CsaV3_2G026040 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_2G026040
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial
Location	chr2: 17904626 .. 17910388 (-)
RNA-Seq Expression	CsaV3_2G026040
Synteny	CsaV3_2G026040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTGACAATAAAACATACAACTTTCCCTTTTTCCTTTGGGGCAAATTTCATAAAAATCTATGGACTAAAGAATATTTCAAATTTTCCACATAGTTCCCTACAAACATCGGAATCCTTTGCGTGGTCGTCAAGCAGCAGATAGCAATCTCTAGTTATCTCAATCCAACGGCTAATATTGGTCCATCAGACGCAATCTCACCCATCCGATCCATCGAACCCCTTCGCTTCAATTTGCCACCCGACCCAGGCCCACTCCCACCTTCGAACTCAAAGGCCCGGCCCACAAAGTCATGGATCGTCTCTAGGCCCACGTAATACTTCCCAATTCCCGGCAACAAAGCCGAATGCAAATTGAAAAACTCTGTATAAGCCGGGAGTATCATCTTCAGAGTTGCCTCTTTCAACTGCTCCCGCAAATCCAAATCTGGGATGGAGTACGTCGCTCTATGTTTCTGTGAGAATTCTCTTAGTGCCTTCACGAATGATTCCATTTTTGTTTTCGCTAAATCTTCCACCGTTTCCATGTTCTGTAATCGCATGTCGTCCATGTCCATTACCGAAAGCAGAGGCTCCCAACATAGCATTTGATAAGTGTAAGCCGATTCTTCTGCTACTGCTTTGTAATTTTTTCGCATATACTGTTCACCTAGCAATCTTCCTAGTTCTGTGTTTCGGATCCGCATGTAGATGTACCAGTATGTGTTCATTGAGAAGATATGCGGTAGGATTTTGTCTCTATAGCGCGATTTTTTGGATTCCACGTTTCTTTGTAGGGCTTCCATTACGTTGGAGAAGGCGTCTTTAAGCAAATTCTCCTCCGCTTCCAATTTTGAGAGGAATCCGCCCTTCCACGACTTTTGTATTTGGAGAACTTTAGCCATGGCGGAACTGTAGTTGTCGCTTGCAAGGTACTTGAGGTAGTTGACGGCGTAACGGACTAGTTTAGGAACCGATCCGTCTTTTGGAGGTGGAAATCCGTCTGAATTTCCCTCGATTTGAAGGCCGAAATCCCAAAAAACTTTGCTGGATGCGTGCACGAGTAGCTTCTCGAGCTCTCTGTATCGTGTACGGATTTCGGCGCCGGCTTCGCCGCTAAATGCCTCAGAGAATTCGGAGTCGAGTTTTTCCATGGAGTCGAACATGTCCAAGAGCTTGAACAGTTTCTGCGGCTCTTTGGTGCTTCTGGCGACGCCTTCCCCAAACCGGAAGAAGACAGTCATAATTTTGTCTGCGATCTTGACGAAGCATTCAGGCCACATCAGTCCGTCCATGATTGAGCCTAAAACCTGATTACAAAGCTTCTTCTCAGAAATCAACACGCTCGTGGCTGCGACCTTGAAATGTTCAATCCATAGTGAAATTGCTGTCTCCAACTTTTCCCACTCCATTTTGTCAATTTCTTCTGGAGTGTAAGTTTTTAGATAGACTGGATTGAGCCGCATCAATGCGGTAGCTGCTCTCCTGTATCTAACCTGATTTATAGAACAGCGATAGTTATAGAATTTGTTGCACTTCTTTACTCAGTATTTTATTATCAGCCAAATCATAAACTTCCAATTTCAATCTCATTGGAGAAGAAGCCGTTTTTGACATAATGTTGCAATCGTAATAGAAAGAAATGTATTACAATGAAGATTTAATGAGTGGTCATCATTTAGAACAAGTTGGTATTCAAATGTCTCCATTTTGAATTAATAATTGTGAAGTTTTATGAATGTATTTATATTAATCCATTGAAGAACCACAAAATTTAAAGTAAATTGATATTTGTACAATTGTACTTATTATTATTATTTTTAGTTAAGTAAATGGTCATTACCTTGACGTAAATGTTGATGCAAATATCCAAACAATCGTTGGCGGTTAGAGTTTCAGCAATTCGTTTAGCAGCTTCGATCTCCAGCTCGCTTCCCATCTCAGACCCCACGGTTTCACCTTCCTTTTCTCCATCACCATCATCGAACTTCGGTTTTCTTTGATGCTTTAGATTCTTTAATATGTTTTCAAATTCATCTTGCAGATTCAGTAGAGATTCGTCAAGCAATCCCTCAAACTTCATGTCATCGATTTCAGTTTCGTAAAGAGCTTTGAGTGTGATCATCGTCTCTTTCAGTCTGTGTGTCCTTTGTGGATCGGCAGCCTTCGTCCTGCTCAAGAACTCCACCACTTCTTGGAGTTTCTGGATCACCGATTCCCCCTCTTGACTAATCACGCTTATGGCTGCATTCAGCCTATCCACACAGTTCACTAGTTTGATCAGCTTCTTCAGGCGTTCTTCCGGCGATTTTTCCACCGATAAGTTAGCGAAGATCGCGAGAATCTTGCGTTGGAGAAATTCGGATCGCTTAAAAGTATCAAGGAGATTGAGAGCAGGCGAAGCTGCTCGGTTGATTCTTGTTTCGAGGGCTTTTGTCGTCATCGCCAAAGATTGTAGAGGTAATATGCTTCTCGACGCTGTCGTGAGCGATTCGTCGATTGAATCTATGTTCTTCTCCATCCTCTCCAGGCTTTCGTTCAGTTCCGTCGACGCTTGAAGGAGGATTTTCAAATCCGAACATGCTGATTCAAGCTTCTGGATCCTTGAGTCCTCTTCTTCCCTTGGCGCCATTGTTACTACTCCTTGGCGCAGCTTCCAAAATCGTGAGAGATATAGGATCTACGACAAACACGATGCAGGTACGAAACATAATACGACGAGAAGAAATTCATTTTGCCAACTGGAGCGATGTAAACTAAGTTACAAAATGGCGTCTTCTTATCGAAAGCGGACAAAGTCATACTAAGAAGCTGAGAATATGCACAGCCGGTTGATGGCAACCCTTCGAGAACCAGTCCAAACGATCTCCTTAGCTCCATGTTTCTGATTCACATAAAGACATACATCACATCATCACGCTTCGTCGCGAACATACACAGTCAAATTTTGTCTCTCTGACGCCAACGTAATGCATTCGACGAGTTTTTGCAAGGTTTCCATCCCGCCGGCAAACGCGCCTTTGAGTAGATGCTCGTCTGTTTCGGAGTTAGATTCCATTCGATTCCGACCGTATTCTTCTGTTGGAAGAATCCCTACGATGGGCAAGCTCTACTCCACGCTGCAATACACAGTTAACTAGCATAATAATTACTAACTAATATTTTATTGTTTCTTTTAACATTCCATTTTTGTTCTTATCTATAAGCACCGTGGAGCAAGTTTCTTTTTCGAATGTTCTTGAAATTGTAGACGTGGCGTTGCTATTCGTTGCAAAGCATTTGAGAGGATAGCATTTTCTGGAAGCTTCGCGTTTTCTTGCAATTGAATGCAAATTTTATAAACCATTGGGAGGAAAATGTGATGGGAATAGAGGAATCTCGTCGTAAAGATGGCCAACCCTCTGCTGCATAGGTACAATTTTGATCGTTCAAGGCTATCAGCTTTTGTTCATTGTACACGATTGCTTTCTTCCGACTCCTTGGTTGAGGTCAAGCCAGGGGAGATCGGCATAGCGTCCGGCATTCCTGAAGAGCATCTCCATCGTCGGGTATGCCATTTCTAACGGTGAAATTAGTTGCTCTCTGTTTTGTTTTGTTTTAGATATATTGGACGATATTTTATTGAATTCAGGTTCTGTTGTATGGTTGCTTTTGAAGAATCTTAGAGAAAGAGCTGAATATGACAGTCAGATTAGAGTAAAAGTTGTCCTTTCTCAGGAAAACTTTGACAACTTTGCTGAATGAGTTTCATGGGTGTTGCCTGTGATATCGTGTTAAATAAACATGGAATTATATCTCAATTGCAGCAAGAGATTGCGAGGTCTTTCTTTTCTTTTCTTTTTTCTCATGTGTGATTCTCGACCATTGGAGTTTTGTTTGCTTTTGTTGCAGTAAGAGTGTTCCTTCATTATTAGGAGTGTTTAGAAATAGAAAGAGTTGGGAAGTTGAGGGAGAGATAACAATTGATACTGTAATTTCTCTTTCTTGTACTGCAATGCTTTATATTGTCCTCTTCTCACTTCTGATTGGTATTCTAACAAATTAAAATGAAGGAACTGATATTATAATGTTATAATGTTGTTACTGTCAGTATTTGAGTTTGTGGAAGAACTGATTGGATTCTCCTTTATGCATTCCAGGTTATAATCTACTCACCTGCTAGAACCGCCACACAACAAGGCTCTGGGAAAGTTGGGAAATGGAAAATTAATTTTCTCTCCACACACAAGTATGATTATCATCAATTGCAAGTCCCGGGCTGACTTCTCTGTTCACTTAATCTTTGTCGGATACCAACAGATACATATTGTATATTATTTTTGTTTCCATTCCTTGAATTACACATGATTTTATATTAGTCATCTACCATTTTTTTTCCTTAATGGCAAATCATTTATCATTTGCTCAATTGGATTTCGAATTTCGGGTTTTGTTCTCATGCCTTTTCAAGATAATTTAAAACTGAAGCAAGTATCAACAAGCAAGCTCGCTGAATATTTGTTCCATTTTCCCATAGCCATTCTAGATGTTGTGGATCAATATCCCTTTCTTATCTGGCCCCATTTGTTTAGGTGGGAAAATCCCTTGATGGGATGGACATCCACAGGAGACCCTTATGCTAATGTCGGTGATGCAGCCCTTAGTTTTGATAGTGCAGAAGCTGCAATGAGGTTTGCTGAAAAGCATGGCTGGCAATACGAGGTTACACTGAAATTTTCTTATCATTTACAATTGATACAGTTTTTGAGACTTCCTTTTACATAAGACTGGTACAGAAACAATATATTATTTGTAATCTGGTCGCTAACTGTCTTGAGAACTCCTATTGTAGGTTAAGAAGCGACAGACACCACTTCTTAAGGTAAAGTTATTGTTGATTAATTTCTGAAATCACTCTTTCACGATACCCCTTTCATCTATTCTCAGCATGTTATTGATAGACTATAAATAGATTTACAACTGCTTGAATTTTTTTGAAAACTGTATTCTTTTTCGTTTGTGTTTTGGTCCTCCTTTGTATTTTGGTTCTCCTTTTTCTTTGACAGGGCCAGTCGGAGTGATAATTCATACCCATTTACTCCTACTTGTTTTTTAACTGATTATAGGCTTCTTATTTTTTAATATTGTGCAGCCGAAGTCCTATGCAGACAACTTCAAATGGAAAGGACCACCGAGAGCTGAGGAAAATTAATTTGGAGGTTGAGGCATCCCAAGCAAGGAGCTGGCTGAGCTGTCAAGTGTGAGAATCTAATATTTAATACATTAGAATTTTAGGATGATTTTATATTTATAGTTTGTGTATAGAATATGTGAATTCTAGATCCTCTGCAACCTTTGTTCTGATTCTTGAGAGAATTTTTAGAGCATTTTAAATAAAAATTAATTTGTGAGTTGGGATGAAAAATCAGTCAAATTGGGAGAATGGGTCCTTTACACTTTGTATGACATCTATTTTTTTTCAAAATGTTCTGGGGGGCAAGTGTGACTAAACGCGTGATACCGACGTGGCTTTAGGAATAAAC

