CsaV3_2G028710 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_2G028710
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	B3 domain-containing protein
Location	chr2: 18840254 .. 18841121 (+)
RNA-Seq Expression	CsaV3_2G028710
Synteny	CsaV3_2G028710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATCCAAACGCGATGTCTTCGAGACTTTAGATCTTATCTCATTGTTCGCTTCTGATCCAGCAACGGATGGAAGCTCTTCTGAGACTCAAACTCCTGAGAATGATACGGAATCGCAGCTGTCGAGCGAGAAGAGGAATAACCCTTCTGGGTCTGATGATGCGCCAAGGACGGAGACGCGAAAACGAAAGGCGAGGGAGAAGAGTAATAATAACAATTCTCCTGGGTCGTCTGGTCGTAGGCCGAAGAAGGAGAGGCGAAAAGACGTAGTGTTTTCGAAGACGATTGAGATGCCACAGATGCTGAGAGATCGGATTGAAGAATTGGGTGGCTTTAACATCCAATTTGCGACTCAAAAGAGACTGCAAGACACTGACATGAACAAGAACCACGGTCGATTACTGATTCCTTTTAAAAAACTGGTGAATGATTTTGCATCAGAAGAGGAGAAGAGGCTGTTGAAGCAACATGATCAAGAGGATTTGAAAAACAAGAATGGAATGACAGTGTTGATAATTGATCCTCAGTTAAGAAACAGACAGATTGGGCTGAAAATGTGGAAGGTTGGGCAACACGAAAGCTATTGTCTGATGTCAAAGTGGAATTTGTTTGTCAAAGAGAATTCACTCGAAAGTGGAGATTACATCCAACTTTGGAGTTTTAGATCAGATAACGCTTTTATAGTTGGGCATGAAGCTCAACTGCCTATCAACTCCAATCTTTGCTTCGCTTTCGTTAAACTTGACATCTCGGAGGGAATTTTTAAATTTATTTGATGTAATTAATCTGTAAAGGATTCACTTCATTCAATTATTAATAGCATTAATTGTTCAATTGTTAATAGCATTAATAGTAAAATAACATTCT

mRNA sequence

ATGGAATCCAAACGCGATGTCTTCGAGACTTTAGATCTTATCTCATTGTTCGCTTCTGATCCAGCAACGGATGGAAGCTCTTCTGAGACTCAAACTCCTGAGAATGATACGGAATCGCAGCTGTCGAGCGAGAAGAGGAATAACCCTTCTGGGTCTGATGATGCGCCAAGGACGGAGACGCGAAAACGAAAGGCGAGGGAGAAGAGTAATAATAACAATTCTCCTGGGTCGTCTGGTCGTAGGCCGAAGAAGGAGAGGCGAAAAGACGTAGTGTTTTCGAAGACGATTGAGATGCCACAGATGCTGAGAGATCGGATTGAAGAATTGGGTGGCTTTAACATCCAATTTGCGACTCAAAAGAGACTGCAAGACACTGACATGAACAAGAACCACGGTCGATTACTGATTCCTTTTAAAAAACTGGTGAATGATTTTGCATCAGAAGAGGAGAAGAGGCTGTTGAAGCAACATGATCAAGAGGATTTGAAAAACAAGAATGGAATGACAGTGTTGATAATTGATCCTCAGTTAAGAAACAGACAGATTGGGCTGAAAATGTGGAAGGTTGGGCAACACGAAAGCTATTGTCTGATGTCAAAGTGGAATTTGTTTGTCAAAGAGAATTCACTCGAAAGTGGAGATTACATCCAACTTTGGAGTTTTAGATCAGATAACGCTTTTATAGTTGGGCATGAAGCTCAACTGCCTATCAACTCCAATCTTTGCTTCGCTTTCGTTAAACTTGACATCTCGGAGGGAATTTTTAAATTTATTTGA

Coding sequence (CDS)

ATGGAATCCAAACGCGATGTCTTCGAGACTTTAGATCTTATCTCATTGTTCGCTTCTGATCCAGCAACGGATGGAAGCTCTTCTGAGACTCAAACTCCTGAGAATGATACGGAATCGCAGCTGTCGAGCGAGAAGAGGAATAACCCTTCTGGGTCTGATGATGCGCCAAGGACGGAGACGCGAAAACGAAAGGCGAGGGAGAAGAGTAATAATAACAATTCTCCTGGGTCGTCTGGTCGTAGGCCGAAGAAGGAGAGGCGAAAAGACGTAGTGTTTTCGAAGACGATTGAGATGCCACAGATGCTGAGAGATCGGATTGAAGAATTGGGTGGCTTTAACATCCAATTTGCGACTCAAAAGAGACTGCAAGACACTGACATGAACAAGAACCACGGTCGATTACTGATTCCTTTTAAAAAACTGGTGAATGATTTTGCATCAGAAGAGGAGAAGAGGCTGTTGAAGCAACATGATCAAGAGGATTTGAAAAACAAGAATGGAATGACAGTGTTGATAATTGATCCTCAGTTAAGAAACAGACAGATTGGGCTGAAAATGTGGAAGGTTGGGCAACACGAAAGCTATTGTCTGATGTCAAAGTGGAATTTGTTTGTCAAAGAGAATTCACTCGAAAGTGGAGATTACATCCAACTTTGGAGTTTTAGATCAGATAACGCTTTTATAGTTGGGCATGAAGCTCAACTGCCTATCAACTCCAATCTTTGCTTCGCTTTCGTTAAACTTGACATCTCGGAGGGAATTTTTAAATTTATTTGA

