Protein ENL-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003260 PE=4 SV=1) HSP 1 Score: 364.0 bits (933), Expect = 4.7e-97 Identity = 210/240 (87.50%), Postives = 218/240 (90.83%), Query Frame = 0
BLAST of CsaV3_2G031340 vs. ExPASy TrEMBL
Match: A0A6J1K7A7 (uncharacterized protein LOC111492307 OS=Cucurbita maxima OX=3661 GN=LOC111492307 PE=4 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 1.9e-66 Identity = 167/255 (65.49%), Postives = 188/255 (73.73%), Query Frame = 0
BLAST of CsaV3_2G031340 vs. ExPASy TrEMBL
Match: A0A6J1BUU2 (uncharacterized protein LOC111004943 OS=Momordica charantia OX=3673 GN=LOC111004943 PE=4 SV=1) HSP 1 Score: 260.4 bits (664), Expect = 7.3e-66 Identity = 171/252 (67.86%), Postives = 193/252 (76.59%), Query Frame = 0
BLAST of CsaV3_2G031340 vs. TAIR 10
Match: AT5G24890.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 125.6 bits (314), Expect = 5.4e-29 Identity = 90/190 (47.37%), Postives = 122/190 (64.21%), Query Frame = 0
BLAST of CsaV3_2G031340 vs. TAIR 10
Match: AT2G24550.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31510.1); Has 219 Blast hits to 219 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 2; Plants - 184; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). ) HSP 1 Score: 100.9 bits (250), Expect = 1.4e-21 Identity = 80/195 (41.03%), Postives = 119/195 (61.03%), Query Frame = 0
BLAST of CsaV3_2G031340 vs. TAIR 10
Match: AT4G31510.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 205 Blast hits to 205 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 3; Plants - 187; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). ) HSP 1 Score: 92.0 bits (227), Expect = 6.6e-19 Identity = 76/180 (42.22%), Postives = 111/180 (61.67%), Query Frame = 0
BLAST of CsaV3_2G031340 vs. TAIR 10
Match: AT3G43850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G21940.1); Has 215 Blast hits to 215 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 213; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 56.2 bits (134), Expect = 4.0e-08 Identity = 45/127 (35.43%), Postives = 71/127 (55.91%), Query Frame = 0
BLAST of CsaV3_2G031340 vs. TAIR 10
Match: AT5G21940.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 52.0 bits (123), Expect = 7.6e-07 Identity = 59/159 (37.11%), Postives = 77/159 (48.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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