mRNA sequence

ATGGCCAACCCTCTGCTGCATAGGTACAATTTTGATCGTTCAAGGCTATCAGCTTTTGTTCATTGTACACGATTGCTTTCTTCCGACTCCTTGGTTGAGGTCAAGCCAGGGGAGATCGGCATAGCGTCCGGCATTCCTGAAGAGCATCTCCATCGTCGGGTTATAATCTACTCACCTGCTAGAACCGCCACACAACAAGGCTCTGGGAAAGTTGGGAAATGGAAAATTAATTTTCTCTCCACACACAAGTGGGAAAATCCCTTGATGGGATGGACATCCACAGGAGACCCTTATGCTAATGTCGGTGATGCAGCCCTTAGTTTTGATAGTGCAGAAGCTGCAATGAGGTTTGCTGAAAAGCATGGCTGGCAATACGAGGTTAAGAAGCGACAGACACCACTTCTTAAGCCGAAGTCCTATGCAGACAACTTCAAATGGAAAGGACCACCGAGAGCTGAGGAAAATTAA

Coding sequence (CDS)

ATGGCCAACCCTCTGCTGCATAGGTACAATTTTGATCGTTCAAGGCTATCAGCTTTTGTTCATTGTACACGATTGCTTTCTTCCGACTCCTTGGTTGAGGTCAAGCCAGGGGAGATCGGCATAGCGTCCGGCATTCCTGAAGAGCATCTCCATCGTCGGGTTATAATCTACTCACCTGCTAGAACCGCCACACAACAAGGCTCTGGGAAAGTTGGGAAATGGAAAATTAATTTTCTCTCCACACACAAGTGGGAAAATCCCTTGATGGGATGGACATCCACAGGAGACCCTTATGCTAATGTCGGTGATGCAGCCCTTAGTTTTGATAGTGCAGAAGCTGCAATGAGGTTTGCTGAAAAGCATGGCTGGCAATACGAGGTTAAGAAGCGACAGACACCACTTCTTAAGCCGAAGTCCTATGCAGACAACTTCAAATGGAAAGGACCACCGAGAGCTGAGGAAAATTAA

Protein sequence

MANPLLHRYNFDRSRLSAFVHCTRLLSSDSLVEVKPGEIGIASGIPEEHLHRRVIIYSPARTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEKHGWQYEVKKRQTPLLKPKSYADNFKWKGPPRAEEN*

Homology

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BLAST of CsaV3_2G026040 vs. NCBI nr
Match: XP_004142898.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Cucumis sativus] >KGN62438.1 hypothetical protein Csa_018679 [Cucumis sativus])

HSP 1 Score: 328.2 bits (840), Expect = 3.9e-86
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MANPLLHRYNFDRSRLSAFVHCTRLLSSDSLVEVKPGEIGIASGIPEEHLHRRVIIYSPA 60
           MANPLLHRYNFDRSRLSAFVHCTRLLSSDSLVEVKPGEIGIASGIPEEHLHRRVIIYSPA
Sbjct: 1   MANPLLHRYNFDRSRLSAFVHCTRLLSSDSLVEVKPGEIGIASGIPEEHLHRRVIIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120
           RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK
Sbjct: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120

Query: 121 HGWQYEVKKRQTPLLKPKSYADNFKWKGPPRAEEN 156
           HGWQYEVKKRQTPLLKPKSYADNFKWKGPPRAEEN
Sbjct: 121 HGWQYEVKKRQTPLLKPKSYADNFKWKGPPRAEEN 155

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BLAST of CsaV3_2G026040 vs. NCBI nr
Match: KAA0060960.1 (NADH dehydrogenase (ubiquinone) iron-sulfur protein 4 [Cucumis melo var. makuwa])

HSP 1 Score: 310.5 bits (794), Expect = 8.5e-81
Identity = 145/155 (93.55%), Postives = 152/155 (98.06%), Query Frame = 0


Query: 1   MANPLLHRYNFDRSRLSAFVHCTRLLSSDSLVEVKPGEIGIASGIPEEHLHRRVIIYSPA 60
           MAN LL RYNFDRS+LSAFVHCTRLLSSDSLVE KPGEIG+ASGIPEEHL+RRVIIYSPA
Sbjct: 1   MANSLLRRYNFDRSKLSAFVHCTRLLSSDSLVEFKPGEIGLASGIPEEHLNRRVIIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120
           RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVG+A+L+FDSAEAAMRFAEK
Sbjct: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGEASLTFDSAEAAMRFAEK 120

Query: 121 HGWQYEVKKRQTPLLKPKSYADNFKWKGPPRAEEN 156
           HGWQYEVKKRQTPLLKPKSYADNFKWKGPP+AEEN
Sbjct: 121 HGWQYEVKKRQTPLLKPKSYADNFKWKGPPKAEEN 155

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BLAST of CsaV3_2G026040 vs. NCBI nr
Match: XP_038884729.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 309.7 bits (792), Expect = 1.4e-80
Identity = 145/155 (93.55%), Postives = 150/155 (96.77%), Query Frame = 0


Query: 1   MANPLLHRYNFDRSRLSAFVHCTRLLSSDSLVEVKPGEIGIASGIPEEHLHRRVIIYSPA 60
           MAN LL RYNFDRS+LSAFVHCTRLLSSDSLVE KPGEIG+ SGIPEEH+ RRVIIYSPA
Sbjct: 1   MANSLLGRYNFDRSKLSAFVHCTRLLSSDSLVEFKPGEIGMVSGIPEEHIRRRVIIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120
           RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK
Sbjct: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120