Protein sequence

MESKRDVFETLDLISLFASDPATDGSSSETQTPENDTESQLSSEKRNNPSGSDDAPRTETRKRKAREKSNNNNSPGSSGRRPKKERRKDVVFSKTIEMPQMLRDRIEELGGFNIQFATQKRLQDTDMNKNHGRLLIPFKKLVNDFASEEEKRLLKQHDQEDLKNKNGMTVLIIDPQLRNRQIGLKMWKVGQHESYCLMSKWNLFVKENSLESGDYIQLWSFRSDNAFIVGHEAQLPINSNLCFAFVKLDISEGIFKFI*

Homology

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BLAST of CsaV3_2G028710 vs. NCBI nr
Match: XP_004152777.2 (putative B3 domain-containing protein At2g27410 [Cucumis sativus] >KAE8652107.1 hypothetical protein Csa_022429 [Cucumis sativus])

HSP 1 Score: 501.5 bits (1290), Expect = 4.3e-138
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0


Query: 1   MESKRDVFETLDLISLFASDPATDGSSSETQTPENDTESQLSSEKRNNPSGSDDAPRTET 60
           MESKRDVFETLDLISLFASDPATDGSSSETQTPENDTESQLSSEKRNNPSGSDDAPRTET
Sbjct: 1   MESKRDVFETLDLISLFASDPATDGSSSETQTPENDTESQLSSEKRNNPSGSDDAPRTET 60

Query: 61  RKRKAREKSNNNNSPGSSGRRPKKERRKDVVFSKTIEMPQMLRDRIEELGGFNIQFATQK 120
           RKRKAREKSNNNNSPGSSGRRPKKERRKDVVFSKTIEMPQMLRDRIEELGGFNIQFATQK
Sbjct: 61  RKRKAREKSNNNNSPGSSGRRPKKERRKDVVFSKTIEMPQMLRDRIEELGGFNIQFATQK 120

Query: 121 RLQDTDMNKNHGRLLIPFKKLVNDFASEEEKRLLKQHDQEDLKNKNGMTVLIIDPQLRNR 180
           RLQDTDMNKNHGRLLIPFKKLVNDFASEEEKRLLKQHDQEDLKNKNGMTVLIIDPQLRNR
Sbjct: 121 RLQDTDMNKNHGRLLIPFKKLVNDFASEEEKRLLKQHDQEDLKNKNGMTVLIIDPQLRNR 180

Query: 181 QIGLKMWKVGQHESYCLMSKWNLFVKENSLESGDYIQLWSFRSDNAFIVGHEAQLPINSN 240
           QIGLKMWKVGQHESYCLMSKWNLFVKENSLESGDYIQLWSFRSDNAFIVGHEAQLPINSN
Sbjct: 181 QIGLKMWKVGQHESYCLMSKWNLFVKENSLESGDYIQLWSFRSDNAFIVGHEAQLPINSN 240

Query: 241 LCFAFVKLDISEGIFKFI 259
           LCFAFVKLDISEGIFKFI
Sbjct: 241 LCFAFVKLDISEGIFKFI 258

[Close]

BLAST of CsaV3_2G028710 vs. NCBI nr
Match: XP_008445565.1 (PREDICTED: B3 domain-containing protein At3g25182-like [Cucumis melo] >KAA0065235.1 B3 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 384.0 bits (985), Expect = 1.0e-102
Identity = 207/260 (79.62%), Postives = 225/260 (86.54%), Query Frame = 0


Query: 1   MESKRDVFETLDLISLFASDPATDGSSSETQTPENDTESQLSSEKRNNPSGSDD-APRTE 60
           MES   VF+TLDLISLFA D +TDGSS      E+DT SQ+SSEK  N SGSDD  PR E
Sbjct: 1   MESNNHVFKTLDLISLFAPDRSTDGSS------ESDTGSQISSEKSKNSSGSDDHKPRME 60

Query: 61  TRKRKAREK-SNNNNSPGSSGRRPKKERRKDVVFSKTIEMPQMLRDRIEELGGFNIQFAT 120
           TR+RKA EK   N+NSPGS   RPKKERRKD+VFSKTIEM  MLRDRI+EL GF+IQ+ T
Sbjct: 61  TRRRKASEKRKKNDNSPGSD-HRPKKERRKDMVFSKTIEMSAMLRDRIDELDGFDIQYVT 120

Query: 121 QKRLQDTDMNKNHGRLLIPFKKLVNDFASEEEKRLLKQHDQEDLKNKNGMTVLIIDPQLR 180
           QKRLQDTDMNKNHGRLLIPFKKL NDFASEEEK+LLKQHDQEDLKNKNGMTVLIIDPQLR
Sbjct: 121 QKRLQDTDMNKNHGRLLIPFKKLRNDFASEEEKQLLKQHDQEDLKNKNGMTVLIIDPQLR 180

Query: 181 NRQIGLKMWKVGQHESYCLMSKWNLFVKENSLESGDYIQLWSFRSDNAFIVGHEAQLPIN 240
           NR I LKMWKVGQH+SYCLMSKWN FV+ENSLESGDYIQLWSFRS+N FIVGH++Q+P+N
Sbjct: 181 NRHIELKMWKVGQHDSYCLMSKWNSFVQENSLESGDYIQLWSFRSNNIFIVGHQSQVPVN 240

Query: 241 SNLCFAFVKLDISEGIFKFI 259
           SNLCFA VKLDISEGIFKFI
Sbjct: 241 SNLCFALVKLDISEGIFKFI 253

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BLAST of CsaV3_2G028710 vs. NCBI nr
Match: XP_022144152.1 (B3 domain-containing protein At2g31420-like [Momordica charantia])

