CsaV3_2G029560 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_2G029560
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	zinc finger homeobox protein 4-like isoform X1
Location	chr2: 19349470 .. 19351365 (+)
RNA-Seq Expression	CsaV3_2G029560
Synteny	CsaV3_2G029560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CACGGGACGAATAAAAGGCTTAAACCCTAGAGTACCATCCTGAATCTCCATCTATTCGACACGTGTCACAAAGCCACATCCCCTTCTCCAAAATCCTTTCCTATTTTGTTTTGCGAAACCCAGTCCCCAAGTAACACCATTCTCCTCCTCTTCCTCTTCCTCTACCTCTTCTTCTTCCTCCGGTGTTCTATTAATCCCTAAACCCCTTCTCTTCCATGGAATTTCTCTTCATCTGAACTTTCACTCACCAATTCTTTCGATCAAACCAAATAGATCGATTCTCCATGGCTTCCACTTCTTCCACTCATCAATGCTCCATCTCCTTCGATTCCGACGACTTCTCCCCTGAAGAACACTTCGTCGCTCAAATCCTCCAACAATTACCTCTTCTCATTCAACAATCCCACTTCTCTCTTGGCCTATCACCTTCCTGGCCTATCCGACGCAAGAGATCCGCCGTCGATTCCCCGCCGGACACGTCCTCCCTCATCACTCAACCGCCGCTTCCACCACCACCTTGTCTACCGTCGTCCGAGAGAGAAAAGGAGTCTAGTCCAACTACTCCGCTTTCACTCCACTCCTTGCCCTTGTCAAGGAGTGAATCTGATGAGAATACTACTATTGCTAAGGTCTCCAAGAAGAAAGCCCCTGTCGATAAGGTCTCTCATTAATTATAATGCCTCTTCATTCTTCTTCTTTAATTTTTCCCCAAATTTAAGTTTATTGAATTTCTTTTAAACCCTAATTTTAGGGATTTTGTGTTCTCGGGGTTCTGATTCTGTGTTTTTTGGATCTTGAAATCAGAAATCTCAGTATTTGGAAACCATAGAGAAATTAACCCACCAGAAACAAGCTCTGGAAGGGGTGAGTTCTTCTTCTTTTGTCATTTAGTAGCAATTTTTTTTGTTTACTTTTGATGCCCTCATAAGCATTATTTCCTTCTTCCTACAGTTTATTTTCTTAATTTTTTTTTCACTTAAACATAACAACAGGACATTGAAGCTATGAAGCGACATTTTATCAATCTGAAAACTATAAATTCGGAGTTGAAAGCCAAAAAGCAAGAGGTTTGTTCCTATTTTAATCTTATTTGAATTATTTTCCCTTTTTTGTGGGCTCTGTTGAATATGTATATCTCTTTTCTCGAACAGATTCTGGGTGGTTTCAGTAATCTATCAGTAAATCCAAAATTTGGGACCTCAACTTCGGTCGCCATGGAAATAGCTAAGTTAACAGTGAAATCCTCAGACTCAAATGTGGAGAATAATCACGATGAATGTGAACCGTCGATGAAGAATCAGACGGTTCCAGTGGCAGAACAGAGCAACAGTATTCAGAATTACCAAATTCCAATTGGGGGAATTCCTTTGTATGATCCTTCATTGGGCCCAATGGGGATTCCTGATTTGAACCTCTCTTTGGAAGATATTCTTCATAAGAATTACACAAAATATTTGGCTGCTAAAGCAAGACAAAACAGAATTCAGATCTGGAAAAACAAGAACAACAACAACAACAACAATGGAGCTCCCAAATTGCAATCCTAATTCCACTATTTTCCTCCTTTTTTTTTCTTTTTAATCTTAGGATTCAATTCATCATTCACCAATCCCTGTTTTGATTCATGAATTGGGGTAGTTTTTAATTTTATTTTTTCAATTGGGTTACTCAAATTGTAAAGGTACAGAATCTCAGAGTAAGAGTAAGAGCTGACCCTGCTCCCAAATATTTCTCTTAATATATATCTTGTGTTTTTTTTTTTCCTCTTTTCGTATATTCTTTAATTAAAGTATAAATAATAAAAGCTACTTCTTTTTCTTTTTTGGTGATTTTGAATGTATTAGTTTGTTGCCAGAAAAGAACAATATTAAATAAATAAATAAAATTCCATTATTC