Query: 121 HGWQYEVKKRQTPLLKPKSYADNFKWKGPPRAEEN 156
           HGWQYEVKKRQTP+LKPKSYADNFKWKGPP+AEEN
Sbjct: 121 HGWQYEVKKRQTPILKPKSYADNFKWKGPPKAEEN 155

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BLAST of CsaV3_2G026040 vs. NCBI nr
Match: XP_008444538.1 (PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucumis melo])

HSP 1 Score: 309.3 bits (791), Expect = 1.9e-80
Identity = 143/155 (92.26%), Postives = 152/155 (98.06%), Query Frame = 0


Query: 1   MANPLLHRYNFDRSRLSAFVHCTRLLSSDSLVEVKPGEIGIASGIPEEHLHRRVIIYSPA 60
           MAN LL RYNFDRS+LSAFVHCTRLLSSDSLVE KPGE+G+ASGIPEEHL+RRVIIYSPA
Sbjct: 1   MANSLLRRYNFDRSKLSAFVHCTRLLSSDSLVEFKPGEVGLASGIPEEHLNRRVIIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120
           RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVG+A+L+FDSAEAAMRFAEK
Sbjct: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGEASLTFDSAEAAMRFAEK 120

Query: 121 HGWQYEVKKRQTPLLKPKSYADNFKWKGPPRAEEN 156
           HGWQYEVKKRQTP+LKPKSYADNFKWKGPP+AEEN
Sbjct: 121 HGWQYEVKKRQTPILKPKSYADNFKWKGPPKAEEN 155

[Close]

BLAST of CsaV3_2G026040 vs. NCBI nr
Match: XP_022131424.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Momordica charantia])

HSP 1 Score: 281.6 bits (719), Expect = 4.2e-72
Identity = 134/154 (87.01%), Postives = 138/154 (89.61%), Query Frame = 0


Query: 1   MANPLLHRYNFDRSRLSAFVHCTRLLSSDSLVEVKPGEIGIASGIPEEHLHRRVIIYSPA 60
           MA+ LL  YN  RS  SAFVH  RLLSSDSLVE KP EIGI SGIPE HL RR+IIYSPA
Sbjct: 1   MASSLLRSYNLARSDRSAFVHWRRLLSSDSLVEFKPAEIGIVSGIPENHLRRRIIIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120
           RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAM FAEK
Sbjct: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMAFAEK 120

Query: 121 HGWQYEVKKRQTPLLKPKSYADNFKWKGPPRAEE 155
           HGWQYEVKKRQTP+LKPKSYADNFKWKGPP+ EE
Sbjct: 121 HGWQYEVKKRQTPILKPKSYADNFKWKGPPKTEE 154

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BLAST of CsaV3_2G026040 vs. ExPASy Swiss-Prot
Match: Q9FJW4 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=FRO1 PE=1 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 4.6e-53
Identity = 99/132 (75.00%), Postives = 112/132 (84.85%), Query Frame = 0


Query: 24  RLLSSDSLVE--VKPGEIGIASGIPEEHLHRRVIIYSPARTATQQGSGKVGKWKINFLST 83
           R  ++D++VE   K GEIG  SGIPEEHL R+VIIYSPARTATQ GSGK+GKWKINF+ST
Sbjct: 22  RPFATDAVVESDYKRGEIGKVSGIPEEHLSRKVIIYSPARTATQSGSGKLGKWKINFVST 81

Query: 84  HKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEKHGWQYEVKKRQTPLLKPKSYA 143
            KWENPLMGWTSTGDPYANVGD+AL+FDS EAA  FAE+HGW Y+VKK  TPLLK KSY+
Sbjct: 82  LKWENPLMGWTSTGDPYANVGDSALAFDSEEAAKSFAERHGWDYKVKKPNTPLLKVKSYS 141

Query: 144 DNFKWKGPPRAE 154
           DNFKWKG P+ E
Sbjct: 142 DNFKWKGNPQPE 153

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BLAST of CsaV3_2G026040 vs. ExPASy Swiss-Prot
Match: Q5XIF3 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs4 PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.4e-25
Identity = 57/125 (45.60%), Postives = 78/125 (62.40%), Query Frame = 0