HSP 1 Score: 207.6 bits (527), Expect = 1.3e-49
Identity = 109/190 (57.37%), Postives = 134/190 (70.53%), Query Frame = 0


Query: 69  SNNNNSPGSSGRRPKKERRKDVVFSKTIEMPQMLRDRIEELGGFNIQFATQKRLQDTDMN 128
           ++NN+    +    KK ++ +VVFS TIEMP  LRDRI ELGG++IQ   QKRLQDTD+N
Sbjct: 23  TDNNDMSKVNKNDQKKHKQLEVVFSSTIEMPAXLRDRIAELGGYDIQIVIQKRLQDTDLN 82

Query: 129 KNHGRLLIPFKKLVNDFASEEEKRLLKQHDQEDLKNKNGMTVLIIDPQLRNRQIGLKMWK 188
           +NHGRL IP KKL+NDF +EEEK+LL Q D E   NKNG+  LI+DP LR   I LK WK
Sbjct: 83  RNHGRLSIPIKKLLNDFTTEEEKQLLDQQD-EHQNNKNGVXALILDPCLRESTIHLKKWK 142

Query: 189 VGQHESYCLMSKWNLFVKENSLESGDYIQLWSFRSDNAFIVGHEAQLPINSNLCFAFVKL 248
           +G  E YCL+S+WN   ++NSLESGD+IQLWSFR ++     H         LCFA VKL
Sbjct: 143 IGSREIYCLVSQWNSLAQKNSLESGDFIQLWSFRKNSGTPTPH---------LCFALVKL 202

Query: 249 DISEGIFKFI 259
           DISEGIF+FI
Sbjct: 203 DISEGIFRFI 202

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BLAST of CsaV3_2G028710 vs. NCBI nr
Match: KAG6598443.1 (B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 206.5 bits (524), Expect = 2.9e-49
Identity = 111/200 (55.50%), Postives = 143/200 (71.50%), Query Frame = 0


Query: 60  TRKRKAREKSNNNNSPGSSGRRPKKERRKDVVFSKTIEMPQMLRDRIEELGGFNIQFATQ 119
           T KRK R+  +           P+++RR+++VFS T+EMP  LR+RIE +GG ++Q  TQ
Sbjct: 21  TNKRKNRDCDD----------EPRRKRRREMVFSSTVEMPAALRERIEAMGGTDVQLVTQ 80

Query: 120 KRLQDTDMNKNHGRLLIPFKKLVNDFASEEEKRLLKQHDQEDLKNKNGMTVLIIDPQLRN 179
           K+LQ++D NKNHGRLLIP KKL+NDFA+EEE  L+ Q ++ D + + GM V IID  LR 
Sbjct: 81  KQLQESDRNKNHGRLLIPTKKLMNDFATEEEAELMMQ-EEVDRRRRIGMQVAIIDSALRE 140

Query: 180 RQIGLKMWKVGQHESYCLMSKWNLFVKENSLESGDYIQLWSFRS-DNAFIVGHEAQLPIN 239
             IGLK+WK+G   +YCL S+WN F ++NSLESGDYIQLWSFRS +NAFIV        +
Sbjct: 141 SVIGLKLWKIGSGHNYCLASRWNSFAEQNSLESGDYIQLWSFRSNNNAFIVN-------D 200

Query: 240 SNLCFAFVKLDISEGIFKFI 259
            +LCFA VKLDISEGIF FI
Sbjct: 201 HSLCFALVKLDISEGIFNFI 202

[Close]

BLAST of CsaV3_2G028710 vs. NCBI nr
Match: XP_023546349.1 (B3 domain-containing protein At1g05920-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 206.1 bits (523), Expect = 3.7e-49
Identity = 111/202 (54.95%), Postives = 142/202 (70.30%), Query Frame = 0


Query: 59  ETRKRKAREKSNNNNSPGSSGRRPKKERRKDVVFSKTIEMPQMLRDRIEELGGFNIQFAT 118
           +T KRK R+  +           PK++RR+++VFS T+EMP  LR+RIE +GG ++Q  T
Sbjct: 40  DTNKRKNRDCDD----------EPKRKRRREMVFSSTVEMPAALRERIEAMGGTDVQLVT 99

Query: 119 QKRLQDTDMNKNHGRLLIPFKKLVNDFASEEEKRLLKQHDQEDLKNKN-GMTVLIIDPQL 178
           QK+LQ++D NKNHGRLLIP KKL+NDFA+EEE  L+ Q + +  + +  GM V IID  L
Sbjct: 100 QKQLQESDRNKNHGRLLIPTKKLMNDFATEEEAELMMQEEVDRRRRRRIGMQVAIIDSAL 159

Query: 179 RNRQIGLKMWKVGQHESYCLMSKWNLFVKENSLESGDYIQLWSFRS-DNAFIVGHEAQLP 238
           R   IGLK+WK+G   +YCL S+WN F ++NSLESGDYIQLWSFRS +NAFIV       
Sbjct: 160 RETVIGLKLWKIGSGHNYCLASRWNSFAEQNSLESGDYIQLWSFRSNNNAFIVN------ 219

Query: 239 INSNLCFAFVKLDISEGIFKFI 259
            +  LCFA VKLDISEGIF FI
Sbjct: 220 -DHTLCFALVKLDISEGIFNFI 224

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BLAST of CsaV3_2G028710 vs. ExPASy Swiss-Prot
Match: Q9MA32 (B3 domain-containing protein At1g05930 OS=Arabidopsis thaliana OX=3702 GN=At1g05930 PE=2 SV=2)

HSP 1 Score: 68.2 bits (165), Expect = 1.6e-10
Identity = 49/158 (31.01%), Postives = 78/158 (49.37%), Query Frame = 0