mRNA sequence

ATGGCTTCCACTTCTTCCACTCATCAATGCTCCATCTCCTTCGATTCCGACGACTTCTCCCCTGAAGAACACTTCGTCGCTCAAATCCTCCAACAATTACCTCTTCTCATTCAACAATCCCACTTCTCTCTTGGCCTATCACCTTCCTGGCCTATCCGACGCAAGAGATCCGCCGTCGATTCCCCGCCGGACACGTCCTCCCTCATCACTCAACCGCCGCTTCCACCACCACCTTGTCTACCGTCGTCCGAGAGAGAAAAGGAGTCTAGTCCAACTACTCCGCTTTCACTCCACTCCTTGCCCTTGTCAAGGAGTGAATCTGATGAGAATACTACTATTGCTAAGGTCTCCAAGAAGAAAGCCCCTGTCGATAAGAAATCTCAGTATTTGGAAACCATAGAGAAATTAACCCACCAGAAACAAGCTCTGGAAGGGGACATTGAAGCTATGAAGCGACATTTTATCAATCTGAAAACTATAAATTCGGAGTTGAAAGCCAAAAAGCAAGAGATTCTGGGTGGTTTCAGTAATCTATCAGTAAATCCAAAATTTGGGACCTCAACTTCGGTCGCCATGGAAATAGCTAAGTTAACAGTGAAATCCTCAGACTCAAATGTGGAGAATAATCACGATGAATGTGAACCGTCGATGAAGAATCAGACGGTTCCAGTGGCAGAACAGAGCAACAGTATTCAGAATTACCAAATTCCAATTGGGGGAATTCCTTTGTATGATCCTTCATTGGGCCCAATGGGGATTCCTGATTTGAACCTCTCTTTGGAAGATATTCTTCATAAGAATTACACAAAATATTTGGCTGCTAAAGCAAGACAAAACAGAATTCAGATCTGGAAAAACAAGAACAACAACAACAACAACAATGGAGCTCCCAAATTGCAATCCTAA

Coding sequence (CDS)

ATGGCTTCCACTTCTTCCACTCATCAATGCTCCATCTCCTTCGATTCCGACGACTTCTCCCCTGAAGAACACTTCGTCGCTCAAATCCTCCAACAATTACCTCTTCTCATTCAACAATCCCACTTCTCTCTTGGCCTATCACCTTCCTGGCCTATCCGACGCAAGAGATCCGCCGTCGATTCCCCGCCGGACACGTCCTCCCTCATCACTCAACCGCCGCTTCCACCACCACCTTGTCTACCGTCGTCCGAGAGAGAAAAGGAGTCTAGTCCAACTACTCCGCTTTCACTCCACTCCTTGCCCTTGTCAAGGAGTGAATCTGATGAGAATACTACTATTGCTAAGGTCTCCAAGAAGAAAGCCCCTGTCGATAAGAAATCTCAGTATTTGGAAACCATAGAGAAATTAACCCACCAGAAACAAGCTCTGGAAGGGGACATTGAAGCTATGAAGCGACATTTTATCAATCTGAAAACTATAAATTCGGAGTTGAAAGCCAAAAAGCAAGAGATTCTGGGTGGTTTCAGTAATCTATCAGTAAATCCAAAATTTGGGACCTCAACTTCGGTCGCCATGGAAATAGCTAAGTTAACAGTGAAATCCTCAGACTCAAATGTGGAGAATAATCACGATGAATGTGAACCGTCGATGAAGAATCAGACGGTTCCAGTGGCAGAACAGAGCAACAGTATTCAGAATTACCAAATTCCAATTGGGGGAATTCCTTTGTATGATCCTTCATTGGGCCCAATGGGGATTCCTGATTTGAACCTCTCTTTGGAAGATATTCTTCATAAGAATTACACAAAATATTTGGCTGCTAAAGCAAGACAAAACAGAATTCAGATCTGGAAAAACAAGAACAACAACAACAACAACAATGGAGCTCCCAAATTGCAATCCTAA

Protein sequence

MASTSSTHQCSISFDSDDFSPEEHFVAQILQQLPLLIQQSHFSLGLSPSWPIRRKRSAVDSPPDTSSLITQPPLPPPPCLPSSEREKESSPTTPLSLHSLPLSRSESDENTTIAKVSKKKAPVDKKSQYLETIEKLTHQKQALEGDIEAMKRHFINLKTINSELKAKKQEILGGFSNLSVNPKFGTSTSVAMEIAKLTVKSSDSNVENNHDECEPSMKNQTVPVAEQSNSIQNYQIPIGGIPLYDPSLGPMGIPDLNLSLEDILHKNYTKYLAAKARQNRIQIWKNKNNNNNNNGAPKLQS*

Homology

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BLAST of CsaV3_2G029560 vs. NCBI nr
Match: XP_011649664.1 (myocardin-related transcription factor A [Cucumis sativus] >KGN62681.1 hypothetical protein Csa_022065 [Cucumis sativus])

HSP 1 Score: 580.9 bits (1496), Expect = 6.5e-162
Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0


