CsaV3_2G031160 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G031160
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr2: 20509191 .. 20510269 (+)
RNA-Seq ExpressionCsaV3_2G031160
SyntenyCsaV3_2G031160
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AGCCAAAGGTGTGCTGTCCATCTGCAAAAAAATATCGAAATATATTTACATGGATGCATGCAAAATAGTATCAACAATGAGTTACCCTCAGGATAGTAATGACAACGTTAAGTTTTAAAGTACATCAACGAAAATATTTATAAAATCAAGCATCGCATTCTGGTTTTCCTCATTTCCTACTTCTTGAGCATACTATCACAATCAACAGTATCAATATACTTTATAACAGAATAATTGAAAACCAAATGTGCAACTCAGTGAAAGGTACTTTCATTTAAAGGACAAGGTGCAAAAGAAGCCATCTTCTAATTCCTATACGAAAAATTGTAGTGTTCTCTAAGGCCTTTGTGGGTCACGGCCTTAAGGGGCAGAACACAGCTTATATAGATTAGCATCTTTAAGTTAGTTATTACTTAGGCCTTTCTTGGCTTTTTTTTTCCGCCATTTTTCTTAAGTACTCTCTCTTGGACTATTAATAGGGAGATGGACAGAGTGCAGAAAACCAAACAATTATACTCTATCAACCTTATCTAGTCTTTTCATATGAAGATGACAAGTCTTTGCAATACCACTATGGTGGTTCTGCTATTCGAGCTCTAATAGTCTAGTTAGTGGAAGCTTGGAGTAATAGGAAGTGGTTTCACAAGCATCTATCCAAGGGAAGATAGCATGAAGAGACTTTTAGTGCAAAAAGGTTGTTACACAATGGCCTGAATTAAAACTCCTGTTTTTCATAGCTGTAGCATGAAAAGTGAGTTGAATTATGTCCCAGATAGCATTCGGTGGTGCAGCTGATAGAACTAACGTATTTAACTTGATTTACTGGGTTGATTCAATGAGCTGTGACAAGTATTTAAGCAGTGCCCTGTGGCAGGAGAAGACTGGCATGTCATGCAAAGCACGACAAGTTAAAACGGTTAGGCAGCCTTCACCACCGCCAAAACGCTAAATCAACAGTTGGATGGCCAAGAGAACCAACCAATTAAGGGAAGGTGCATTATCCGCATAAGATTTTAACATATACCACTTCAGAGTATCATAAATATAGTAACAGCAGTTCATTTATTTATTCTGAACAT

mRNA sequence

ATGTCCCAGATAGCATTCGGTGGTGCAGCTGATAGAACTAACGTATTTAACTTGATTTACTGGGTTGATTCAATGAGCTGTGACAAGTATTTAAGCAGTGCCCTGTGGCAGGAGAAGACTGGCATGTCATGCAAAGCACGACAAGTTAAAACGGTTAGGCAGCCTTCACCACCGCCAAAACGCTAA

Coding sequence (CDS)

ATGTCCCAGATAGCATTCGGTGGTGCAGCTGATAGAACTAACGTATTTAACTTGATTTACTGGGTTGATTCAATGAGCTGTGACAAGTATTTAAGCAGTGCCCTGTGGCAGGAGAAGACTGGCATGTCATGCAAAGCACGACAAGTTAAAACGGTTAGGCAGCCTTCACCACCGCCAAAACGCTAA

Protein sequence

MSQIAFGGAADRTNVFNLIYWVDSMSCDKYLSSALWQEKTGMSCKARQVKTVRQPSPPPKR*
Homology
[Close]
BLAST of CsaV3_2G031160 vs. NCBI nr
Match: KGN62842.1 (hypothetical protein Csa_022041 [Cucumis sativus])

HSP 1 Score: 129.4 bits (324), Expect = 1.1e-26
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0 

Query: 1  MSQIAFGGAADRTNVFNLIYWVDSMSCDKYLSSALWQEKTGMSCKARQVKTVRQPSPPPK 60
          MSQIAFGGAADRTNVFNLIYWVDSMSCDKYLSSALWQEKTGMSCKARQVKTVRQPSPPPK
Sbjct: 1  MSQIAFGGAADRTNVFNLIYWVDSMSCDKYLSSALWQEKTGMSCKARQVKTVRQPSPPPK 60

Query: 61 R 62
          R
Sbjct: 61 R 61

[Close]
BLAST of CsaV3_2G031160 vs. ExPASy TrEMBL
Match: A0A0A0LPU8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G376810 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 5.2e-27
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0 

Query: 1  MSQIAFGGAADRTNVFNLIYWVDSMSCDKYLSSALWQEKTGMSCKARQVKTVRQPSPPPK 60
          MSQIAFGGAADRTNVFNLIYWVDSMSCDKYLSSALWQEKTGMSCKARQVKTVRQPSPPPK
Sbjct: 1  MSQIAFGGAADRTNVFNLIYWVDSMSCDKYLSSALWQEKTGMSCKARQVKTVRQPSPPPK 60

Query: 61 R 62
          R
Sbjct: 61 R 61

The following BLAST results are available for this feature:
BLAST of CsaV3_2G031160 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN62842.11.1e-26100.00hypothetical protein Csa_022041 [Cucumis sativus][more]
BLAST of CsaV3_2G031160 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G031160 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LPU85.2e-27100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G376810 PE=4 SV=1[more]
BLAST of CsaV3_2G031160 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G031160.1CsaV3_2G031160.1mRNA