Query: 92  FSKTI-EMPQMLRDRIEELGGFNIQFATQKRLQDTD-MNKNHGRLLIPFKKLV-NDFASE 151
           +S+T  EM   LR  ++++   ++    +K L  TD +   HGR  + F +L+ NDF   
Sbjct: 153 YSRTAREMRWWLRQVMKDMRAEDLTLILEKTLSTTDVITTTHGRFSMHFNRLISNDFLKP 212

Query: 152 EEKRLLKQHDQEDLKNKNGMTVLIIDPQLRNRQIGLKMWKVGQHESYCLMSKWNLFVKEN 211
           EE+ +L++    D     G+  +++D + +   + LK W     ++Y L   WN  VK N
Sbjct: 213 EERSILEEDTYND--ETMGVGAILVDQRSQKWSVILKRW----GQNYFLSCGWNDVVKAN 272

Query: 212 SLESGDYIQLWSFRSDNAFIVGHEAQLPINSNLCFAFV 247
            L++GD I LW+FR D        A       LCFA V
Sbjct: 273 KLKAGDDICLWAFRCDGVLCF---AMRQWRGILCFALV 301

[Close]

BLAST of CsaV3_2G028710 vs. ExPASy Swiss-Prot
Match: Q5RM09 (B3 domain-containing protein At1g05920 OS=Arabidopsis thaliana OX=3702 GN=At1g05920 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 4.6e-10
Identity = 50/175 (28.57%), Postives = 82/175 (46.86%), Query Frame = 0


Query: 81  RPKKERRKDVVFSKTIEMPQMLRDRIEELGGF-NIQFATQKRLQDTDMNKNHGRLLIPFK 140
           R KK    + V  K  + PQ L   +  + G  + +   +K L   D++    RL IP  
Sbjct: 146 RRKKTTSYEFVPPKHPQEPQWLLQVMSRMNGAGDPKLIIEKNLDSNDVDPRQNRLSIPIN 205

Query: 141 KLV-NDFASEEEKRLLKQHDQEDLKNKN--GMTVLIIDPQLRNRQIGLKMWKV-----GQ 200
            ++ NDF + +E RL+   D++++ N+   G+   ++D + +   +G K W +       
Sbjct: 206 TVIQNDFLTLDESRLI---DEDEITNEGNMGVAAFLVDQRTKKWNMGFKQWFMTTDSGSS 265

Query: 201 HESYCLMSKWNLFVKENSLESGDYIQLWSFRSDNAFIVGHEAQLPINSNLCFAFV 247
           + S+ L  +W+  V+ N L+ GD I LWSFRS              N  LCFA V
Sbjct: 266 YWSFVLRGEWSNVVETNGLKEGDKISLWSFRS--------------NDILCFALV 303

[Close]

BLAST of CsaV3_2G028710 vs. ExPASy Swiss-Prot
Match: Q9SCJ8 (Putative B3 domain-containing protein At3g49610 OS=Arabidopsis thaliana OX=3702 GN=At3g49610 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.3e-09
Identity = 59/195 (30.26%), Postives = 94/195 (48.21%), Query Frame = 0


Query: 52  SDDAPRTETRKRKAREKSNNNNSPGS------------SGRRPKKERRKDVVFSKTIEMP 111
           +D+  RTET+    R   N+ +SP S            S  + KK +      +   E P
Sbjct: 132 TDEFERTETKSPTIR---NSQSSPSSCLMENTKRKRYQSSGKSKKPKFDPFSLTAARETP 191

Query: 112 QMLRDRIEELGGFN--IQFATQKRLQDTDMNKNHGRLLIPFKKLV-NDFASEEEKRLL-- 171
           + L D + ++ G    I+   +K L  TD+  +  RLLIPF KL+ NDF + EE R +  
Sbjct: 192 EWLLDVMRKMKGAEGPIKLIYEKTLTATDVKPSESRLLIPFNKLLRNDFLTPEESRAIAI 251

Query: 172 -KQHDQEDLKNKNGMTVLIIDPQLRNRQIGLKMWKVGQHES------YCLMSKWNLFVKE 223
            K+ ++ED K K G+  +I++   +   +   +W + + +S      Y L   WN  V  
Sbjct: 252 DKEEEEEDTK-KIGVKTIIVNQFSKEWSLRFLIWVMKKKKSGNGTLYYTLNRGWNGVVSG 311

[Close]

BLAST of CsaV3_2G028710 vs. ExPASy Swiss-Prot
Match: Q9FFX2 (B3 domain-containing protein At5g38490 OS=Arabidopsis thaliana OX=3702 GN=At5g38490 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.3e-08
Identity = 38/113 (33.63%), Postives = 67/113 (59.29%), Query Frame = 0


Query: 119 QKRLQDTDMNKNHGRLLIPFKKLV-NDFASEEEKRLLKQ---HDQEDLKNKNGMTVLIID 178
           ++ L  +D+N N  RLL+PF+KL+ NDF +  E R +++   +D+ED +N  G+  ++++
Sbjct: 241 ERTLFKSDVNSNLSRLLMPFQKLIRNDFLTPAECRAMQKDEDNDEEDDEN-IGVGTVLVN 300

Query: 179 PQLRNRQIGLKMWKVGQHE-----SYCLMSKWNLFVKENSLESGDYIQLWSFR 223
            + +   +  K+W + +       +Y L   WN  VK +SL+ GD I LW+FR
Sbjct: 301 QRFQKWGLRFKIWAMEKDSGHGTLNYTLNWGWNDVVKSSSLKVGDKISLWTFR 352

[Close]