Query: 1   MASTSSTHQCSISFDSDDFSPEEHFVAQILQQLPLLIQQSHFSLGLSPSWPIRRKRSAVD 60
           MASTSSTHQCSISFDSDDFSPEEHFVAQILQQLPLLIQQSHFSLGLSPSWPIRRKRSAVD
Sbjct: 1   MASTSSTHQCSISFDSDDFSPEEHFVAQILQQLPLLIQQSHFSLGLSPSWPIRRKRSAVD 60

Query: 61  SPPDTSSLITQPPLPPPPCLPSSEREKESSPTTPLSLHSLPLSRSESDENTTIAKVSKKK 120
           SPPDTSSLITQPPLPPPPCLPSSEREKESSPTTPLSLHSLPLSRSESDENTTIAKVSKKK
Sbjct: 61  SPPDTSSLITQPPLPPPPCLPSSEREKESSPTTPLSLHSLPLSRSESDENTTIAKVSKKK 120

Query: 121 APVDKKSQYLETIEKLTHQKQALEGDIEAMKRHFINLKTINSELKAKKQEILGGFSNLSV 180
           APVDKKSQYLETIEKLTHQKQALEGDIEAMKRHFINLKTINSELKAKKQEILGGFSNLSV
Sbjct: 121 APVDKKSQYLETIEKLTHQKQALEGDIEAMKRHFINLKTINSELKAKKQEILGGFSNLSV 180

Query: 181 NPKFGTSTSVAMEIAKLTVKSSDSNVENNHDECEPSMKNQTVPVAEQSNSIQNYQIPIGG 240
           NPKFGTSTSVAMEIAKLTVKSSDSNVENNHDECEPSMKNQTVPVAEQSNSIQNYQIPIGG
Sbjct: 181 NPKFGTSTSVAMEIAKLTVKSSDSNVENNHDECEPSMKNQTVPVAEQSNSIQNYQIPIGG 240

Query: 241 IPLYDPSLGPMGIPDLNLSLEDILHKNYTKYLAAKARQNRIQIWKNKNNNNNNNGAPKLQ 300
           IPLYDPSLGPMGIPDLNLSLEDILHKNYTKYLAAKARQNRIQIWKNKNNNNNNNGAPKLQ
Sbjct: 241 IPLYDPSLGPMGIPDLNLSLEDILHKNYTKYLAAKARQNRIQIWKNKNNNNNNNGAPKLQ 300

Query: 301 S 302
           S
Sbjct: 301 S 301

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BLAST of CsaV3_2G029560 vs. NCBI nr
Match: XP_008444813.1 (PREDICTED: uncharacterized protein LOC103488049 [Cucumis melo] >KAA0065161.1 uncharacterized protein E6C27_scaffold82G004970 [Cucumis melo var. makuwa])

HSP 1 Score: 523.5 bits (1347), Expect = 1.2e-144
Identity = 275/301 (91.36%), Postives = 286/301 (95.02%), Query Frame = 0


Query: 1   MASTSSTHQCSISFDSDDFSPEEHFVAQILQQLPLLIQQSHFSLGLSPSWPIRRKRSAVD 60
           MASTSSTHQCSISFDSDDFSPEE FVAQILQQLPLLIQ+S+FSLGLSPSWPIRRKRSAVD
Sbjct: 1   MASTSSTHQCSISFDSDDFSPEELFVAQILQQLPLLIQKSNFSLGLSPSWPIRRKRSAVD 60

Query: 61  SPPDTSSLITQPPLPPPPCLPSSEREKESSPTTPLSLHSLPLSRSESDENTTIAKVSKKK 120
           SPPDT SLITQPPLPP PC PSSEREKESSPTTPLSL+SLPLSRSESDEN TIAKVSKKK
Sbjct: 61  SPPDTPSLITQPPLPPQPCPPSSEREKESSPTTPLSLNSLPLSRSESDENITIAKVSKKK 120

Query: 121 APVDKKSQYLETIEKLTHQKQALEGDIEAMKRHFINLKTINSELKAKKQEILGGFSNLSV 180
           APVDKKSQYLETI+KLTHQKQALEGDIEAMKRHFINLKTINSELKAKKQEIL GF N+SV
Sbjct: 121 APVDKKSQYLETIDKLTHQKQALEGDIEAMKRHFINLKTINSELKAKKQEILDGFGNVSV 180

Query: 181 NPKFGTSTSVAMEIAKLTVKSSDSNVENNHDECEPSMKNQTVPVAEQSNSIQNYQIPIGG 240
           NP+ GTS+SVAME+AKLTVKSS SNVENNHDECEPSMKNQTVP AEQ NS +NYQIPIGG
Sbjct: 181 NPEIGTSSSVAMEVAKLTVKSSYSNVENNHDECEPSMKNQTVPTAEQGNSNRNYQIPIGG 240

