CsaV3_2G029120 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_2G029120
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Thioredoxin
Location	chr2: 19042214 .. 19044200 (-)
RNA-Seq Expression	CsaV3_2G029120
Synteny	CsaV3_2G029120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACTTAAATAATTTGCATTCACATTTTTGCCGTATGCTCTCACGTATAGACAATTCTGTCCACACGGCCACCCCAAGTGTATTCCTCTTTGATTGGTCTACATAAATCCTCCCCCCTCCTCGTCTCTCTTTATCGATTCCTTTTCAAACGCAGCGTAAACTTTTGCAGAAGGACACAGATTCTTGTTAGAATCAATGGCTAAAGAAGGGGAAGTGATTGCAATTCACAGCGTTGAGGAATTCGACGCGCAAGTACGCATAGGAAAGGAAATGAGTAAAGTGGTATGATTTTCGCACTCTCCCTTTCTACTTCCGTTCGATACATTTTCGTATGTGATTTCGGTGGAATTTTGGATTTGATGCTTAGGTATATTGGAACATCTTTCATATCTTAACAATTTCTGTTGCATTTTTGGTTATTGTTAGAGTTTCTTCTGTTCGGTAATTTGGGAAAACTCGCGATTGATTCGTCGTTAGGGGTTTATGATATCTATGTTTGATTGTGTCTAGTTATTCGTTTAAGTTCTTCAAGTTTGACTAGTTATATATTCCATTTGGAGTGTTGAAATTGCTAATAGGACGAATAGTCGAATGTTTTGATTTATCGTTCTCTTCAATTTTTCTCTGTTACTCGTTTCCTGTCTTTTTAGAACAAGTCTTTGGAATACTTCACCTTGTTATAGATAGTTTCAGCTCTGTTGTTCCTGCTGATGTTTCTAGAATTTTGTTTGGTAGATTGTGGTGGATTTTACTGCTTCTTGGTGTCCACCATGCCGCTTCATAGCTCCAATATTCGCAGACTTGGCTAAGAAGAACCACCATGCCATTTTCCTGAAAGTGGACGTTGATGAAGTTCAAGTAAAGAAATTTATCCCATTTTCAACTTTTCCCAAACTATCGTATTATGCCCTCTTGATACAGTGGAATGGAACTGGTTTGTTGATTTGATCTTTTCTCTCTCTCTCAAACAATGGCCCCTTTGTCTTTGCAGGCAATTGCTGCGAGGTTCGACGTTGAAGCAATGCCGACCTTTGCTTTCGTGAGAGATGAGGTGGAAGTTAGCTCTCACAAGATCGTCGGTGCTGAAAAAGATAGGCTGATACAGTTGGTATCTGAGTTGTGCGGTCCAGTTCCATCAACTCCTAAGGCATAAATGGTCAGCTCGGAAGCTCATTTTGCCTCTTATTATTATGGTGCATTGTTGATGATTCTGATTTCGAGTTTTTTCATGGATTTCATGACAATATGTCTGAGATGTGTACTTGTTTAATAAACGTTTGTAGAATAATAAATATACAATAAGATTTAATATATAAATTAGCTGTTTGAGCTTTTGAATTAAGTAGTGGGTTGAAAGTTTATAGATGCTTTCTTTTGTGTTGATAGAAGAAAGAGAAGGAACATCCAAAAAAGCAGTCTCCCTTGGCTTTGGGAAGTCTTCAGAAAGATGTAAGACTTGTAAGTTTTATGGTTGCTTGAAATTCTCATGTTTTGTGTTTGGTTGTCAGTGATGTGTTATGCTTAATCAAAGTTAGATATAATCTAAAATTTTGACGGACTTGTCAAATGGAAGAACATATAGATGTTTGCATCGGGGTGGTTGACCATCTAAATAATGCTAACTATCAAACCCAACAGTTTGGCCTCAACTTTGAGTTGGTTTGATAGTTAGATTGCTTTATGTTTGAGTTGATCCAATTCAACTTGAATTTTTATTGTTATTTATACATATAGGACTTTTGTTCTATATTGTTACCATATCTTGTTAAAGCTCGACTGATTCATGTACACTCATAGTTTCCATCCGTTGGAATAAACATAAAAGTAATTAGGAAAAAAGATAAAGTTTGAGGGTGGGGGTAATGGAATAATTTATTCCTAAGCATCTTTTGTATCCATACATTATGGCTCTTTTCCTTTCACTTTTATGATTCAATATTCTTGCCAGAATTATTTTATTTTATTTTATTACATACTGAATTTAAG

