CsaV3_2G030800 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_2G030800
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	LOB domain-containing protein
Location	chr2: 20240741 .. 20241022 (-)
RNA-Seq Expression	CsaV3_2G030800
Synteny	CsaV3_2G030800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCTACGAGGTGAAGCAGCAGAGACTTTGTATTTTGAAGCAAAATGTAGAATTGAAGATCCAATTTACGGATGTGTTGGGATTATTTCCCAATTACAATATGAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCGAGCTGAGATTGCTCTCCTCGCTTCCAACCGTCAACAAGCCCAACACGAAGACTTTCCATTTGATGACCCCAGCTCAGGCCCAATTTTTACTGGGCTTTCCACTCCAGCCCACTTTTCTGAGCAATTGTTTCGTGCTTAG

mRNA sequence

ATGGATCTACGAGGTGAAGCAGCAGAGACTTTGTATTTTGAAGCAAAATGTAGAATTGAAGATCCAATTTACGGATGTGTTGGGATTATTTCCCAATTACAATATGAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCGAGCTGAGATTGCTCTCCTCGCTTCCAACCGTCAACAAGCCCAACACGAAGACTTTCCATTTGATGACCCCAGCTCAGGCCCAATTTTTACTGGGCTTTCCACTCCAGCCCACTTTTCTGAGCAATTGTTTCGTGCTTAG

Coding sequence (CDS)

ATGGATCTACGAGGTGAAGCAGCAGAGACTTTGTATTTTGAAGCAAAATGTAGAATTGAAGATCCAATTTACGGATGTGTTGGGATTATTTCCCAATTACAATATGAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCGAGCTGAGATTGCTCTCCTCGCTTCCAACCGTCAACAAGCCCAACACGAAGACTTTCCATTTGATGACCCCAGCTCAGGCCCAATTTTTACTGGGCTTTCCACTCCAGCCCACTTTTCTGAGCAATTGTTTCGTGCTTAG

Protein sequence

MDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAEIALLASNRQQAQHEDFPFDDPSSGPIFTGLSTPAHFSEQLFRA*

Homology

[Close]

BLAST of CsaV3_2G030800 vs. NCBI nr
Match: KAE8652162.1 (hypothetical protein Csa_022646 [Cucumis sativus])

HSP 1 Score: 193.0 bits (489), Expect = 1.2e-45
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1  MDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAEIALLASNRQQ 60
          MDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAEIALLASNRQQ
Sbjct: 1  MDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAEIALLASNRQQ 60

Query: 61 AQHEDFPFDDPSSGPIFTGLSTPAHFSEQLFRA 94
          AQHEDFPFDDPSSGPIFTGLSTPAHFSEQLFRA
Sbjct: 61 AQHEDFPFDDPSSGPIFTGLSTPAHFSEQLFRA 93

[Close]

BLAST of CsaV3_2G030800 vs. NCBI nr
Match: XP_023522202.1 (LOB domain-containing protein 24-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 122.9 bits (307), Expect = 1.5e-24
Identity = 64/90 (71.11%), Postives = 74/90 (82.22%), Query Frame = 0


Query: 1   MDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAEIALLASNRQQ 60
           + LR EAAETL+FEAKCRIEDP+YGCVGIISQLQ++LHVAETQLAKTRAEIA LASN Q+
Sbjct: 55  LHLRPEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQE 114

Query: 61  AQHEDF---PFDDPSS-GPIFTGLSTPAHF 87
           AQ +DF   P   P++ G    GLSTPAH+
Sbjct: 115 AQPQDFAVQPIQGPNTIGFSQIGLSTPAHW 144

[Close]

BLAST of CsaV3_2G030800 vs. NCBI nr
Match: XP_022923144.1 (LOB domain-containing protein 24-like [Cucurbita moschata])

HSP 1 Score: 120.6 bits (301), Expect = 7.5e-24
Identity = 63/90 (70.00%), Postives = 73/90 (81.11%), Query Frame = 0


Query: 1   MDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAEIALLASNRQQ 60
           + LR EAAE+L+FEAKCRIEDP+YGCVGIISQLQ++LHVAETQLAKTRAEIA LASN Q+
Sbjct: 55  LHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQE 114

Query: 61  AQHEDF---PFDDPSS-GPIFTGLSTPAHF 87
           AQ  DF   P   P++ G    GLSTPAH+
Sbjct: 115 AQPHDFAAQPIQGPNTIGFSQIGLSTPAHW 144

[Close]

BLAST of CsaV3_2G030800 vs. NCBI nr
Match: KAG7014789.1 (LOB domain-containing protein 24, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 119.8 bits (299), Expect = 1.3e-23
Identity = 63/88 (71.59%), Postives = 72/88 (81.82%), Query Frame = 0