Query: 241 IPLYDPSLGPMGIPDLNLSLEDILHKNYTKYLAAKARQNRIQIWKNKNNNNNNNGAPKLQ 300
           IPLYDPSLGPMGIPDLNLSLEDI HK+YTKYLAA+ARQNRIQIWKNK  NNNNNGAPKLQ
Sbjct: 241 IPLYDPSLGPMGIPDLNLSLEDIFHKSYTKYLAARARQNRIQIWKNK--NNNNNGAPKLQ 299

Query: 301 S 302
           S
Sbjct: 301 S 299

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BLAST of CsaV3_2G029560 vs. NCBI nr
Match: XP_008444812.1 (PREDICTED: uncharacterized protein LOC103488048 [Cucumis melo] >KAA0065162.1 uncharacterized protein E6C27_scaffold82G004980 [Cucumis melo var. makuwa])

HSP 1 Score: 350.5 bits (898), Expect = 1.4e-92
Identity = 199/295 (67.46%), Postives = 230/295 (77.97%), Query Frame = 0


Query: 5   SSTHQCSISFDSDDFSPEEHFVAQILQQLPLLIQQSHFSLGLSPSWPIRRKRSAVDSPPD 64
           +STH+CSISF+SD+F+P+EHFVA IL++L LLIQ+S FSLGL PSWP+RRKRSAV SPPD
Sbjct: 2   ASTHKCSISFNSDEFTPKEHFVADILEELTLLIQKSEFSLGLPPSWPVRRKRSAVVSPPD 61

Query: 65  TSSLITQPPLPPPPCLPSSEREKESSPTTPLSLHSLPLSRSESDENTTIAKVSKKKAPVD 124
            SS++ QPP PP     SSER KESSPTTPLS +   L RSESDEN    KVSK+KAP+D
Sbjct: 62  CSSVVAQPPPPP----SSSERAKESSPTTPLSFN---LLRSESDENIANVKVSKRKAPLD 121

Query: 125 KKSQYLETIEKLTHQKQALEGDIEAMKRHFINLKTINSELKAKKQE---ILGGFSNLSVN 184
           KK QYLETI+KLTHQ QAL  D+EAMK+HF++LKTINSELKAKKQE   ILGG +N S  
Sbjct: 122 KKFQYLETIDKLTHQNQALVKDVEAMKQHFVHLKTINSELKAKKQEVPMILGGSTNQSEI 181

Query: 185 PKFGTSTSVAMEIAKLTVKSSDSNVENNHDECEPSMKNQTVPVAEQSNSIQNYQIPIGGI 244
           P+ GTS+S          KSS SNVENN  EC+PSMKNQT PVAEQSN  QN+QIP G I
Sbjct: 182 PEIGTSSS--------GTKSSHSNVENNLHECQPSMKNQTAPVAEQSNHNQNHQIPTGEI 241

Query: 245 PLYDPSLGPMGIPDLNLSLEDILHKNYTKYLAAKARQNRIQIWKNKNNNNNNNGA 297
           PL D    PMGIPDLNL++E  +  NYTKY+AAKARQNRI+IWKNK NNN+N  A
Sbjct: 242 PLLD----PMGIPDLNLTIEQNVQMNYTKYMAAKARQNRIRIWKNKKNNNSNGPA 277

[Close]

BLAST of CsaV3_2G029560 vs. NCBI nr
Match: XP_011649663.1 (uncharacterized protein LOC105434650 [Cucumis sativus] >KGN62680.1 hypothetical protein Csa_022360 [Cucumis sativus])

HSP 1 Score: 292.7 bits (748), Expect = 3.5e-75
Identity = 179/291 (61.51%), Postives = 208/291 (71.48%), Query Frame = 0


Query: 5   SSTHQCSISFDSDDFSPEEHFVAQILQQLPLLIQQSHFSLGLSPSWPIRRKRSAVDSPPD 64
           +ST   SIS +SDDF+PE+H VA IL++LPLLIQ+S FSLGL PSWPIRRKRSAV SP  
Sbjct: 2   ASTRGGSISLNSDDFTPEDHKVADILKELPLLIQKSEFSLGLPPSWPIRRKRSAVVSPLG 61

Query: 65  TSSLITQPPLPPPPCLPSSEREKESSPTTPLSLHSLPLSRSESDENTTIAKVSKKKAPVD 124
            S+++ QPP PP     SSE +KE+SPTTPLSL SL LSRSESDEN    KVSK+KAP+ 
Sbjct: 62  CSTVVAQPPPPP----SSSEEDKETSPTTPLSLDSLTLSRSESDENIANVKVSKRKAPLA 121