Query: 23  TRLLSSDSLVEVKPGEIGIASGIPEEHLH-RRVIIYSPARTATQQGSGKVGKWKINFLST 82
           T+L++ D  ++V P      +G+PEEH+  R+V I+ PAR   Q G     KWK+ F + 
Sbjct: 50  TQLITVDEKLDVTP-----LTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFDTR 109

Query: 83  HKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEKHGWQYEVKKRQTPLLKPKSYA 142
            +WENPLMGW ST DP +N+    L+F + E A+ FAEKHGW Y+V+ R+ P  K KSY 
Sbjct: 110 ERWENPLMGWASTADPLSNM---VLTFSAKEDAVAFAEKHGWSYDVEGRKVPKPKSKSYG 166

Query: 143 DNFKW 147
            NF W
Sbjct: 170 ANFSW 166

[Close]

BLAST of CsaV3_2G026040 vs. ExPASy Swiss-Prot
Match: Q0MQH0 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Gorilla gorilla gorilla OX=9595 GN=NDUFS4 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 7.6e-24
Identity = 51/110 (46.36%), Postives = 71/110 (64.55%), Query Frame = 0


Query: 38  EIGIASGIPEEHLH-RRVIIYSPARTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGD 97
           +I   +G+PEEH+  R+V I+ PAR   Q G     KWK+ F +  +WENPLMGW ST D
Sbjct: 60  DITTLTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWASTAD 119

Query: 98  PYANVGDAALSFDSAEAAMRFAEKHGWQYEVKKRQTPLLKPKSYADNFKW 147
           P +N+    L+F + E A+ FAEK+GW Y++++R+ P  K KSY  NF W
Sbjct: 120 PLSNM---VLTFSTKEDAVSFAEKNGWSYDIEERKVPKPKSKSYGANFSW 166

[Close]

BLAST of CsaV3_2G026040 vs. ExPASy Swiss-Prot
Match: O43181 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Homo sapiens OX=9606 GN=NDUFS4 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 7.6e-24
Identity = 51/110 (46.36%), Postives = 71/110 (64.55%), Query Frame = 0


Query: 38  EIGIASGIPEEHLH-RRVIIYSPARTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGD 97
           +I   +G+PEEH+  R+V I+ PAR   Q G     KWK+ F +  +WENPLMGW ST D
Sbjct: 60  DITTLTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWASTAD 119

Query: 98  PYANVGDAALSFDSAEAAMRFAEKHGWQYEVKKRQTPLLKPKSYADNFKW 147
           P +N+    L+F + E A+ FAEK+GW Y++++R+ P  K KSY  NF W
Sbjct: 120 PLSNM---VLTFSTKEDAVSFAEKNGWSYDIEERKVPKPKSKSYGANFSW 166

[Close]

BLAST of CsaV3_2G026040 vs. ExPASy Swiss-Prot
Match: P0CB95 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Pongo abelii OX=9601 GN=NDUFS4 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 9.9e-24
Identity = 52/110 (47.27%), Postives = 71/110 (64.55%), Query Frame = 0


Query: 38  EIGIASGIPEEHLH-RRVIIYSPARTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGD 97
           +I   +G+PEEH+  R+V I+ PAR   Q G     KWK+ F +  +WENPLMGW ST D
Sbjct: 60  DITTLTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWASTAD 119

Query: 98  PYANVGDAALSFDSAEAAMRFAEKHGWQYEVKKRQTPLLKPKSYADNFKW 147
           P +N+    L+F + E A+ FAEK+GW Y+V++R+ P  K KSY  NF W
Sbjct: 120 PLSNM---VLTFRTKEDAVSFAEKNGWSYDVEERKVPKPKSKSYGANFSW 166

[Close]

BLAST of CsaV3_2G026040 vs. ExPASy TrEMBL
Match: A0A0A0LKZ2 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucumis sativus OX=3659 GN=Csa_2G354640 PE=3 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 1.9e-86
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MANPLLHRYNFDRSRLSAFVHCTRLLSSDSLVEVKPGEIGIASGIPEEHLHRRVIIYSPA 60
           MANPLLHRYNFDRSRLSAFVHCTRLLSSDSLVEVKPGEIGIASGIPEEHLHRRVIIYSPA
Sbjct: 1   MANPLLHRYNFDRSRLSAFVHCTRLLSSDSLVEVKPGEIGIASGIPEEHLHRRVIIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120
           RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK
Sbjct: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120