mRNA sequence

ATGGCTAAAGAAGGGGAAGTGATTGCAATTCACAGCGTTGAGGAATTCGACGCGCAAGTACGCATAGGAAAGGAAATGAGTAAAGTGATTGTGGTGGATTTTACTGCTTCTTGGTGTCCACCATGCCGCTTCATAGCTCCAATATTCGCAGACTTGGCTAAGAAGAACCACCATGCCATTTTCCTGAAAGTGGACGTTGATGAAGTTCAAGCAATTGCTGCGAGGTTCGACGTTGAAGCAATGCCGACCTTTGCTTTCGTGAGAGATGAGGTGGAAGTTAGCTCTCACAAGATCGTCGGTGCTGAAAAAGATAGGCTGATACAGTTGGTATCTGAGTTGTGCGGTCCAGTTCCATCAACTCCTAAGGCATAA

Coding sequence (CDS)

ATGGCTAAAGAAGGGGAAGTGATTGCAATTCACAGCGTTGAGGAATTCGACGCGCAAGTACGCATAGGAAAGGAAATGAGTAAAGTGATTGTGGTGGATTTTACTGCTTCTTGGTGTCCACCATGCCGCTTCATAGCTCCAATATTCGCAGACTTGGCTAAGAAGAACCACCATGCCATTTTCCTGAAAGTGGACGTTGATGAAGTTCAAGCAATTGCTGCGAGGTTCGACGTTGAAGCAATGCCGACCTTTGCTTTCGTGAGAGATGAGGTGGAAGTTAGCTCTCACAAGATCGTCGGTGCTGAAAAAGATAGGCTGATACAGTTGGTATCTGAGTTGTGCGGTCCAGTTCCATCAACTCCTAAGGCATAA

Protein sequence

MAKEGEVIAIHSVEEFDAQVRIGKEMSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAIFLKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPSTPKA*

Homology

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BLAST of CsaV3_2G029120 vs. NCBI nr
Match: XP_004152675.2 (thioredoxin H1-like [Cucumis sativus] >KGN62637.1 hypothetical protein Csa_021900 [Cucumis sativus])

HSP 1 Score: 246.9 bits (629), Expect = 9.1e-62
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MAKEGEVIAIHSVEEFDAQVRIGKEMSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAI 60
           MAKEGEVIAIHSVEEFDAQVRIGKEMSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAI
Sbjct: 1   MAKEGEVIAIHSVEEFDAQVRIGKEMSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAI 60

Query: 61  FLKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPST 120
           FLKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPST
Sbjct: 61  FLKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPST 120

Query: 121 PKA 124
           PKA
Sbjct: 121 PKA 123

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BLAST of CsaV3_2G029120 vs. NCBI nr
Match: XP_004152672.3 (thioredoxin H1 [Cucumis sativus] >KAE8652116.1 hypothetical protein Csa_022569 [Cucumis sativus])

HSP 1 Score: 204.1 bits (518), Expect = 6.8e-49
Identity = 100/123 (81.30%), Postives = 112/123 (91.06%), Query Frame = 0


Query: 1   MAKEGEVIAIHSVEEFDAQVRIGKEMSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAI 60
           MA+EG+VI IH+V+EFD QVRIGKE  K+IVVDFTASWCPPCRFIAPIFA+LAKKN HAI
Sbjct: 1   MAEEGQVIGIHNVKEFDEQVRIGKEARKLIVVDFTASWCPPCRFIAPIFAELAKKNPHAI 60

Query: 61  FLKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPST 120
           FLKVDVDEVQAIAARF+V+AMPTFAFVRDEVEVSSH+IVGA+K+ L+  V ELCGPVPST
Sbjct: 61  FLKVDVDEVQAIAARFNVDAMPTFAFVRDEVEVSSHRIVGADKNGLMDKVIELCGPVPST 120