Query: 125 KKSQYLETIEKLTHQKQALEGDIEAMKRHFINLKTINSELKAKKQE---ILGGFSNLSVN 184
           KK +  E+++KLTHQ QAL  + EA K+ F + KTINSELKAKKQE   ILGG +N S  
Sbjct: 122 KKFKCAESVDKLTHQNQALGENFEAKKQRFAHPKTINSELKAKKQEASMILGGSTNRSEI 181

Query: 185 PKFGTSTSVAMEIAKLTVKSSDSNVENNHDECEPSMKNQTVPVAEQSNSIQNYQIPIGGI 244
           P+ GTSTS          KSSD N+ENN  ECEPS KNQT P+AEQSN  QN+QIPI  I
Sbjct: 182 PENGTSTS--------GTKSSDLNMENNLHECEPSTKNQTAPMAEQSNDNQNHQIPIDEI 241

Query: 245 PLYDPSLGPMGIPDLNLSLEDILHKNYTKYLAAKARQNRIQIWKNKNNNNN 293
           PL D     MGIPDLNL++E     NY K LAAKARQNR +I KNK N  N
Sbjct: 242 PLLD----LMGIPDLNLTVEQNCRVNYKKQLAAKARQNRARICKNKRNKKN 276

[Close]

BLAST of CsaV3_2G029560 vs. NCBI nr
Match: XP_022996985.1 (zinc finger homeobox protein 4-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 286.6 bits (732), Expect = 2.5e-73
Identity = 169/305 (55.41%), Postives = 215/305 (70.49%), Query Frame = 0


Query: 1   MASTSSTHQCSISFDSDDFSPEEHFVAQILQQLPLLIQQSHFSLGLSPSWPIRRKRSAVD 60
           MAST+  HQC+   D D  +P+E    QIL + PLL+QQ  FSLGL P+WP+R KRSAV 
Sbjct: 1   MASTNPVHQCAAP-DLDALTPDELLGCQILSEFPLLVQQFEFSLGLPPAWPVRAKRSAVV 60

Query: 61  SPPDTSSLITQPPLPPPPCLPSSEREKESSPTTPLSLHSLPLSRSESDENTTIAKVSKKK 120
           SPPD+ S++  P  PPPP  PSS ++KESSPTTP SL SLPLSR ESDE    A +  KK
Sbjct: 61  SPPDSVSIVPPPRPPPPPPPPSSGKDKESSPTTPFSLDSLPLSRCESDE-INKANLPNKK 120

Query: 121 APVDKKSQYLETIEKLTHQKQALEGDIEAMKRHFINLKTINSELKAKKQEILGGFSNLSV 180
             +DKKSQYLET+ +LT Q QAL G ++ +KRH+  LKT NSELKAK+Q+++      S 
Sbjct: 121 PCLDKKSQYLETVHQLTQQNQALVGKVKLIKRHYNELKTTNSELKAKRQKMIQDSKKEST 180

Query: 181 NPKFGTSTSVAMEIAKLTVKSSDSNVENNHDECEPSMKNQT-VPVA----EQSNSIQNYQ 240
           NP+   S+S A++  K TVK      +++  +C+P +KNQT VP A    EQSNS QN +
Sbjct: 181 NPEIRASSS-AIKAVKFTVKPRIPEEKHHFHQCQPPIKNQTAVPAAVSTTEQSNS-QNVR 240

Query: 241 IPIGGIPLYDPSLGPMGIPDLNLSLEDILHKNYTKYLAAKARQNRIQIWKNK-NNNNNNN 300
           IP G I +YDPS GP GIPDLNLS ++I  +NYT+ +AA+ARQNRI+IWK+K NNNNNNN
Sbjct: 241 IPNGAISIYDPSFGPTGIPDLNLSFDEISQRNYTRCMAAQARQNRIKIWKSKNNNNNNNN 300

[Close]

BLAST of CsaV3_2G029560 vs. ExPASy TrEMBL
Match: A0A0A0LRP1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368820 PE=4 SV=1)

HSP 1 Score: 580.9 bits (1496), Expect = 3.1e-162
Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0


Query: 1   MASTSSTHQCSISFDSDDFSPEEHFVAQILQQLPLLIQQSHFSLGLSPSWPIRRKRSAVD 60
           MASTSSTHQCSISFDSDDFSPEEHFVAQILQQLPLLIQQSHFSLGLSPSWPIRRKRSAVD
Sbjct: 1   MASTSSTHQCSISFDSDDFSPEEHFVAQILQQLPLLIQQSHFSLGLSPSWPIRRKRSAVD 60

