CsaV3_2G030900 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G030900
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr2: 20336623 .. 20336884 (+)
RNA-Seq ExpressionCsaV3_2G030900
SyntenyCsaV3_2G030900
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGCGTAATTTTCATTTATTTTTCAACTAGGTCTAATTAAGGAACGGAAAAGACAGTTTTACCCTTGTATCTAGTTCTCCTTCTCCGATTATCCACAGACTCGGCGGCAGCGCCCCAAAATTCCTCCGTCTCTCTTAGTTTCTCTCCTCCGCCGTCTTTCTATCTTTCTCTACTAATTCGTTTCTCCTCTCTTTCACCCGCTCTTTACAGAACTTCAGCGGCTTCCTCGCTCCATCGCAAGAAACTTAAAACCGACTGA

mRNA sequence

ATGCAGCACTCGGCGGCAGCGCCCCAAAATTCCTCCGTCTCTCTTAGTTTCTCTCCTCCGCCGTCTTTCTATCTTTCTCTACTAATTCGTTTCTCCTCTCTTTCACCCGCTCTTTACAGAACTTCAGCGGCTTCCTCGCTCCATCGCAAGAAACTTAAAACCGACTGA

Coding sequence (CDS)

ATGCAGCACTCGGCGGCAGCGCCCCAAAATTCCTCCGTCTCTCTTAGTTTCTCTCCTCCGCCGTCTTTCTATCTTTCTCTACTAATTCGTTTCTCCTCTCTTTCACCCGCTCTTTACAGAACTTCAGCGGCTTCCTCGCTCCATCGCAAGAAACTTAAAACCGACTGA

Protein sequence

MQHSAAAPQNSSVSLSFSPPPSFYLSLLIRFSSLSPALYRTSAASSLHRKKLKTD*
Homology
[Close]
BLAST of CsaV3_2G030900 vs. NCBI nr
Match: KGN62819.1 (hypothetical protein Csa_022136 [Cucumis sativus])

HSP 1 Score: 104.4 bits (259), Expect = 3.3e-19
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0 

Query: 1  MQHSAAAPQNSSVSLSFSPPPSFYLSLLIRFSSLSPALYRTSAASSLHRKKLKTD 56
          MQHSAAAPQNSSVSLSFSPPPSFYLSLLIRFSSLSPALYRTSAASSLHRKKLKTD
Sbjct: 1  MQHSAAAPQNSSVSLSFSPPPSFYLSLLIRFSSLSPALYRTSAASSLHRKKLKTD 55

[Close]
BLAST of CsaV3_2G030900 vs. ExPASy TrEMBL
Match: A0A0A0LP61 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G374610 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.6e-19
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0 

Query: 1  MQHSAAAPQNSSVSLSFSPPPSFYLSLLIRFSSLSPALYRTSAASSLHRKKLKTD 56
          MQHSAAAPQNSSVSLSFSPPPSFYLSLLIRFSSLSPALYRTSAASSLHRKKLKTD
Sbjct: 1  MQHSAAAPQNSSVSLSFSPPPSFYLSLLIRFSSLSPALYRTSAASSLHRKKLKTD 55

The following BLAST results are available for this feature:
BLAST of CsaV3_2G030900 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN62819.13.3e-19100.00hypothetical protein Csa_022136 [Cucumis sativus][more]
BLAST of CsaV3_2G030900 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G030900 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LP611.6e-19100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G374610 PE=4 SV=1[more]
BLAST of CsaV3_2G030900 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G030900.1CsaV3_2G030900.1mRNA