Query: 121 PKA 124
             A
Sbjct: 121 STA 123

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BLAST of CsaV3_2G029120 vs. NCBI nr
Match: KAA0065199.1 (thioredoxin H-type 1 [Cucumis melo var. makuwa])

HSP 1 Score: 179.9 bits (455), Expect = 1.4e-41
Identity = 91/120 (75.83%), Postives = 101/120 (84.17%), Query Frame = 0


Query: 1   MAKEGEVIAIHSVEEFDAQVRIGKEMSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAI 60
           MA+EG+VI IHSVEEFDA V  GKE  K+IVVDFTASWCPPCRFIAP+FA+LAK   H I
Sbjct: 1   MAEEGQVIGIHSVEEFDALVLKGKETGKLIVVDFTASWCPPCRFIAPVFAELAKTYPHVI 60

Query: 61  FLKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPST 120
           FLKVDVDEVQ IAARF VEAMPTFAFV+D  EVS+ +IVGA+K  L + VSELCGPVPST
Sbjct: 61  FLKVDVDEVQPIAARFKVEAMPTFAFVKDGEEVSARRIVGADKVGLGRNVSELCGPVPST 120

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BLAST of CsaV3_2G029120 vs. NCBI nr
Match: XP_008444760.1 (PREDICTED: thioredoxin H-type 1 [Cucumis melo])

HSP 1 Score: 179.1 bits (453), Expect = 2.3e-41
Identity = 92/123 (74.80%), Postives = 101/123 (82.11%), Query Frame = 0


Query: 1   MAKEGEVIAIHSVEEFDAQVRIGKEMSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAI 60
           MA+EG+VI IHSVEEFDA V  GKE  K+IVVDFTASWCPPCRFIAP+FA+LAK   H I
Sbjct: 1   MAEEGQVIGIHSVEEFDALVLKGKETGKLIVVDFTASWCPPCRFIAPVFAELAKTYPHVI 60

Query: 61  FLKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPST 120
           FLKVDVDEVQ IAARF VEAMPTFAFV+D  EVS  +IVGA+K  L + VSELCGPVPST
Sbjct: 61  FLKVDVDEVQPIAARFKVEAMPTFAFVKDGEEVSVRRIVGADKVGLGRNVSELCGPVPST 120

Query: 121 PKA 124
             A
Sbjct: 121 SVA 123

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BLAST of CsaV3_2G029120 vs. NCBI nr
Match: XP_038884374.1 (thioredoxin H-type-like [Benincasa hispida])

HSP 1 Score: 149.8 bits (377), Expect = 1.5e-32
Identity = 74/113 (65.49%), Postives = 91/113 (80.53%), Query Frame = 0


Query: 1   MAKEGEVIAIHSVEEFDAQVRIGKEMSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAI 60
           MA+EG+VI IH VEEFD  V++G E  K+IVVDFTASWCPPCRFIAPIFA+LAK N + I
Sbjct: 1   MAEEGQVIGIHKVEEFDTLVKLGNEAGKLIVVDFTASWCPPCRFIAPIFAELAKANVNVI 60

Query: 61  FLKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSEL 114
           FLKVDVDEV+ IA ++ V AMPTF F++DE E+  H+IVGA+K +L   V+EL
Sbjct: 61  FLKVDVDEVKEIAEKYGVNAMPTFVFLKDENEI--HRIVGADKVQLGNKVAEL 111

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BLAST of CsaV3_2G029120 vs. ExPASy Swiss-Prot
Match: Q0D840 (Thioredoxin H1 OS=Oryza sativa subsp. japonica OX=39947 GN=TRXH PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 3.3e-30
Identity = 64/122 (52.46%), Postives = 88/122 (72.13%), Query Frame = 0


Query: 2   AKEGEVIAIHSVEEFDAQVRIGKEMSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAIF 61
           A+EG VIA H+ +EFDAQ+   KE  KV+++DFTASWC PCRFIAP+FA+ AKK   A+F
Sbjct: 3   AEEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVF 62

Query: 62  LKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPSTP 121
           LKVDVDE++ +A +++VEAMPTF F++D  E  + K+VGA KD L   + +  G   ++ 
Sbjct: 63  LKVDVDELKEVAEKYNVEAMPTFLFIKDGAE--ADKVVGARKDDLQNTIVKHVGATAASA 122