Query: 61  SPPDTSSLITQPPLPPPPCLPSSEREKESSPTTPLSLHSLPLSRSESDENTTIAKVSKKK 120
           SPPDTSSLITQPPLPPPPCLPSSEREKESSPTTPLSLHSLPLSRSESDENTTIAKVSKKK
Sbjct: 61  SPPDTSSLITQPPLPPPPCLPSSEREKESSPTTPLSLHSLPLSRSESDENTTIAKVSKKK 120

Query: 121 APVDKKSQYLETIEKLTHQKQALEGDIEAMKRHFINLKTINSELKAKKQEILGGFSNLSV 180
           APVDKKSQYLETIEKLTHQKQALEGDIEAMKRHFINLKTINSELKAKKQEILGGFSNLSV
Sbjct: 121 APVDKKSQYLETIEKLTHQKQALEGDIEAMKRHFINLKTINSELKAKKQEILGGFSNLSV 180

Query: 181 NPKFGTSTSVAMEIAKLTVKSSDSNVENNHDECEPSMKNQTVPVAEQSNSIQNYQIPIGG 240
           NPKFGTSTSVAMEIAKLTVKSSDSNVENNHDECEPSMKNQTVPVAEQSNSIQNYQIPIGG
Sbjct: 181 NPKFGTSTSVAMEIAKLTVKSSDSNVENNHDECEPSMKNQTVPVAEQSNSIQNYQIPIGG 240

Query: 241 IPLYDPSLGPMGIPDLNLSLEDILHKNYTKYLAAKARQNRIQIWKNKNNNNNNNGAPKLQ 300
           IPLYDPSLGPMGIPDLNLSLEDILHKNYTKYLAAKARQNRIQIWKNKNNNNNNNGAPKLQ
Sbjct: 241 IPLYDPSLGPMGIPDLNLSLEDILHKNYTKYLAAKARQNRIQIWKNKNNNNNNNGAPKLQ 300

Query: 301 S 302
           S
Sbjct: 301 S 301

[Close]

BLAST of CsaV3_2G029560 vs. ExPASy TrEMBL
Match: A0A5A7VHE1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004970 PE=4 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 6.0e-145
Identity = 275/301 (91.36%), Postives = 286/301 (95.02%), Query Frame = 0


Query: 1   MASTSSTHQCSISFDSDDFSPEEHFVAQILQQLPLLIQQSHFSLGLSPSWPIRRKRSAVD 60
           MASTSSTHQCSISFDSDDFSPEE FVAQILQQLPLLIQ+S+FSLGLSPSWPIRRKRSAVD
Sbjct: 1   MASTSSTHQCSISFDSDDFSPEELFVAQILQQLPLLIQKSNFSLGLSPSWPIRRKRSAVD 60

Query: 61  SPPDTSSLITQPPLPPPPCLPSSEREKESSPTTPLSLHSLPLSRSESDENTTIAKVSKKK 120
           SPPDT SLITQPPLPP PC PSSEREKESSPTTPLSL+SLPLSRSESDEN TIAKVSKKK
Sbjct: 61  SPPDTPSLITQPPLPPQPCPPSSEREKESSPTTPLSLNSLPLSRSESDENITIAKVSKKK 120

Query: 121 APVDKKSQYLETIEKLTHQKQALEGDIEAMKRHFINLKTINSELKAKKQEILGGFSNLSV 180
           APVDKKSQYLETI+KLTHQKQALEGDIEAMKRHFINLKTINSELKAKKQEIL GF N+SV
Sbjct: 121 APVDKKSQYLETIDKLTHQKQALEGDIEAMKRHFINLKTINSELKAKKQEILDGFGNVSV 180

Query: 181 NPKFGTSTSVAMEIAKLTVKSSDSNVENNHDECEPSMKNQTVPVAEQSNSIQNYQIPIGG 240
           NP+ GTS+SVAME+AKLTVKSS SNVENNHDECEPSMKNQTVP AEQ NS +NYQIPIGG
Sbjct: 181 NPEIGTSSSVAMEVAKLTVKSSYSNVENNHDECEPSMKNQTVPTAEQGNSNRNYQIPIGG 240

Query: 241 IPLYDPSLGPMGIPDLNLSLEDILHKNYTKYLAAKARQNRIQIWKNKNNNNNNNGAPKLQ 300
           IPLYDPSLGPMGIPDLNLSLEDI HK+YTKYLAA+ARQNRIQIWKNK  NNNNNGAPKLQ
Sbjct: 241 IPLYDPSLGPMGIPDLNLSLEDIFHKSYTKYLAARARQNRIQIWKNK--NNNNNGAPKLQ 299

Query: 301 S 302
           S
Sbjct: 301 S 299

[Close]