Query: 121 HGWQYEVKKRQTPLLKPKSYADNFKWKGPPRAEEN 156
           HGWQYEVKKRQTPLLKPKSYADNFKWKGPPRAEEN
Sbjct: 121 HGWQYEVKKRQTPLLKPKSYADNFKWKGPPRAEEN 155

[Close]

BLAST of CsaV3_2G026040 vs. ExPASy TrEMBL
Match: A0A5A7V0V4 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00940 PE=3 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 4.1e-81
Identity = 145/155 (93.55%), Postives = 152/155 (98.06%), Query Frame = 0


Query: 1   MANPLLHRYNFDRSRLSAFVHCTRLLSSDSLVEVKPGEIGIASGIPEEHLHRRVIIYSPA 60
           MAN LL RYNFDRS+LSAFVHCTRLLSSDSLVE KPGEIG+ASGIPEEHL+RRVIIYSPA
Sbjct: 1   MANSLLRRYNFDRSKLSAFVHCTRLLSSDSLVEFKPGEIGLASGIPEEHLNRRVIIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120
           RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVG+A+L+FDSAEAAMRFAEK
Sbjct: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGEASLTFDSAEAAMRFAEK 120

Query: 121 HGWQYEVKKRQTPLLKPKSYADNFKWKGPPRAEEN 156
           HGWQYEVKKRQTPLLKPKSYADNFKWKGPP+AEEN
Sbjct: 121 HGWQYEVKKRQTPLLKPKSYADNFKWKGPPKAEEN 155

[Close]

BLAST of CsaV3_2G026040 vs. ExPASy TrEMBL
Match: A0A1S3BAL3 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103487828 PE=3 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 9.1e-81
Identity = 143/155 (92.26%), Postives = 152/155 (98.06%), Query Frame = 0


Query: 1   MANPLLHRYNFDRSRLSAFVHCTRLLSSDSLVEVKPGEIGIASGIPEEHLHRRVIIYSPA 60
           MAN LL RYNFDRS+LSAFVHCTRLLSSDSLVE KPGE+G+ASGIPEEHL+RRVIIYSPA
Sbjct: 1   MANSLLRRYNFDRSKLSAFVHCTRLLSSDSLVEFKPGEVGLASGIPEEHLNRRVIIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120
           RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVG+A+L+FDSAEAAMRFAEK
Sbjct: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGEASLTFDSAEAAMRFAEK 120

Query: 121 HGWQYEVKKRQTPLLKPKSYADNFKWKGPPRAEEN 156
           HGWQYEVKKRQTP+LKPKSYADNFKWKGPP+AEEN
Sbjct: 121 HGWQYEVKKRQTPILKPKSYADNFKWKGPPKAEEN 155

[Close]

BLAST of CsaV3_2G026040 vs. ExPASy TrEMBL
Match: A0A6J1BQ75 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111004639 PE=3 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 2.0e-72
Identity = 134/154 (87.01%), Postives = 138/154 (89.61%), Query Frame = 0


Query: 1   MANPLLHRYNFDRSRLSAFVHCTRLLSSDSLVEVKPGEIGIASGIPEEHLHRRVIIYSPA 60
           MA+ LL  YN  RS  SAFVH  RLLSSDSLVE KP EIGI SGIPE HL RR+IIYSPA
Sbjct: 1   MASSLLRSYNLARSDRSAFVHWRRLLSSDSLVEFKPAEIGIVSGIPENHLRRRIIIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120
           RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAM FAEK
Sbjct: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMAFAEK 120

Query: 121 HGWQYEVKKRQTPLLKPKSYADNFKWKGPPRAEE 155
           HGWQYEVKKRQTP+LKPKSYADNFKWKGPP+ EE
Sbjct: 121 HGWQYEVKKRQTPILKPKSYADNFKWKGPPKTEE 154

[Close]

BLAST of CsaV3_2G026040 vs. ExPASy TrEMBL
Match: A0A1U8AXT1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Nelumbo nucifera OX=4432 GN=LOC104608567 PE=3 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.9e-62
Identity = 114/153 (74.51%), Postives = 129/153 (84.31%), Query Frame = 0


Query: 1   MANPLLHRYNFDRSRLSAFVHCTRLLSSDSLVEVKPGEIGIASGIPEEHLHRRVIIYSPA 60
           MAN L   ++  R    AF+   R  S+D+LVEVKPGE+G+ SGIPEEHL RRV+IYSPA
Sbjct: 1   MANTLQRGFSSARVLRPAFISAPRSFSADALVEVKPGEVGVVSGIPEEHLRRRVVIYSPA 60