BLAST of CsaV3_2G028710 vs. ExPASy Swiss-Prot
Match: Q9XIP5 (Putative B3 domain-containing protein At2g27410 OS=Arabidopsis thaliana OX=3702 GN=At2g27410 PE=3 SV=2)

HSP 1 Score: 50.4 bits (119), Expect = 3.4e-05
Identity = 46/185 (24.86%), Postives = 84/185 (45.41%), Query Frame = 0


Query: 42  SSEKRNNPSGSDDAPRTETRKRKAREKSNNNNSPGSSGRRPKKERRKDVVFSKTIEMPQM 101
           +S  +N   G + +P +   +R   ++  N        R+      ++ +  +T     +
Sbjct: 16  TSTTQNPNRGLEPSPSSYVTRRSKEKRPINVEKRSHKKRKIICPLEEEPI--QTTPPEWL 75

Query: 102 LRDRIEELGGFNIQFATQKRLQDTDMNKNHGRLLIPFKKL-VNDFASEEEKRLLKQHDQE 161
           L     E  G+N +  + ++L  TD+ K   RL +PFK++   DF +E+E R++  H+  
Sbjct: 76  LNVMRREENGYNPKLISTRQLYKTDLKKTEARLSVPFKQVKTPDFLTEDETRII--HENA 135

Query: 162 DLKNKNGMTVLIIDPQLRNRQIGLKMWKVGQHESYCLMSKWN--LFVKENSLESGDYIQL 221
                NG+ V  +DP+L    + L+ WK+  +  Y  +  W   L   +   +  D   L
Sbjct: 136 MKIRDNGVPVNFVDPELNKHVLELRKWKMKGNWIYVFVKGWKNVLDACKTLFKEDDVYPL 195

Query: 222 WSFRS 224
           WSFRS
Sbjct: 196 WSFRS 196

[Close]

BLAST of CsaV3_2G028710 vs. ExPASy TrEMBL
Match: A0A5A7VHB3 (B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005760 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 4.8e-103
Identity = 207/260 (79.62%), Postives = 225/260 (86.54%), Query Frame = 0


Query: 1   MESKRDVFETLDLISLFASDPATDGSSSETQTPENDTESQLSSEKRNNPSGSDD-APRTE 60
           MES   VF+TLDLISLFA D +TDGSS      E+DT SQ+SSEK  N SGSDD  PR E
Sbjct: 1   MESNNHVFKTLDLISLFAPDRSTDGSS------ESDTGSQISSEKSKNSSGSDDHKPRME 60

Query: 61  TRKRKAREK-SNNNNSPGSSGRRPKKERRKDVVFSKTIEMPQMLRDRIEELGGFNIQFAT 120
           TR+RKA EK   N+NSPGS   RPKKERRKD+VFSKTIEM  MLRDRI+EL GF+IQ+ T
Sbjct: 61  TRRRKASEKRKKNDNSPGSD-HRPKKERRKDMVFSKTIEMSAMLRDRIDELDGFDIQYVT 120

Query: 121 QKRLQDTDMNKNHGRLLIPFKKLVNDFASEEEKRLLKQHDQEDLKNKNGMTVLIIDPQLR 180
           QKRLQDTDMNKNHGRLLIPFKKL NDFASEEEK+LLKQHDQEDLKNKNGMTVLIIDPQLR
Sbjct: 121 QKRLQDTDMNKNHGRLLIPFKKLRNDFASEEEKQLLKQHDQEDLKNKNGMTVLIIDPQLR 180

Query: 181 NRQIGLKMWKVGQHESYCLMSKWNLFVKENSLESGDYIQLWSFRSDNAFIVGHEAQLPIN 240
           NR I LKMWKVGQH+SYCLMSKWN FV+ENSLESGDYIQLWSFRS+N FIVGH++Q+P+N
Sbjct: 181 NRHIELKMWKVGQHDSYCLMSKWNSFVQENSLESGDYIQLWSFRSNNIFIVGHQSQVPVN 240

Query: 241 SNLCFAFVKLDISEGIFKFI 259
           SNLCFA VKLDISEGIFKFI
Sbjct: 241 SNLCFALVKLDISEGIFKFI 253

[Close]

BLAST of CsaV3_2G028710 vs. ExPASy TrEMBL
Match: A0A1S3BCJ5 (B3 domain-containing protein At3g25182-like OS=Cucumis melo OX=3656 GN=LOC103488545 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 4.8e-103
Identity = 207/260 (79.62%), Postives = 225/260 (86.54%), Query Frame = 0


Query: 1   MESKRDVFETLDLISLFASDPATDGSSSETQTPENDTESQLSSEKRNNPSGSDD-APRTE 60
           MES   VF+TLDLISLFA D +TDGSS      E+DT SQ+SSEK  N SGSDD  PR E
Sbjct: 1   MESNNHVFKTLDLISLFAPDRSTDGSS------ESDTGSQISSEKSKNSSGSDDHKPRME 60

Query: 61  TRKRKAREK-SNNNNSPGSSGRRPKKERRKDVVFSKTIEMPQMLRDRIEELGGFNIQFAT 120
           TR+RKA EK   N+NSPGS   RPKKERRKD+VFSKTIEM  MLRDRI+EL GF+IQ+ T
Sbjct: 61  TRRRKASEKRKKNDNSPGSD-HRPKKERRKDMVFSKTIEMSAMLRDRIDELDGFDIQYVT 120

Query: 121 QKRLQDTDMNKNHGRLLIPFKKLVNDFASEEEKRLLKQHDQEDLKNKNGMTVLIIDPQLR 180
           QKRLQDTDMNKNHGRLLIPFKKL NDFASEEEK+LLKQHDQEDLKNKNGMTVLIIDPQLR
Sbjct: 121 QKRLQDTDMNKNHGRLLIPFKKLRNDFASEEEKQLLKQHDQEDLKNKNGMTVLIIDPQLR 180