BLAST of CsaV3_2G029560 vs. ExPASy TrEMBL
Match: A0A1S3BAR4 (uncharacterized protein LOC103488049 OS=Cucumis melo OX=3656 GN=LOC103488049 PE=4 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 6.0e-145
Identity = 275/301 (91.36%), Postives = 286/301 (95.02%), Query Frame = 0


Query: 1   MASTSSTHQCSISFDSDDFSPEEHFVAQILQQLPLLIQQSHFSLGLSPSWPIRRKRSAVD 60
           MASTSSTHQCSISFDSDDFSPEE FVAQILQQLPLLIQ+S+FSLGLSPSWPIRRKRSAVD
Sbjct: 1   MASTSSTHQCSISFDSDDFSPEELFVAQILQQLPLLIQKSNFSLGLSPSWPIRRKRSAVD 60

Query: 61  SPPDTSSLITQPPLPPPPCLPSSEREKESSPTTPLSLHSLPLSRSESDENTTIAKVSKKK 120
           SPPDT SLITQPPLPP PC PSSEREKESSPTTPLSL+SLPLSRSESDEN TIAKVSKKK
Sbjct: 61  SPPDTPSLITQPPLPPQPCPPSSEREKESSPTTPLSLNSLPLSRSESDENITIAKVSKKK 120

Query: 121 APVDKKSQYLETIEKLTHQKQALEGDIEAMKRHFINLKTINSELKAKKQEILGGFSNLSV 180
           APVDKKSQYLETI+KLTHQKQALEGDIEAMKRHFINLKTINSELKAKKQEIL GF N+SV
Sbjct: 121 APVDKKSQYLETIDKLTHQKQALEGDIEAMKRHFINLKTINSELKAKKQEILDGFGNVSV 180

Query: 181 NPKFGTSTSVAMEIAKLTVKSSDSNVENNHDECEPSMKNQTVPVAEQSNSIQNYQIPIGG 240
           NP+ GTS+SVAME+AKLTVKSS SNVENNHDECEPSMKNQTVP AEQ NS +NYQIPIGG
Sbjct: 181 NPEIGTSSSVAMEVAKLTVKSSYSNVENNHDECEPSMKNQTVPTAEQGNSNRNYQIPIGG 240

Query: 241 IPLYDPSLGPMGIPDLNLSLEDILHKNYTKYLAAKARQNRIQIWKNKNNNNNNNGAPKLQ 300
           IPLYDPSLGPMGIPDLNLSLEDI HK+YTKYLAA+ARQNRIQIWKNK  NNNNNGAPKLQ
Sbjct: 241 IPLYDPSLGPMGIPDLNLSLEDIFHKSYTKYLAARARQNRIQIWKNK--NNNNNGAPKLQ 299

Query: 301 S 302
           S
Sbjct: 301 S 299

[Close]

BLAST of CsaV3_2G029560 vs. ExPASy TrEMBL
Match: A0A5A7VA15 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004980 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 6.9e-93
Identity = 199/295 (67.46%), Postives = 230/295 (77.97%), Query Frame = 0


Query: 5   SSTHQCSISFDSDDFSPEEHFVAQILQQLPLLIQQSHFSLGLSPSWPIRRKRSAVDSPPD 64
           +STH+CSISF+SD+F+P+EHFVA IL++L LLIQ+S FSLGL PSWP+RRKRSAV SPPD
Sbjct: 2   ASTHKCSISFNSDEFTPKEHFVADILEELTLLIQKSEFSLGLPPSWPVRRKRSAVVSPPD 61

Query: 65  TSSLITQPPLPPPPCLPSSEREKESSPTTPLSLHSLPLSRSESDENTTIAKVSKKKAPVD 124
            SS++ QPP PP     SSER KESSPTTPLS +   L RSESDEN    KVSK+KAP+D
Sbjct: 62  CSSVVAQPPPPP----SSSERAKESSPTTPLSFN---LLRSESDENIANVKVSKRKAPLD 121

Query: 125 KKSQYLETIEKLTHQKQALEGDIEAMKRHFINLKTINSELKAKKQE---ILGGFSNLSVN 184
           KK QYLETI+KLTHQ QAL  D+EAMK+HF++LKTINSELKAKKQE   ILGG +N S  
Sbjct: 122 KKFQYLETIDKLTHQNQALVKDVEAMKQHFVHLKTINSELKAKKQEVPMILGGSTNQSEI 181

Query: 185 PKFGTSTSVAMEIAKLTVKSSDSNVENNHDECEPSMKNQTVPVAEQSNSIQNYQIPIGGI 244
           P+ GTS+S          KSS SNVENN  EC+PSMKNQT PVAEQSN  QN+QIP G I
Sbjct: 182 PEIGTSSS--------GTKSSHSNVENNLHECQPSMKNQTAPVAEQSNHNQNHQIPTGEI 241

Query: 245 PLYDPSLGPMGIPDLNLSLEDILHKNYTKYLAAKARQNRIQIWKNKNNNNNNNGA 297
           PL D    PMGIPDLNL++E  +  NYTKY+AAKARQNRI+IWKNK NNN+N  A
Sbjct: 242 PLLD----PMGIPDLNLTIEQNVQMNYTKYMAAKARQNRIRIWKNKKNNNSNGPA 277

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BLAST of CsaV3_2G029560 vs. ExPASy TrEMBL
Match: A0A1S3BC34 (uncharacterized protein LOC103488048 OS=Cucumis melo OX=3656 GN=LOC103488048 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 6.9e-93
Identity = 199/295 (67.46%), Postives = 230/295 (77.97%), Query Frame = 0


Query: 5   SSTHQCSISFDSDDFSPEEHFVAQILQQLPLLIQQSHFSLGLSPSWPIRRKRSAVDSPPD 64
           +STH+CSISF+SD+F+P+EHFVA IL++L LLIQ+S FSLGL PSWP+RRKRSAV SPPD
Sbjct: 2   ASTHKCSISFNSDEFTPKEHFVADILEELTLLIQKSEFSLGLPPSWPVRRKRSAVVSPPD 61

Query: 65  TSSLITQPPLPPPPCLPSSEREKESSPTTPLSLHSLPLSRSESDENTTIAKVSKKKAPVD 124
            SS++ QPP PP     SSER KESSPTTPLS +   L RSESDEN    KVSK+KAP+D
Sbjct: 62  CSSVVAQPPPPP----SSSERAKESSPTTPLSFN---LLRSESDENIANVKVSKRKAPLD 121

Query: 125 KKSQYLETIEKLTHQKQALEGDIEAMKRHFINLKTINSELKAKKQE---ILGGFSNLSVN 184
           KK QYLETI+KLTHQ QAL  D+EAMK+HF++LKTINSELKAKKQE   ILGG +N S  
Sbjct: 122 KKFQYLETIDKLTHQNQALVKDVEAMKQHFVHLKTINSELKAKKQEVPMILGGSTNQSEI 181

Query: 185 PKFGTSTSVAMEIAKLTVKSSDSNVENNHDECEPSMKNQTVPVAEQSNSIQNYQIPIGGI 244
           P+ GTS+S          KSS SNVENN  EC+PSMKNQT PVAEQSN  QN+QIP G I
Sbjct: 182 PEIGTSSS--------GTKSSHSNVENNLHECQPSMKNQTAPVAEQSNHNQNHQIPTGEI 241

Query: 245 PLYDPSLGPMGIPDLNLSLEDILHKNYTKYLAAKARQNRIQIWKNKNNNNNNNGA 297
           PL D    PMGIPDLNL++E  +  NYTKY+AAKARQNRI+IWKNK NNN+N  A
Sbjct: 242 PLLD----PMGIPDLNLTIEQNVQMNYTKYMAAKARQNRIRIWKNKKNNNSNGPA 277

The following BLAST results are available for this feature:

BLAST of CsaV3_2G029560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011649664.1	6.5e-162	100.00	myocardin-related transcription factor A [Cucumis sativus] >KGN62681.1 hypotheti...	[more]
XP_008444813.1	1.2e-144	91.36	PREDICTED: uncharacterized protein LOC103488049 [Cucumis melo] >KAA0065161.1 unc...	[more]
XP_008444812.1	1.4e-92	67.46	PREDICTED: uncharacterized protein LOC103488048 [Cucumis melo] >KAA0065162.1 unc...	[more]
XP_011649663.1	3.5e-75	61.51	uncharacterized protein LOC105434650 [Cucumis sativus] >KGN62680.1 hypothetical ...	[more]
XP_022996985.1	2.5e-73	55.41	zinc finger homeobox protein 4-like isoform X1 [Cucurbita maxima]	[more]

BLAST of CsaV3_2G029560 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_2G029560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRP1	3.1e-162	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368820 PE=4 SV=1	[more]
A0A5A7VHE1	6.0e-145	91.36	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3BAR4	6.0e-145	91.36	uncharacterized protein LOC103488049 OS=Cucumis melo OX=3656 GN=LOC103488049 PE=...	[more]
A0A5A7VA15	6.9e-93	67.46	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3BC34	6.9e-93	67.46	uncharacterized protein LOC103488048 OS=Cucumis melo OX=3656 GN=LOC103488048 PE=...	[more]

BLAST of CsaV3_2G029560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 126..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..119
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..82
None	No IPR available	PANTHER	PTHR37614	OS02G0121400 PROTEIN	coord: 3..293

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G029560.1	CsaV3_2G029560.1	mRNA