Query: 122 KA 124
            A
Sbjct: 123 SA 122

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BLAST of CsaV3_2G029120 vs. ExPASy Swiss-Prot
Match: A2YIW7 (Thioredoxin H-type OS=Oryza sativa subsp. indica OX=39946 GN=TRXH PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 3.3e-30
Identity = 64/122 (52.46%), Postives = 88/122 (72.13%), Query Frame = 0


Query: 2   AKEGEVIAIHSVEEFDAQVRIGKEMSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAIF 61
           A+EG VIA H+ +EFDAQ+   KE  KV+++DFTASWC PCRFIAP+FA+ AKK   A+F
Sbjct: 3   AEEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVF 62

Query: 62  LKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPSTP 121
           LKVDVDE++ +A +++VEAMPTF F++D  E  + K+VGA KD L   + +  G   ++ 
Sbjct: 63  LKVDVDELKEVAEKYNVEAMPTFLFIKDGAE--ADKVVGARKDDLQNTIVKHVGATAASA 122

Query: 122 KA 124
            A
Sbjct: 123 SA 122

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BLAST of CsaV3_2G029120 vs. ExPASy Swiss-Prot
Match: P29449 (Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 3.6e-29
Identity = 62/119 (52.10%), Postives = 84/119 (70.59%), Query Frame = 0


Query: 2   AKEGEVIAIHSVEEFDAQVRIGKEMSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAIF 61
           ++EG+V   H VEE++   + G E  K++VVDFTASWC PCRFIAPI AD+AKK  H IF
Sbjct: 9   SEEGQVFGCHKVEEWNEYFKKGVETKKLVVVDFTASWCGPCRFIAPILADIAKKMPHVIF 68

Query: 62  LKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPST 121
           LKVDVDE++ ++A + VEAMPTF F++D  EV   ++VGA+K+ L Q + +   P   T
Sbjct: 69  LKVDVDELKTVSAEWSVEAMPTFVFIKDGKEVD--RVVGAKKEELQQTIVKHAAPATVT 125

[Close]

BLAST of CsaV3_2G029120 vs. ExPASy Swiss-Prot
Match: Q39241 (Thioredoxin H5 OS=Arabidopsis thaliana OX=3702 GN=TRX5 PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.4e-28
Identity = 61/119 (51.26%), Postives = 87/119 (73.11%), Query Frame = 0


Query: 1   MAKEGEVIAIHSVEEFDAQVRIGKEMSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAI 60
           MA EGEVIA H++E ++ +V+   E  K+IV+DFTASWCPPCRFIAP+FA++AKK  + +
Sbjct: 1   MAGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVV 60

Query: 61  FLKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPS 120
           F K+DVDE+QA+A  F VEAMPTF F+++   +   ++VGA KD + + + +  G V S
Sbjct: 61  FFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIID--RVVGAAKDEINEKLMKHGGLVAS 117

[Close]

BLAST of CsaV3_2G029120 vs. ExPASy Swiss-Prot
Match: Q42403 (Thioredoxin H3 OS=Arabidopsis thaliana OX=3702 GN=TRX3 PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.5e-27
Identity = 59/107 (55.14%), Postives = 80/107 (74.77%), Query Frame = 0


Query: 1   MAKEGEVIAIHSVEEFDAQVRIGKEMSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAI 60
           MA EGEVIA H+VE++  +++   E  K+IV+DFTA+WCPPCRFIAP+FADLAKK+   +
Sbjct: 1   MAAEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVV 60

Query: 61  FLKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLI 108
           F KVDVDE+  +A  F V+AMPTF F++ E E+    +VGA K+ +I
Sbjct: 61  FFKVDVDELNTVAEEFKVQAMPTFIFMK-EGEI-KETVVGAAKEEII 105

[Close]

BLAST of CsaV3_2G029120 vs. ExPASy TrEMBL
Match: A0A0A0LPD3 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G362500 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 4.4e-62
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MAKEGEVIAIHSVEEFDAQVRIGKEMSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAI 60
           MAKEGEVIAIHSVEEFDAQVRIGKEMSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAI
Sbjct: 1   MAKEGEVIAIHSVEEFDAQVRIGKEMSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAI 60

Query: 61  FLKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPST 120
           FLKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPST
Sbjct: 61  FLKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPST 120

Query: 121 PKA 124
           PKA
Sbjct: 121 PKA 123

[Close]

BLAST of CsaV3_2G029120 vs. ExPASy TrEMBL
Match: A0A0A0LLJ2 (Thioredoxin OS=Cucumis sativus OX=3659 GN=Csa_2G362505 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.4e-47
Identity = 98/123 (79.67%), Postives = 111/123 (90.24%), Query Frame = 0


Query: 1   MAKEGEVIAIHSVEEFDAQVRIGKEMSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAI 60
           MA+EG+VI IH+V+EFD QVRIGKE  K+IVVDFTASW PPCRFIAPIFA+LAKKN HAI
Sbjct: 1   MAEEGQVIGIHNVKEFDEQVRIGKEARKLIVVDFTASWRPPCRFIAPIFAELAKKNPHAI 60

Query: 61  FLKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPST 120
           FLKVDVDEV+AIAARF+V+AMPTFAFVRDEVEVSSH+IVGA+K+ L+  V ELCGPVPST
Sbjct: 61  FLKVDVDEVRAIAARFNVDAMPTFAFVRDEVEVSSHRIVGADKNGLMDKVIELCGPVPST 120

Query: 121 PKA 124
             A
Sbjct: 121 STA 123

[Close]

BLAST of CsaV3_2G029120 vs. ExPASy TrEMBL
Match: A0A5A7VIA6 (Thioredoxin H-type 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005360 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 6.6e-42
Identity = 91/120 (75.83%), Postives = 101/120 (84.17%), Query Frame = 0


Query: 1   MAKEGEVIAIHSVEEFDAQVRIGKEMSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAI 60
           MA+EG+VI IHSVEEFDA V  GKE  K+IVVDFTASWCPPCRFIAP+FA+LAK   H I
Sbjct: 1   MAEEGQVIGIHSVEEFDALVLKGKETGKLIVVDFTASWCPPCRFIAPVFAELAKTYPHVI 60

Query: 61  FLKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPST 120
           FLKVDVDEVQ IAARF VEAMPTFAFV+D  EVS+ +IVGA+K  L + VSELCGPVPST
Sbjct: 61  FLKVDVDEVQPIAARFKVEAMPTFAFVKDGEEVSARRIVGADKVGLGRNVSELCGPVPST 120

[Close]

BLAST of CsaV3_2G029120 vs. ExPASy TrEMBL
Match: A0A1S3BBV0 (thioredoxin H-type 1 OS=Cucumis melo OX=3656 GN=LOC103488008 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.1e-41
Identity = 92/123 (74.80%), Postives = 101/123 (82.11%), Query Frame = 0


Query: 1   MAKEGEVIAIHSVEEFDAQVRIGKEMSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAI 60
           MA+EG+VI IHSVEEFDA V  GKE  K+IVVDFTASWCPPCRFIAP+FA+LAK   H I
Sbjct: 1   MAEEGQVIGIHSVEEFDALVLKGKETGKLIVVDFTASWCPPCRFIAPVFAELAKTYPHVI 60

Query: 61  FLKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPST 120
           FLKVDVDEVQ IAARF VEAMPTFAFV+D  EVS  +IVGA+K  L + VSELCGPVPST
Sbjct: 61  FLKVDVDEVQPIAARFKVEAMPTFAFVKDGEEVSVRRIVGADKVGLGRNVSELCGPVPST 120

Query: 121 PKA 124
             A
Sbjct: 121 SVA 123

[Close]

BLAST of CsaV3_2G029120 vs. ExPASy TrEMBL
Match: A0A6J1CST8 (thioredoxin H-type 1-like OS=Momordica charantia OX=3673 GN=LOC111013893 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 2.0e-30
Identity = 69/123 (56.10%), Postives = 91/123 (73.98%), Query Frame = 0


Query: 1   MAKEGEVIAIHSVEEFDAQVRIGKEMSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAI 60
           MA+EG+VI +H+VE FD  ++ G E  K+IVVDFTASWCPPCRFIAPIFA+LAK +   I
Sbjct: 1   MAEEGQVIGVHNVEAFDDLLKKGTESGKLIVVDFTASWCPPCRFIAPIFAELAKAHIGVI 60