Query: 3   LRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAEIALLASNRQQAQ 62
           LR EAAE+L+FEAKCRIEDP+YGCVGIISQLQ++LHVAETQLAKTRAEIA LASN Q+AQ
Sbjct: 57  LRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQ 116

Query: 63  HEDF---PFDDPSS-GPIFTGLSTPAHF 87
             DF   P   P++ G    GLSTPAH+
Sbjct: 117 LHDFAVQPIQGPNTIGFSQIGLSTPAHW 144

[Close]

BLAST of CsaV3_2G030800 vs. NCBI nr
Match: XP_022985104.1 (LOB domain-containing protein 24-like [Cucurbita maxima])

HSP 1 Score: 119.4 bits (298), Expect = 1.7e-23
Identity = 64/89 (71.91%), Postives = 73/89 (82.02%), Query Frame = 0


Query: 3   LRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAEIALLASN-RQQA 62
           LR EAAETL+FEAKCRIEDP+YGCVGIISQLQ++LHVAETQLAKTRAEIA LASN  Q+A
Sbjct: 57  LRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLHQEA 116

Query: 63  QHEDF---PFDDPSS-GPIFTGLSTPAHF 87
           Q +DF   P   P++ G    GLSTPAH+
Sbjct: 117 QPQDFAVEPIQGPNTIGFSQIGLSTPAHW 145

[Close]

BLAST of CsaV3_2G030800 vs. ExPASy Swiss-Prot
Match: P59468 (LOB domain-containing protein 24 OS=Arabidopsis thaliana OX=3702 GN=LBD24 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 4.7e-13
Identity = 33/63 (52.38%), Postives = 46/63 (73.02%), Query Frame = 0


Query: 4   RGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAEIALLASNRQQAQH 63
           R EA E+L FEAKCR++DP+YGCVGII  L+ ++   + +LAKT+AEIA+  +   Q Q+
Sbjct: 58  RAEAVESLCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQTKLSQTQN 117

Query: 64  EDF 67
            DF
Sbjct: 118 SDF 120

[Close]

BLAST of CsaV3_2G030800 vs. ExPASy Swiss-Prot
Match: P59467 (LOB domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN=LBD23 PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 5.2e-12
Identity = 32/63 (50.79%), Postives = 44/63 (69.84%), Query Frame = 0


Query: 4   RGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAEIALLASNRQQAQH 63
           R EA E+L FEAKCR++DP+YGCVGII  L+ ++   + +LAKT+AEIA+  +   Q   
Sbjct: 58  RAEAVESLCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQTKLSQTHI 117

Query: 64  EDF 67
            DF
Sbjct: 118 SDF 120

[Close]

BLAST of CsaV3_2G030800 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 6.0e-08
Identity = 31/75 (41.33%), Postives = 44/75 (58.67%), Query Frame = 0


Query: 4   RGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAEIALLASNRQQAQH 63
           RG+A  ++ +EA  R+ DP+YGCVG IS LQ ++ V + QLA  +AE+  L    +  Q 
Sbjct: 66  RGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHL----RVRQS 125

Query: 64  EDFPF-----DDPSS 74
            +FP      D PSS
Sbjct: 126 TNFPGHGLCPDSPSS 136

[Close]

BLAST of CsaV3_2G030800 vs. ExPASy Swiss-Prot
Match: Q9SA51 (LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 3.9e-07
Identity = 23/48 (47.92%), Postives = 34/48 (70.83%), Query Frame = 0


Query: 4   RGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAEI 52
           R +A +++ +EA  RI+DP+YGCVG IS L  +L   +TQLA  +AE+
Sbjct: 68  RSDAVDSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAEL 115

[Close]

BLAST of CsaV3_2G030800 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 5.1e-07
Identity = 27/69 (39.13%), Postives = 39/69 (56.52%), Query Frame = 0


Query: 4   RGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAEIALLASNRQ---Q 63
           R +A  +L FEA  R+ DP+YGCVG IS LQ ++   + QLA  +AEI  +    +   Q
Sbjct: 61  RADAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPTLQ 120

Query: 64  AQHEDFPFD 70
           + H+    D
Sbjct: 121 SHHQVLELD 129

[Close]

BLAST of CsaV3_2G030800 vs. ExPASy TrEMBL
Match: A0A0A0LLX6 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G373510 PE=3 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 5.8e-46
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1   MDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAEIALLASNRQQ 60
           MDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAEIALLASNRQQ
Sbjct: 55  MDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAEIALLASNRQQ 114

Query: 61  AQHEDFPFDDPSSGPIFTGLSTPAHFSEQLFRA 94
           AQHEDFPFDDPSSGPIFTGLSTPAHFSEQLFRA
Sbjct: 115 AQHEDFPFDDPSSGPIFTGLSTPAHFSEQLFRA 147

