CsaV3_2G030220 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G030220
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr2: 19829666 .. 19829983 (+)
RNA-Seq ExpressionCsaV3_2G030220
SyntenyCsaV3_2G030220
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACCAAACCCACTCATATCATATTTACATCATTGAACCATACATAAATGGACTCACTATTTACACCAACTTTTCACATGAATTAAACACTTCCCACTTTATACATAAAAACTCCAAAGAATTACAAAACACTTCCACTTCCACTTCCACCTCTTTAAGATTTTTTTTCTTCAAACCCAATGGCTGGTTGGCTCAACCTTTTTCCTCCTCTGTCTCCGTCTTCCATATTTATAAAGGAGTCTCAAATTATTTACATCCCATTTTTACAAGCTTCATCCCGGATGAGGTCATATTCTTTTTAAGTCTCTCTTTTTAA

mRNA sequence

ATGAACCAAACCCACTCATATCATATTTACATCATTGAACCATACATAAATGGACTCACTATTTACACCAACTTTTCACATGAATTAAACACTTCCCACTTTATACATAAAAACTCCAAAGAATTACAAAACACTTCCACTTCCACTTCCACCTCTTTAAGATTTTTTTTCTTCAAACCCAATGGCTGGTTGGCTCAACCTTTTTCCTCCTCTGTCTCCGTCTTCCATATTTATAAAGGAGTCTCAAATTATTTACATCCCATTTTTACAAGCTTCATCCCGGATGAGGTCATATTCTTTTTAAGTCTCTCTTTTTAA

Coding sequence (CDS)

ATGAACCAAACCCACTCATATCATATTTACATCATTGAACCATACATAAATGGACTCACTATTTACACCAACTTTTCACATGAATTAAACACTTCCCACTTTATACATAAAAACTCCAAAGAATTACAAAACACTTCCACTTCCACTTCCACCTCTTTAAGATTTTTTTTCTTCAAACCCAATGGCTGGTTGGCTCAACCTTTTTCCTCCTCTGTCTCCGTCTTCCATATTTATAAAGGAGTCTCAAATTATTTACATCCCATTTTTACAAGCTTCATCCCGGATGAGGTCATATTCTTTTTAAGTCTCTCTTTTTAA

Protein sequence

MNQTHSYHIYIIEPYINGLTIYTNFSHELNTSHFIHKNSKELQNTSTSTSTSLRFFFFKPNGWLAQPFSSSVSVFHIYKGVSNYLHPIFTSFIPDEVIFFLSLSF*
Homology
[Close]
BLAST of CsaV3_2G030220 vs. NCBI nr
Match: KGN62749.1 (hypothetical protein Csa_021790 [Cucumis sativus])

HSP 1 Score: 213.8 bits (543), Expect = 7.3e-52
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0 

Query: 1   MNQTHSYHIYIIEPYINGLTIYTNFSHELNTSHFIHKNSKELQNTSTSTSTSLRFFFFKP 60
           MNQTHSYHIYIIEPYINGLTIYTNFSHELNTSHFIHKNSKELQNTSTSTSTSLRFFFFKP
Sbjct: 1   MNQTHSYHIYIIEPYINGLTIYTNFSHELNTSHFIHKNSKELQNTSTSTSTSLRFFFFKP 60

Query: 61  NGWLAQPFSSSVSVFHIYKGVSNYLHPIFTSFIPDEVIFFLSLSF 106
           NGWLAQPFSSSVSVFHIYKGVSNYLHPIFTSFIPDEVIFFLSLSF
Sbjct: 61  NGWLAQPFSSSVSVFHIYKGVSNYLHPIFTSFIPDEVIFFLSLSF 105

[Close]
BLAST of CsaV3_2G030220 vs. ExPASy TrEMBL
Match: A0A0A0LNY9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G370480 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 3.6e-52
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0 

Query: 1   MNQTHSYHIYIIEPYINGLTIYTNFSHELNTSHFIHKNSKELQNTSTSTSTSLRFFFFKP 60
           MNQTHSYHIYIIEPYINGLTIYTNFSHELNTSHFIHKNSKELQNTSTSTSTSLRFFFFKP
Sbjct: 1   MNQTHSYHIYIIEPYINGLTIYTNFSHELNTSHFIHKNSKELQNTSTSTSTSLRFFFFKP 60

Query: 61  NGWLAQPFSSSVSVFHIYKGVSNYLHPIFTSFIPDEVIFFLSLSF 106
           NGWLAQPFSSSVSVFHIYKGVSNYLHPIFTSFIPDEVIFFLSLSF
Sbjct: 61  NGWLAQPFSSSVSVFHIYKGVSNYLHPIFTSFIPDEVIFFLSLSF 105

The following BLAST results are available for this feature:
BLAST of CsaV3_2G030220 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN62749.17.3e-52100.00hypothetical protein Csa_021790 [Cucumis sativus][more]
BLAST of CsaV3_2G030220 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G030220 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LNY93.6e-52100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G370480 PE=4 SV=1[more]
BLAST of CsaV3_2G030220 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G030220.1CsaV3_2G030220.1mRNA