Query: 61  RTATQQGSGKVGKWKINFLSTHKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEK 120
           RTA+QQGSGKVG+WKINFLST KWENPLMGWTSTGDPYANVGDA LSFDS EAA  FAE+
Sbjct: 61  RTASQQGSGKVGRWKINFLSTQKWENPLMGWTSTGDPYANVGDAGLSFDSEEAARAFAER 120

Query: 121 HGWQYEVKKRQTPLLKPKSYADNFKWKGPPRAE 154
           HGW+Y VKKR TPLLKPK+YADNFKWKGPP++E
Sbjct: 121 HGWEYAVKKRHTPLLKPKAYADNFKWKGPPKSE 153

[Close]

BLAST of CsaV3_2G026040 vs. TAIR 10
Match: AT5G67590.1 (NADH-ubiquinone oxidoreductase-related )

HSP 1 Score: 208.8 bits (530), Expect = 3.2e-54
Identity = 99/132 (75.00%), Postives = 112/132 (84.85%), Query Frame = 0


Query: 24  RLLSSDSLVE--VKPGEIGIASGIPEEHLHRRVIIYSPARTATQQGSGKVGKWKINFLST 83
           R  ++D++VE   K GEIG  SGIPEEHL R+VIIYSPARTATQ GSGK+GKWKINF+ST
Sbjct: 22  RPFATDAVVESDYKRGEIGKVSGIPEEHLSRKVIIYSPARTATQSGSGKLGKWKINFVST 81

Query: 84  HKWENPLMGWTSTGDPYANVGDAALSFDSAEAAMRFAEKHGWQYEVKKRQTPLLKPKSYA 143
            KWENPLMGWTSTGDPYANVGD+AL+FDS EAA  FAE+HGW Y+VKK  TPLLK KSY+
Sbjct: 82  LKWENPLMGWTSTGDPYANVGDSALAFDSEEAAKSFAERHGWDYKVKKPNTPLLKVKSYS 141

Query: 144 DNFKWKGPPRAE 154
           DNFKWKG P+ E
Sbjct: 142 DNFKWKGNPQPE 153

The following BLAST results are available for this feature:

BLAST of CsaV3_2G026040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142898.1	3.9e-86	100.00	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Cucumis sa...	[more]
KAA0060960.1	8.5e-81	93.55	NADH dehydrogenase (ubiquinone) iron-sulfur protein 4 [Cucumis melo var. makuwa]	[more]
XP_038884729.1	1.4e-80	93.55	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Benin...	[more]
XP_008444538.1	1.9e-80	92.26	PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-...	[more]
XP_022131424.1	4.2e-72	87.01	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Momor...	[more]

BLAST of CsaV3_2G026040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJW4	4.6e-53	75.00	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Arabidop...	[more]
Q5XIF3	1.4e-25	45.60	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Rattus n...	[more]
Q0MQH0	7.6e-24	46.36	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Gorilla ...	[more]
O43181	7.6e-24	46.36	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Homo sap...	[more]
P0CB95	9.9e-24	47.27	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Pongo ab...	[more]

BLAST of CsaV3_2G026040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKZ2	1.9e-86	100.00	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucumis ...	[more]
A0A5A7V0V4	4.1e-81	93.55	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucumis ...	[more]
A0A1S3BAL3	9.1e-81	92.26	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Cucumis ...	[more]
A0A6J1BQ75	2.0e-72	87.01	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Momordic...	[more]
A0A1U8AXT1	1.9e-62	74.51	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Nelumbo ...	[more]

BLAST of CsaV3_2G026040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67590.1	3.2e-54	75.00	NADH-ubiquinone oxidoreductase-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038532	NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamily	GENE3D	3.30.160.190	atu1810 like domain	coord: 52..127 e-value: 5.0E-35 score: 121.3
IPR006885	NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial	PFAM	PF04800	ETC_C1_NDUFA4	coord: 53..147 e-value: 2.9E-34 score: 117.2
IPR006885	NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial	PANTHER	PTHR12219	NADH-UBIQUINONE OXIDOREDUCTASE	coord: 13..154
None	No IPR available	PANTHER	PTHR12219:SF23	NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 4, MITOCHONDRIAL-LIKE	coord: 13..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G026040.1	CsaV3_2G026040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
molecular_function	GO:0016651	oxidoreductase activity, acting on NAD(P)H