Query: 181 NRQIGLKMWKVGQHESYCLMSKWNLFVKENSLESGDYIQLWSFRSDNAFIVGHEAQLPIN 240
           NR I LKMWKVGQH+SYCLMSKWN FV+ENSLESGDYIQLWSFRS+N FIVGH++Q+P+N
Sbjct: 181 NRHIELKMWKVGQHDSYCLMSKWNSFVQENSLESGDYIQLWSFRSNNIFIVGHQSQVPVN 240

Query: 241 SNLCFAFVKLDISEGIFKFI 259
           SNLCFA VKLDISEGIFKFI
Sbjct: 241 SNLCFALVKLDISEGIFKFI 253

[Close]

BLAST of CsaV3_2G028710 vs. ExPASy TrEMBL
Match: A0A0A0LL20 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361650 PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 3.1e-102
Identity = 212/258 (82.17%), Postives = 212/258 (82.17%), Query Frame = 0


Query: 1   MESKRDVFETLDLISLFASDPATDGSSSETQTPENDTESQLSSEKRNNPSGSDDAPRTET 60
           MESKRDVFETLDLISLFASDPATDGSSSETQTPENDTESQLSSEKRNNPSGSDDAPRTET
Sbjct: 1   MESKRDVFETLDLISLFASDPATDGSSSETQTPENDTESQLSSEKRNNPSGSDDAPRTET 60

Query: 61  RKRKAREKSNNNNSPGSSGRRPKKERRKDVVFSKTIEMPQMLRDRIEELGGFNIQFATQK 120
           RKRKAREKSNNNNSPGSSGRRPKKERRKDVVFSKTIEMPQMLRDRIEELGGFNIQFATQK
Sbjct: 61  RKRKAREKSNNNNSPGSSGRRPKKERRKDVVFSKTIEMPQMLRDRIEELGGFNIQFATQK 120

Query: 121 RLQDTDMNKNHGRLLIPFKKLVNDFASEEEKRLLKQHDQEDLKNKNGMTVLIIDPQLRNR 180
           RLQDTDMNKNHGRLLIPFKKLVNDFASEEEKRLLKQHDQEDLKNKNGMTVLIIDPQ    
Sbjct: 121 RLQDTDMNKNHGRLLIPFKKLVNDFASEEEKRLLKQHDQEDLKNKNGMTVLIIDPQ---- 180

Query: 181 QIGLKMWKVGQHESYCLMSKWNLFVKENSLESGDYIQLWSFRSDNAFIVGHEAQLPINSN 240
                                                     SDNAFIVGHEAQLPINSN
Sbjct: 181 ------------------------------------------SDNAFIVGHEAQLPINSN 212

Query: 241 LCFAFVKLDISEGIFKFI 259
           LCFAFVKLDISEGIFKFI
Sbjct: 241 LCFAFVKLDISEGIFKFI 212

[Close]

BLAST of CsaV3_2G028710 vs. ExPASy TrEMBL
Match: A0A6J1CSV9 (B3 domain-containing protein At2g31420-like OS=Momordica charantia OX=3673 GN=LOC111013909 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 6.2e-50
Identity = 109/190 (57.37%), Postives = 134/190 (70.53%), Query Frame = 0


Query: 69  SNNNNSPGSSGRRPKKERRKDVVFSKTIEMPQMLRDRIEELGGFNIQFATQKRLQDTDMN 128
           ++NN+    +    KK ++ +VVFS TIEMP  LRDRI ELGG++IQ   QKRLQDTD+N
Sbjct: 23  TDNNDMSKVNKNDQKKHKQLEVVFSSTIEMPAXLRDRIAELGGYDIQIVIQKRLQDTDLN 82

Query: 129 KNHGRLLIPFKKLVNDFASEEEKRLLKQHDQEDLKNKNGMTVLIIDPQLRNRQIGLKMWK 188
           +NHGRL IP KKL+NDF +EEEK+LL Q D E   NKNG+  LI+DP LR   I LK WK
Sbjct: 83  RNHGRLSIPIKKLLNDFTTEEEKQLLDQQD-EHQNNKNGVXALILDPCLRESTIHLKKWK 142

Query: 189 VGQHESYCLMSKWNLFVKENSLESGDYIQLWSFRSDNAFIVGHEAQLPINSNLCFAFVKL 248
           +G  E YCL+S+WN   ++NSLESGD+IQLWSFR ++     H         LCFA VKL
Sbjct: 143 IGSREIYCLVSQWNSLAQKNSLESGDFIQLWSFRKNSGTPTPH---------LCFALVKL 202

Query: 249 DISEGIFKFI 259
           DISEGIF+FI
Sbjct: 203 DISEGIFRFI 202

[Close]

BLAST of CsaV3_2G028710 vs. ExPASy TrEMBL
Match: A0A6J1HD06 (B3 domain-containing protein At1g05920-like OS=Cucurbita moschata OX=3662 GN=LOC111462959 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 5.3e-49
Identity = 110/202 (54.46%), Postives = 142/202 (70.30%), Query Frame = 0


Query: 59  ETRKRKAREKSNNNNSPGSSGRRPKKERRKDVVFSKTIEMPQMLRDRIEELGGFNIQFAT 118
           +T KRK R+  +           P+++RR+++VFS T+EMP  LR RIE +GG ++Q  T
Sbjct: 20  DTNKRKNRDCDD----------EPRRKRRREMVFSSTVEMPAALRQRIEAMGGTDVQLVT 79