[Close]

BLAST of CsaV3_2G030800 vs. ExPASy TrEMBL
Match: A0A6J1E5I6 (LOB domain-containing protein 24-like OS=Cucurbita moschata OX=3662 GN=LOC111430896 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 3.6e-24
Identity = 63/90 (70.00%), Postives = 73/90 (81.11%), Query Frame = 0


Query: 1   MDLRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAEIALLASNRQQ 60
           + LR EAAE+L+FEAKCRIEDP+YGCVGIISQLQ++LHVAETQLAKTRAEIA LASN Q+
Sbjct: 55  LHLRPEAAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQE 114

Query: 61  AQHEDF---PFDDPSS-GPIFTGLSTPAHF 87
           AQ  DF   P   P++ G    GLSTPAH+
Sbjct: 115 AQPHDFAAQPIQGPNTIGFSQIGLSTPAHW 144

[Close]

BLAST of CsaV3_2G030800 vs. ExPASy TrEMBL
Match: A0A6J1JCD0 (LOB domain-containing protein 24-like OS=Cucurbita maxima OX=3661 GN=LOC111483182 PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 8.1e-24
Identity = 64/89 (71.91%), Postives = 73/89 (82.02%), Query Frame = 0


Query: 3   LRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAEIALLASN-RQQA 62
           LR EAAETL+FEAKCRIEDP+YGCVGIISQLQ++LHVAETQLAKTRAEIA LASN  Q+A
Sbjct: 57  LRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLHQEA 116

Query: 63  QHEDF---PFDDPSS-GPIFTGLSTPAHF 87
           Q +DF   P   P++ G    GLSTPAH+
Sbjct: 117 QPQDFAVEPIQGPNTIGFSQIGLSTPAHW 145

[Close]

BLAST of CsaV3_2G030800 vs. ExPASy TrEMBL
Match: A0A0A0L9N7 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G180300 PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 8.1e-24
Identity = 65/95 (68.42%), Postives = 72/95 (75.79%), Query Frame = 0


Query: 3   LRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAEIALLASN-RQQA 62
           LR EAAETL FEAKCRIEDP+YGCVGIISQLQ+ELHVAETQLAKTRAEIA +ASN ++Q 
Sbjct: 57  LRAEAAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKTRAEIACVASNVQEQP 116

Query: 63  QHEDFPFDDPSSGPIFT-----GLSTPAHFSEQLF 92
           Q +DF F +P  GP        GLSTPAH     F
Sbjct: 117 QPQDFAF-EPIQGPNSVGFSQIGLSTPAHCFNSTF 150

[Close]

BLAST of CsaV3_2G030800 vs. ExPASy TrEMBL
Match: A0A1S3AY36 (LOB domain-containing protein 24-like OS=Cucumis melo OX=3656 GN=LOC103484045 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 4.0e-23
Identity = 65/97 (67.01%), Postives = 73/97 (75.26%), Query Frame = 0


Query: 3   LRGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAEIALLASN--RQQ 62
           LRGEAAETL FEAKCRIEDP+YGCVGIISQLQ++LHVAETQLAKTRAEIA +ASN   +Q
Sbjct: 57  LRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACVASNVQEEQ 116

Query: 63  AQHEDFPFDDPSSGPIFT-----GLSTPAH-FSEQLF 92
            Q +DF F  P  GP        GLS+PAH F+   F
Sbjct: 117 PQLQDFAF-QPIQGPNSVGFSQIGLSSPAHCFNSSFF 152

[Close]

BLAST of CsaV3_2G030800 vs. TAIR 10
Match: AT3G26660.1 (LOB domain-containing protein 24 )

HSP 1 Score: 75.1 bits (183), Expect = 3.4e-14
Identity = 33/63 (52.38%), Postives = 46/63 (73.02%), Query Frame = 0


Query: 4   RGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAEIALLASNRQQAQH 63
           R EA E+L FEAKCR++DP+YGCVGII  L+ ++   + +LAKT+AEIA+  +   Q Q+
Sbjct: 58  RAEAVESLCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQTKLSQTQN 117

Query: 64  EDF 67
            DF
Sbjct: 118 SDF 120

[Close]

BLAST of CsaV3_2G030800 vs. TAIR 10
Match: AT3G26620.1 (LOB domain-containing protein 23 )

HSP 1 Score: 71.6 bits (174), Expect = 3.7e-13
Identity = 32/63 (50.79%), Postives = 44/63 (69.84%), Query Frame = 0


Query: 4   RGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAEIALLASNRQQAQH 63
           R EA E+L FEAKCR++DP+YGCVGII  L+ ++   + +LAKT+AEIA+  +   Q   
Sbjct: 58  RAEAVESLCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQTKLSQTHI 117