Query: 61  FLKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPST 120
           FLKVDVDEV+ ++ +F+V AMPTF F+++  EV + +IVGA+K  L + V  L  P  +T
Sbjct: 61  FLKVDVDEVKEVSEKFEVTAMPTFVFLKEGAEVKNSRIVGADKVELGKRVLALSAPAAAT 120

Query: 121 PKA 124
             A
Sbjct: 121 SAA 123

[Close]

BLAST of CsaV3_2G029120 vs. TAIR 10
Match: AT1G45145.1 (thioredoxin H-type 5 )

HSP 1 Score: 126.3 bits (316), Expect = 1.7e-29
Identity = 61/119 (51.26%), Postives = 87/119 (73.11%), Query Frame = 0


Query: 1   MAKEGEVIAIHSVEEFDAQVRIGKEMSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAI 60
           MA EGEVIA H++E ++ +V+   E  K+IV+DFTASWCPPCRFIAP+FA++AKK  + +
Sbjct: 1   MAGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVV 60

Query: 61  FLKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSELCGPVPS 120
           F K+DVDE+QA+A  F VEAMPTF F+++   +   ++VGA KD + + + +  G V S
Sbjct: 61  FFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIID--RVVGAAKDEINEKLMKHGGLVAS 117

[Close]

BLAST of CsaV3_2G029120 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 )

HSP 1 Score: 123.6 bits (309), Expect = 1.1e-28
Identity = 59/107 (55.14%), Postives = 80/107 (74.77%), Query Frame = 0


Query: 1   MAKEGEVIAIHSVEEFDAQVRIGKEMSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAI 60
           MA EGEVIA H+VE++  +++   E  K+IV+DFTA+WCPPCRFIAP+FADLAKK+   +
Sbjct: 1   MAAEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVV 60

Query: 61  FLKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLI 108
           F KVDVDE+  +A  F V+AMPTF F++ E E+    +VGA K+ +I
Sbjct: 61  FFKVDVDELNTVAEEFKVQAMPTFIFMK-EGEI-KETVVGAAKEEII 105

[Close]

BLAST of CsaV3_2G029120 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 )

HSP 1 Score: 114.8 bits (286), Expect = 5.1e-26
Identity = 54/111 (48.65%), Postives = 83/111 (74.77%), Query Frame = 0


Query: 2   AKEGEVIAIHSVEEFDAQVRIGKEMSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAIF 61
           ++EG+VIA H+VE ++ Q++   E   ++VVDFTASWC PCRFIAP FADLAKK  + +F
Sbjct: 3   SEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLF 62

Query: 62  LKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSE 113
           LKVD DE++++A+ + ++AMPTF F+++   +   K+VGA+KD L   +++
Sbjct: 63  LKVDTDELKSVASDWAIQAMPTFMFLKEGKILD--KVVGAKKDELQSTIAK 111

[Close]

BLAST of CsaV3_2G029120 vs. TAIR 10
Match: AT1G19730.1 (Thioredoxin superfamily protein )

HSP 1 Score: 114.4 bits (285), Expect = 6.6e-26
Identity = 60/106 (56.60%), Postives = 76/106 (71.70%), Query Frame = 0


Query: 2   AKEGEVIAIHSVEEFDAQVRIGKEMSKVIVVDFTASWCPPCRFIAPIFADLAKK-NHHAI 61
           A+EG+VI  H+ + +  Q+   KE +K+IV+DFTASWCPPCR IAPIF DLAKK    AI
Sbjct: 3   AEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAI 62

Query: 62  FLKVDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRL 107
           F KVDVDE+Q++A  F VEAMPTF F++    V   K+VGA K+ L
Sbjct: 63  FFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVD--KLVGANKEDL 106

[Close]

BLAST of CsaV3_2G029120 vs. TAIR 10
Match: AT3G17880.1 (tetraticopeptide domain-containing thioredoxin )

HSP 1 Score: 107.8 bits (268), Expect = 6.2e-24
Identity = 45/109 (41.28%), Postives = 81/109 (74.31%), Query Frame = 0


Query: 4   EGEVIAIHSVEEFDAQVRIGKEMSKVIVVDFTASWCPPCRFIAPIFADLAKKNHHAIFLK 63
           +GEVI+IHS  E +A+ +  K+ S+++++ FTA+WC PCR+++P++++LA ++   +FLK
Sbjct: 269 DGEVISIHSTSELEAKTKAAKKASRLLILYFTATWCGPCRYMSPLYSNLATQHSRVVFLK 328

Query: 64  VDVDEVQAIAARFDVEAMPTFAFVRDEVEVSSHKIVGAEKDRLIQLVSE 113
           VD+D+   +AA +++ ++PTF F+RD  EV   K+VGA+K  L Q +++
Sbjct: 329 VDIDKANDVAASWNISSVPTFCFIRDGKEVD--KVVGADKGSLEQKIAQ 375

The following BLAST results are available for this feature:

BLAST of CsaV3_2G029120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152675.2	9.1e-62	100.00	thioredoxin H1-like [Cucumis sativus] >KGN62637.1 hypothetical protein Csa_02190...	[more]
XP_004152672.3	6.8e-49	81.30	thioredoxin H1 [Cucumis sativus] >KAE8652116.1 hypothetical protein Csa_022569 [...	[more]
KAA0065199.1	1.4e-41	75.83	thioredoxin H-type 1 [Cucumis melo var. makuwa]	[more]
XP_008444760.1	2.3e-41	74.80	PREDICTED: thioredoxin H-type 1 [Cucumis melo]	[more]
XP_038884374.1	1.5e-32	65.49	thioredoxin H-type-like [Benincasa hispida]	[more]

BLAST of CsaV3_2G029120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0D840	3.3e-30	52.46	Thioredoxin H1 OS=Oryza sativa subsp. japonica OX=39947 GN=TRXH PE=1 SV=1	[more]
A2YIW7	3.3e-30	52.46	Thioredoxin H-type OS=Oryza sativa subsp. indica OX=39946 GN=TRXH PE=1 SV=1	[more]
P29449	3.6e-29	52.10	Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
Q39241	2.4e-28	51.26	Thioredoxin H5 OS=Arabidopsis thaliana OX=3702 GN=TRX5 PE=1 SV=1	[more]
Q42403	1.5e-27	55.14	Thioredoxin H3 OS=Arabidopsis thaliana OX=3702 GN=TRX3 PE=1 SV=1	[more]

BLAST of CsaV3_2G029120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPD3	4.4e-62	100.00	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G362500...	[more]
A0A0A0LLJ2	2.4e-47	79.67	Thioredoxin OS=Cucumis sativus OX=3659 GN=Csa_2G362505 PE=4 SV=1	[more]
A0A5A7VIA6	6.6e-42	75.83	Thioredoxin H-type 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G...	[more]
A0A1S3BBV0	1.1e-41	74.80	thioredoxin H-type 1 OS=Cucumis melo OX=3656 GN=LOC103488008 PE=4 SV=1	[more]
A0A6J1CST8	2.0e-30	56.10	thioredoxin H-type 1-like OS=Momordica charantia OX=3673 GN=LOC111013893 PE=4 SV...	[more]

BLAST of CsaV3_2G029120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G45145.1	1.7e-29	51.26	thioredoxin H-type 5	[more]
AT5G42980.1	1.1e-28	55.14	thioredoxin 3	[more]
AT3G51030.1	5.1e-26	48.65	thioredoxin H-type 1	[more]
AT1G19730.1	6.6e-26	56.60	Thioredoxin superfamily protein	[more]
AT3G17880.1	6.2e-24	41.28	tetraticopeptide domain-containing thioredoxin	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 77..88 score: 33.52 coord: 30..38 score: 53.21 coord: 38..47 score: 58.56
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..116 e-value: 2.2E-32 score: 113.5
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 1..118
None	No IPR available	PANTHER	PTHR10438:SF399	THIOREDOXIN	coord: 1..118
None	No IPR available	CDD	cd02947	TRX_family	coord: 14..110 e-value: 7.11567E-30 score: 101.096
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 9..111 e-value: 1.1E-23 score: 83.2
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 1..115 score: 12.779802
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 31..49
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 4..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G029120.1	CsaV3_2G029120.1	mRNA