Query: 119 QKRLQDTDMNKNHGRLLIPFKKLVNDFASEEEKRLLKQHDQEDLKNKN-GMTVLIIDPQL 178
           QK+LQ++D NKNHGRLLIP KKL+NDFA+EEE  L+ Q + +  + +  GM V IID  L
Sbjct: 80  QKQLQESDRNKNHGRLLIPTKKLMNDFATEEEAELMMQEEVDRRRRRRIGMQVAIIDAAL 139

Query: 179 RNRQIGLKMWKVGQHESYCLMSKWNLFVKENSLESGDYIQLWSFRS-DNAFIVGHEAQLP 238
           R   IGLK+WK+G   +YCL S+WN F ++NSLESGDYIQLWSFRS +NAFIV       
Sbjct: 140 RESVIGLKLWKIGSGHNYCLASRWNSFAEQNSLESGDYIQLWSFRSNNNAFIVN------ 199

Query: 239 INSNLCFAFVKLDISEGIFKFI 259
            + +LCFA VKLDISEGIF FI
Sbjct: 200 -DHSLCFALVKLDISEGIFNFI 204

[Close]

BLAST of CsaV3_2G028710 vs. TAIR 10
Match: AT1G05930.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 68.2 bits (165), Expect = 1.1e-11
Identity = 49/158 (31.01%), Postives = 78/158 (49.37%), Query Frame = 0


Query: 92  FSKTI-EMPQMLRDRIEELGGFNIQFATQKRLQDTD-MNKNHGRLLIPFKKLV-NDFASE 151
           +S+T  EM   LR  ++++   ++    +K L  TD +   HGR  + F +L+ NDF   
Sbjct: 153 YSRTAREMRWWLRQVMKDMRAEDLTLILEKTLSTTDVITTTHGRFSMHFNRLISNDFLKP 212

Query: 152 EEKRLLKQHDQEDLKNKNGMTVLIIDPQLRNRQIGLKMWKVGQHESYCLMSKWNLFVKEN 211
           EE+ +L++    D     G+  +++D + +   + LK W     ++Y L   WN  VK N
Sbjct: 213 EERSILEEDTYND--ETMGVGAILVDQRSQKWSVILKRW----GQNYFLSCGWNDVVKAN 272

Query: 212 SLESGDYIQLWSFRSDNAFIVGHEAQLPINSNLCFAFV 247
            L++GD I LW+FR D        A       LCFA V
Sbjct: 273 KLKAGDDICLWAFRCDGVLCF---AMRQWRGILCFALV 301

[Close]

BLAST of CsaV3_2G028710 vs. TAIR 10
Match: AT1G05920.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 66.6 bits (161), Expect = 3.3e-11
Identity = 50/175 (28.57%), Postives = 82/175 (46.86%), Query Frame = 0


Query: 81  RPKKERRKDVVFSKTIEMPQMLRDRIEELGGF-NIQFATQKRLQDTDMNKNHGRLLIPFK 140
           R KK    + V  K  + PQ L   +  + G  + +   +K L   D++    RL IP  
Sbjct: 146 RRKKTTSYEFVPPKHPQEPQWLLQVMSRMNGAGDPKLIIEKNLDSNDVDPRQNRLSIPIN 205

Query: 141 KLV-NDFASEEEKRLLKQHDQEDLKNKN--GMTVLIIDPQLRNRQIGLKMWKV-----GQ 200
            ++ NDF + +E RL+   D++++ N+   G+   ++D + +   +G K W +       
Sbjct: 206 TVIQNDFLTLDESRLI---DEDEITNEGNMGVAAFLVDQRTKKWNMGFKQWFMTTDSGSS 265

Query: 201 HESYCLMSKWNLFVKENSLESGDYIQLWSFRSDNAFIVGHEAQLPINSNLCFAFV 247
           + S+ L  +W+  V+ N L+ GD I LWSFRS              N  LCFA V
Sbjct: 266 YWSFVLRGEWSNVVETNGLKEGDKISLWSFRS--------------NDILCFALV 303

[Close]

BLAST of CsaV3_2G028710 vs. TAIR 10
Match: AT3G49610.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 64.3 bits (155), Expect = 1.6e-10
Identity = 59/195 (30.26%), Postives = 94/195 (48.21%), Query Frame = 0


Query: 52  SDDAPRTETRKRKAREKSNNNNSPGS------------SGRRPKKERRKDVVFSKTIEMP 111
           +D+  RTET+    R   N+ +SP S            S  + KK +      +   E P
Sbjct: 132 TDEFERTETKSPTIR---NSQSSPSSCLMENTKRKRYQSSGKSKKPKFDPFSLTAARETP 191

Query: 112 QMLRDRIEELGGFN--IQFATQKRLQDTDMNKNHGRLLIPFKKLV-NDFASEEEKRLL-- 171
           + L D + ++ G    I+   +K L  TD+  +  RLLIPF KL+ NDF + EE R +  
Sbjct: 192 EWLLDVMRKMKGAEGPIKLIYEKTLTATDVKPSESRLLIPFNKLLRNDFLTPEESRAIAI 251

Query: 172 -KQHDQEDLKNKNGMTVLIIDPQLRNRQIGLKMWKVGQHES------YCLMSKWNLFVKE 223
            K+ ++ED K K G+  +I++   +   +   +W + + +S      Y L   WN  V  
Sbjct: 252 DKEEEEEDTK-KIGVKTIIVNQFSKEWSLRFLIWVMKKKKSGNGTLYYTLNRGWNGVVSG 311

[Close]