Query: 64  EDF 67
            DF
Sbjct: 118 SDF 120

[Close]

BLAST of CsaV3_2G030800 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 58.2 bits (139), Expect = 4.3e-09
Identity = 31/75 (41.33%), Postives = 44/75 (58.67%), Query Frame = 0


Query: 4   RGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAEIALLASNRQQAQH 63
           RG+A  ++ +EA  R+ DP+YGCVG IS LQ ++ V + QLA  +AE+  L    +  Q 
Sbjct: 66  RGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHL----RVRQS 125

Query: 64  EDFPF-----DDPSS 74
            +FP      D PSS
Sbjct: 126 TNFPGHGLCPDSPSS 136

[Close]

BLAST of CsaV3_2G030800 vs. TAIR 10
Match: AT1G16530.1 (ASYMMETRIC LEAVES 2-like 9 )

HSP 1 Score: 55.5 bits (132), Expect = 2.8e-08
Identity = 23/48 (47.92%), Postives = 34/48 (70.83%), Query Frame = 0


Query: 4   RGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAEI 52
           R +A +++ +EA  RI+DP+YGCVG IS L  +L   +TQLA  +AE+
Sbjct: 68  RSDAVDSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAEL 115

[Close]

BLAST of CsaV3_2G030800 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 55.1 bits (131), Expect = 3.6e-08
Identity = 27/69 (39.13%), Postives = 39/69 (56.52%), Query Frame = 0


Query: 4   RGEAAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAEIALLASNRQ---Q 63
           R +A  +L FEA  R+ DP+YGCVG IS LQ ++   + QLA  +AEI  +    +   Q
Sbjct: 61  RADAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPTLQ 120

Query: 64  AQHEDFPFD 70
           + H+    D
Sbjct: 121 SHHQVLELD 129

The following BLAST results are available for this feature:

BLAST of CsaV3_2G030800 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8652162.1	1.2e-45	100.00	hypothetical protein Csa_022646 [Cucumis sativus]	[more]
XP_023522202.1	1.5e-24	71.11	LOB domain-containing protein 24-like [Cucurbita pepo subsp. pepo]	[more]
XP_022923144.1	7.5e-24	70.00	LOB domain-containing protein 24-like [Cucurbita moschata]	[more]
KAG7014789.1	1.3e-23	71.59	LOB domain-containing protein 24, partial [Cucurbita argyrosperma subsp. argyros...	[more]
XP_022985104.1	1.7e-23	71.91	LOB domain-containing protein 24-like [Cucurbita maxima]	[more]

BLAST of CsaV3_2G030800 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P59468	4.7e-13	52.38	LOB domain-containing protein 24 OS=Arabidopsis thaliana OX=3702 GN=LBD24 PE=2 S...	[more]
P59467	5.2e-12	50.79	LOB domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN=LBD23 PE=1 S...	[more]
Q9SHE9	6.0e-08	41.33	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]
Q9SA51	3.9e-07	47.92	LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=...	[more]
Q8LBW3	5.1e-07	39.13	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]

BLAST of CsaV3_2G030800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLX6	5.8e-46	100.00	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G373510 PE=3 SV...	[more]
A0A6J1E5I6	3.6e-24	70.00	LOB domain-containing protein 24-like OS=Cucurbita moschata OX=3662 GN=LOC111430...	[more]
A0A6J1JCD0	8.1e-24	71.91	LOB domain-containing protein 24-like OS=Cucurbita maxima OX=3661 GN=LOC11148318...	[more]
A0A0A0L9N7	8.1e-24	68.42	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G180300 PE=3 SV...	[more]
A0A1S3AY36	4.0e-23	67.01	LOB domain-containing protein 24-like OS=Cucumis melo OX=3656 GN=LOC103484045 PE...	[more]

BLAST of CsaV3_2G030800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G26660.1	3.4e-14	52.38	LOB domain-containing protein 24	[more]
AT3G26620.1	3.7e-13	50.79	LOB domain-containing protein 23	[more]
AT1G31320.1	4.3e-09	41.33	LOB domain-containing protein 4	[more]
AT1G16530.1	2.8e-08	47.92	ASYMMETRIC LEAVES 2-like 9	[more]
AT2G30130.1	3.6e-08	39.13	Lateral organ boundaries (LOB) domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 30..64
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 2..64
None	No IPR available	PANTHER	PTHR31301:SF120	LOB DOMAIN-CONTAINING PROTEIN 23-RELATED	coord: 2..64
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 3..48 e-value: 1.1E-10 score: 42.0
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 1..51 score: 9.787525

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G030800.1	CsaV3_2G030800.1	mRNA