BLAST of CsaV3_2G028710 vs. TAIR 10
Match: AT5G38490.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 60.5 bits (145), Expect = 2.4e-09
Identity = 38/113 (33.63%), Postives = 67/113 (59.29%), Query Frame = 0


Query: 119 QKRLQDTDMNKNHGRLLIPFKKLV-NDFASEEEKRLLKQ---HDQEDLKNKNGMTVLIID 178
           ++ L  +D+N N  RLL+PF+KL+ NDF +  E R +++   +D+ED +N  G+  ++++
Sbjct: 241 ERTLFKSDVNSNLSRLLMPFQKLIRNDFLTPAECRAMQKDEDNDEEDDEN-IGVGTVLVN 300

Query: 179 PQLRNRQIGLKMWKVGQHE-----SYCLMSKWNLFVKENSLESGDYIQLWSFR 223
            + +   +  K+W + +       +Y L   WN  VK +SL+ GD I LW+FR
Sbjct: 301 QRFQKWGLRFKIWAMEKDSGHGTLNYTLNWGWNDVVKSSSLKVGDKISLWTFR 352

[Close]

BLAST of CsaV3_2G028710 vs. TAIR 10
Match: AT2G27410.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 50.4 bits (119), Expect = 2.4e-06
Identity = 46/185 (24.86%), Postives = 84/185 (45.41%), Query Frame = 0


Query: 42  SSEKRNNPSGSDDAPRTETRKRKAREKSNNNNSPGSSGRRPKKERRKDVVFSKTIEMPQM 101
           +S  +N   G + +P +   +R   ++  N        R+      ++ +  +T     +
Sbjct: 16  TSTTQNPNRGLEPSPSSYVTRRSKEKRPINVEKRSHKKRKIICPLEEEPI--QTTPPEWL 75

Query: 102 LRDRIEELGGFNIQFATQKRLQDTDMNKNHGRLLIPFKKL-VNDFASEEEKRLLKQHDQE 161
           L     E  G+N +  + ++L  TD+ K   RL +PFK++   DF +E+E R++  H+  
Sbjct: 76  LNVMRREENGYNPKLISTRQLYKTDLKKTEARLSVPFKQVKTPDFLTEDETRII--HENA 135

Query: 162 DLKNKNGMTVLIIDPQLRNRQIGLKMWKVGQHESYCLMSKWN--LFVKENSLESGDYIQL 221
                NG+ V  +DP+L    + L+ WK+  +  Y  +  W   L   +   +  D   L
Sbjct: 136 MKIRDNGVPVNFVDPELNKHVLELRKWKMKGNWIYVFVKGWKNVLDACKTLFKEDDVYPL 195

Query: 222 WSFRS 224
           WSFRS
Sbjct: 196 WSFRS 196

The following BLAST results are available for this feature:

BLAST of CsaV3_2G028710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152777.2	4.3e-138	100.00	putative B3 domain-containing protein At2g27410 [Cucumis sativus] >KAE8652107.1 ...	[more]
XP_008445565.1	1.0e-102	79.62	PREDICTED: B3 domain-containing protein At3g25182-like [Cucumis melo] >KAA006523...	[more]
XP_022144152.1	1.3e-49	57.37	B3 domain-containing protein At2g31420-like [Momordica charantia]	[more]
KAG6598443.1	2.9e-49	55.50	B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023546349.1	3.7e-49	54.95	B3 domain-containing protein At1g05920-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_2G028710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9MA32	1.6e-10	31.01	B3 domain-containing protein At1g05930 OS=Arabidopsis thaliana OX=3702 GN=At1g05...	[more]
Q5RM09	4.6e-10	28.57	B3 domain-containing protein At1g05920 OS=Arabidopsis thaliana OX=3702 GN=At1g05...	[more]
Q9SCJ8	2.3e-09	30.26	Putative B3 domain-containing protein At3g49610 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9FFX2	3.3e-08	33.63	B3 domain-containing protein At5g38490 OS=Arabidopsis thaliana OX=3702 GN=At5g38...	[more]
Q9XIP5	3.4e-05	24.86	Putative B3 domain-containing protein At2g27410 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of CsaV3_2G028710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VHB3	4.8e-103	79.62	B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A1S3BCJ5	4.8e-103	79.62	B3 domain-containing protein At3g25182-like OS=Cucumis melo OX=3656 GN=LOC103488...	[more]
A0A0A0LL20	3.1e-102	82.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361650 PE=4 SV=1	[more]
A0A6J1CSV9	6.2e-50	57.37	B3 domain-containing protein At2g31420-like OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1HD06	5.3e-49	54.46	B3 domain-containing protein At1g05920-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of CsaV3_2G028710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05930.1	1.1e-11	31.01	Domain of unknown function (DUF313)	[more]
AT1G05920.1	3.3e-11	28.57	Domain of unknown function (DUF313)	[more]
AT3G49610.1	1.6e-10	30.26	Domain of unknown function (DUF313)	[more]
AT5G38490.1	2.4e-09	33.63	Domain of unknown function (DUF313)	[more]
AT2G27410.1	2.4e-06	24.86	Domain of unknown function (DUF313)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005508	B3 domain-containing protein At2g31720-like	PFAM	PF03754	DUF313	coord: 97..206 e-value: 6.8E-19 score: 68.2
IPR005508	B3 domain-containing protein At2g31720-like	PANTHER	PTHR31541	B3 DOMAIN PLANT PROTEIN-RELATED	coord: 41..248
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 112..236 e-value: 3.9E-18 score: 67.3
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 119..226
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..69
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..93
None	No IPR available	PANTHER	PTHR31541:SF25	DOMAIN PROTEIN, PUTATIVE (DUF313)-RELATED	coord: 41..248

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G028710.1	CsaV3_2G028710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding