CsaV3_2G026020 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_2G026020
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	protein SOB FIVE-LIKE 6-like
Location	chr2: 17892143 .. 17894451 (-)
RNA-Seq Expression	CsaV3_2G026020
Synteny	CsaV3_2G026020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAATAAATAAAAAAAGGGAGGAATTTGACAAGACAAAACAGAGGACGAGTATTCACCGAAATAATTTTAGGAATGGACAATTTTTATTAATACTTTGGGGCCGCCTTCCATTTAACAATCCAGGTGGCTTGCATCTCCCAAATCCCAATCATTGATCCCTAAATACCACACTCTATAAAACTAACCAATACCCACTCTCTTATTTTCATTTAACAAACAAACAAACAATCCTCCAACCAACCCACTTTCAGCCACTCCACTCTCCAATTCTCTTCCTCCTCTGTTTTTTTGGGGTTTTTTTTCTCTCTTTTTCTTCTTAAGGATGAGTAATTTTACAGGTTCGCATTGTGATAATAGTGGGTGTGAATCGGGGTGGACAATGTATTTCGAGGAGTCGATTGAGACGGAGGAAAGGTTTAGGGGGAGTCCGGTGGATTATGGCGGCGGAGAGAAGGAGGAGGAGGAAGAAAGGGATTTGTCGATGATTTCGGATGCATCGTCGGGACCGAGGAACGGGTATTATGAGGAGAAGAATTGTCAGTCAGTGTCGCGGAGTGGAGGGAAATTGGTGGCCGGGAAAAGTAAGAGGCAAGAGGAAATGGGGTGGCGGAACCAACATTCTTGCCTTGATGATACTGCAAGCTCCCCTGTTTTTGGGCTTTCTAAGGTTAGTTTGCTTCTTGTTGATCTCTAGAATCATAGACTTTTGGCAATGGCTATGGCTGTGGCTATGGCTGTGGGTTTGGTAATTAGTTGAAAATGTTGTTAATTCTTTTATACTTCATTGCCAATCTTCTTGAGGAATGAGGTTTGTGGGTTTTCTTGCTTTTTTTCTTTTTCAATTCTCTAATTTCAATTACTTTTTTTTTCGTTTTTCTTTTTTCTTTTTTCCCCCTTAGATAAAAATATTTACTTTACTATACCTCATATGTCTCGTTTTCTTGGTTGAAATACACACACATGTAACAAATGTCACCCAAGGAATAAAGTTCTAAAGTTTATTTCCATTTCTTTAATGTAAAAGTTTGGTTCCACTGTCCTTCTGGGGAAAAATATATACCCTTAAATATTGCATTGTATCACTTAGTTCTAAAGTTTTTTTTTTTGACAGATTAAATCAATGTAGATACCTTTTCTTTCAAACTGTTAATACATATTTTATATCAAACTAACATAATATTAGCATTTTATTTATTGATTTATTTTTTGGGAAAAAAAAGTTAGCTCTTTCTTTTTTTTAAAAAAGCTAAAATCTTATAGAACGTGGTATTAGTAACTTTCCGTTGATATGAATTATTATCCATCCTCTTGTCTTCTATTCCATGATGGTTTTACTTTGATCTTATTTTAAATATTTTAAATGAAATAATAATAAATTTATAATATTACGATTGAATGAGAGTCAAAAGAATTTAAATGACTTGACTAGTTTTGGTATAGACTATGACTTTTGACTTCAAATATATACACATTAAATTGAGTTTATAGTTTAATTCATTGCATTTAGGCCCAAACTAAAGAAATGTCATATCAGAATTTCCCAATCAGATATATATATATATATCTAAGAAGTTAGTTGTCGTTGTCAATAATTTCTTGTCAGTCACCTTTTTCTCCTGTGTTATTTACAGATCAGAGAGACGAATCCATACAGAAATGAAGGTTTGGCGGATAATGTAAAAGAATTCTCCCAAACCCATTCTCGAAAACATGGCAAGGTAAAAACCACAAAAAACAAACCATCCTGTTTTTCAAAATCTTGGAAACAACCGTACGACTAACATGTAAAAAAAAAAAAAACTTTGTACTTCGCAGAAACAAACAAGCTTTTTTCAGTCTTCCTCAGTAAAAAAATTGGCCAAAAATGTCTCAGGTAAAAAACTCTCTCAACCCGCACCAACAACGGTAAAAGGCTAAGCTTTGTGTATGTGTGTAGGGTTAAAAGTTTGGAGTGATTTGTGTGTGTGCAGGCGATTATCAAGAACAGTAGAAGTGGAACGCCGAGAATAATTAAATGAAATGATAGAGACACGAGGAGGATCGTGTGGATTATTATTATTTTGTTGGTTCTCTTTTTATCATATTTTTTTTCTTTCTTCTTTTTACTCAATTTTCTCTGGCTTTATTGTTAATGCAGCCAATTGATTGAAAATATTTGAATTATTGTTTGGAAAGTTATTGTATTGTTATTATTGTTCTTTTTCAAGAAGTGTATATTGCAAAAAAATAATAATAATATATCACCCATAGTTTGTCCCTTGTAGCTCTATATATATTACCCATGAAGGAAAATATACATATTTACAG

mRNA sequence

ATGAGTAATTTTACAGGTTCGCATTGTGATAATAGTGGGTGTGAATCGGGGTGGACAATGTATTTCGAGGAGTCGATTGAGACGGAGGAAAGGTTTAGGGGGAGTCCGGTGGATTATGGCGGCGGAGAGAAGGAGGAGGAGGAAGAAAGGGATTTGTCGATGATTTCGGATGCATCGTCGGGACCGAGGAACGGGTATTATGAGGAGAAGAATTGTCAGTCAGTGTCGCGGAGTGGAGGGAAATTGGTGGCCGGGAAAAGTAAGAGGCAAGAGGAAATGGGGTGGCGGAACCAACATTCTTGCCTTGATGATACTGCAAGCTCCCCTGTTTTTGGGCTTTCTAAGATCAGAGAGACGAATCCATACAGAAATGAAGGTTTGGCGGATAATGTAAAAGAATTCTCCCAAACCCATTCTCGAAAACATGGCAAGAAACAAACAAGCTTTTTTCAGTCTTCCTCAGTAAAAAAATTGGCCAAAAATGTCTCAGGCGATTATCAAGAACAGTAG

Coding sequence (CDS)

ATGAGTAATTTTACAGGTTCGCATTGTGATAATAGTGGGTGTGAATCGGGGTGGACAATGTATTTCGAGGAGTCGATTGAGACGGAGGAAAGGTTTAGGGGGAGTCCGGTGGATTATGGCGGCGGAGAGAAGGAGGAGGAGGAAGAAAGGGATTTGTCGATGATTTCGGATGCATCGTCGGGACCGAGGAACGGGTATTATGAGGAGAAGAATTGTCAGTCAGTGTCGCGGAGTGGAGGGAAATTGGTGGCCGGGAAAAGTAAGAGGCAAGAGGAAATGGGGTGGCGGAACCAACATTCTTGCCTTGATGATACTGCAAGCTCCCCTGTTTTTGGGCTTTCTAAGATCAGAGAGACGAATCCATACAGAAATGAAGGTTTGGCGGATAATGTAAAAGAATTCTCCCAAACCCATTCTCGAAAACATGGCAAGAAACAAACAAGCTTTTTTCAGTCTTCCTCAGTAAAAAAATTGGCCAAAAATGTCTCAGGCGATTATCAAGAACAGTAG

Protein sequence

MSNFTGSHCDNSGCESGWTMYFEESIETEERFRGSPVDYGGGEKEEEEERDLSMISDASSGPRNGYYEEKNCQSVSRSGGKLVAGKSKRQEEMGWRNQHSCLDDTASSPVFGLSKIRETNPYRNEGLADNVKEFSQTHSRKHGKKQTSFFQSSSVKKLAKNVSGDYQEQ*

Homology

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BLAST of CsaV3_2G026020 vs. NCBI nr
Match: XP_004142900.1 (uncharacterized protein LOC101210927 [Cucumis sativus] >KGN62436.1 hypothetical protein Csa_018587 [Cucumis sativus])

HSP 1 Score: 341.7 bits (875), Expect = 3.7e-90
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MSNFTGSHCDNSGCESGWTMYFEESIETEERFRGSPVDYGGGEKEEEEERDLSMISDASS 60
           MSNFTGSHCDNSGCESGWTMYFEESIETEERFRGSPVDYGGGEKEEEEERDLSMISDASS
Sbjct: 1   MSNFTGSHCDNSGCESGWTMYFEESIETEERFRGSPVDYGGGEKEEEEERDLSMISDASS 60

Query: 61  GPRNGYYEEKNCQSVSRSGGKLVAGKSKRQEEMGWRNQHSCLDDTASSPVFGLSKIRETN 120
           GPRNGYYEEKNCQSVSRSGGKLVAGKSKRQEEMGWRNQHSCLDDTASSPVFGLSKIRETN
Sbjct: 61  GPRNGYYEEKNCQSVSRSGGKLVAGKSKRQEEMGWRNQHSCLDDTASSPVFGLSKIRETN 120

Query: 121 PYRNEGLADNVKEFSQTHSRKHGKKQTSFFQSSSVKKLAKNVSGDYQEQ 170
           PYRNEGLADNVKEFSQTHSRKHGKKQTSFFQSSSVKKLAKNVSGDYQEQ
Sbjct: 121 PYRNEGLADNVKEFSQTHSRKHGKKQTSFFQSSSVKKLAKNVSGDYQEQ 169

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BLAST of CsaV3_2G026020 vs. NCBI nr
Match: XP_008444534.1 (PREDICTED: uncharacterized protein LOC103487825 [Cucumis melo])

HSP 1 Score: 308.9 bits (790), Expect = 2.7e-80
Identity = 159/170 (93.53%), Postives = 160/170 (94.12%), Query Frame = 0


Query: 1   MSNFTGSHCDNSGCESGWTMYFEESIETEERFRGSPVDYGGGEKEEEEERDLSMISDASS 60
           MSNFTGSH DNSGCESGWTMYFEESIE EERFRGSPVDYGGGEK EEEE DLSMISDASS
Sbjct: 1   MSNFTGSHYDNSGCESGWTMYFEESIEKEERFRGSPVDYGGGEK-EEEEGDLSMISDASS 60

Query: 61  GPRNGYYEEKNCQSVSRSGGKLVAGKSKRQEEMGWRNQHSCLDDTASSPVFGLSKIRET- 120
           GPRNGYYEEK+C SV RSGGKLVAGKSKRQEEMGWRNQHSCLDDTASSPV GLSKIRET 
Sbjct: 61  GPRNGYYEEKDCPSVLRSGGKLVAGKSKRQEEMGWRNQHSCLDDTASSPVLGLSKIRETN 120

Query: 121 NPYRNEGLADNVKEFSQTHSRKHGKKQTSFFQSSSVKKLAKNVSGDYQEQ 170
           NPYRNEGLADN KEFSQTHSRKHGKKQTSFFQSSSVKKLAKNVSGDY EQ
Sbjct: 121 NPYRNEGLADNAKEFSQTHSRKHGKKQTSFFQSSSVKKLAKNVSGDYPEQ 169

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BLAST of CsaV3_2G026020 vs. NCBI nr
Match: XP_038886134.1 (uncharacterized protein LOC120076391 isoform X2 [Benincasa hispida])

HSP 1 Score: 270.4 bits (690), Expect = 1.1e-68
Identity = 143/171 (83.63%), Postives = 150/171 (87.72%), Query Frame = 0


Query: 1   MSNFTGSHCDNSGCESGWTMYFEESIETEERFRGSPVDYGGGEKEEEEERDLSMISDASS 60
           MSNF+GSHC+NSGCESGWTMYFEESIETE  FR S VDYGGG K EEEE DLSMISDASS
Sbjct: 1   MSNFSGSHCNNSGCESGWTMYFEESIETEGGFRRSEVDYGGGGK-EEEEGDLSMISDASS 60

Query: 61  GPRNGYYEEKNCQSVSRSGGKLVAGKSKRQEEMGWRNQHSCLDDTASSPVFGLSKIRETN 120
           GP NGYYEE N Q V R+GGK  AGKSKR+EEMG RNQHSCLDDTASSPVFGLS +RE +
Sbjct: 61  GPMNGYYEENNYQPVRRNGGKSAAGKSKRKEEMGRRNQHSCLDDTASSPVFGLSNVREMS 120

Query: 121 PYRNEGLADNVKEFS-QTHSRK-HGKKQTSFFQSSSVKKLAKNVSGDYQEQ 170
           PYRNEGL +NVKEFS QTHSRK HGKKQTSFFQSSSVKKL KNVSGDYQEQ
Sbjct: 121 PYRNEGLVENVKEFSQQTHSRKQHGKKQTSFFQSSSVKKLGKNVSGDYQEQ 170

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BLAST of CsaV3_2G026020 vs. NCBI nr
Match: XP_038886133.1 (uncharacterized protein LOC120076391 isoform X1 [Benincasa hispida])

HSP 1 Score: 260.0 bits (663), Expect = 1.4e-65
Identity = 138/166 (83.13%), Postives = 145/166 (87.35%), Query Frame = 0


Query: 1   MSNFTGSHCDNSGCESGWTMYFEESIETEERFRGSPVDYGGGEKEEEEERDLSMISDASS 60
           MSNF+GSHC+NSGCESGWTMYFEESIETE  FR S VDYGGG K EEEE DLSMISDASS
Sbjct: 1   MSNFSGSHCNNSGCESGWTMYFEESIETEGGFRRSEVDYGGGGK-EEEEGDLSMISDASS 60

Query: 61  GPRNGYYEEKNCQSVSRSGGKLVAGKSKRQEEMGWRNQHSCLDDTASSPVFGLSKIRETN 120
           GP NGYYEE N Q V R+GGK  AGKSKR+EEMG RNQHSCLDDTASSPVFGLS +RE +
Sbjct: 61  GPMNGYYEENNYQPVRRNGGKSAAGKSKRKEEMGRRNQHSCLDDTASSPVFGLSNVREMS 120

Query: 121 PYRNEGLADNVKEFS-QTHSRK-HGKKQTSFFQSSSVKKLAKNVSG 165
           PYRNEGL +NVKEFS QTHSRK HGKKQTSFFQSSSVKKL KNVSG
Sbjct: 121 PYRNEGLVENVKEFSQQTHSRKQHGKKQTSFFQSSSVKKLGKNVSG 165

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BLAST of CsaV3_2G026020 vs. NCBI nr
Match: XP_022997597.1 (uncharacterized protein LOC111492483 [Cucurbita maxima])

HSP 1 Score: 257.3 bits (656), Expect = 9.3e-65
Identity = 134/173 (77.46%), Postives = 148/173 (85.55%), Query Frame = 0


Query: 1   MSNFTGSHCDNSGCESGWTMYFEESIETEERFRGSPVDYGG---GEKEEEEERDLSMISD 60
           MS+F+GSHC+N+ CESGWTMY EES ETE RFR S VDYGG    E+EEEEE DLSMISD
Sbjct: 1   MSHFSGSHCNNTACESGWTMYLEESFETEGRFRPSAVDYGGRGKEEEEEEEEGDLSMISD 60

Query: 61  ASSGPRNGYYEEKNCQSVSRSGGKLVAGKSKRQEEMGWRNQHSCLDDTASSPVFGLSKIR 120
           ASSGPR+GY EE NCQSV R+GGK  A KSKR+E+MG RN+HSCLDDTASSPVFGLSK R
Sbjct: 61  ASSGPRDGYSEE-NCQSVRRNGGKAAAAKSKRKEDMGRRNKHSCLDDTASSPVFGLSKTR 120

Query: 121 ETNPYRNEGLADNVKEFSQTHSRK-HGKKQTSFFQSSSVKKLAKNVSGDYQEQ 170
           ETNPYRNEGL +NVKEFSQTHSRK HGKK T FFQSSS KK+ KNVSGD++EQ
Sbjct: 121 ETNPYRNEGLVENVKEFSQTHSRKQHGKKPTGFFQSSSAKKMTKNVSGDFEEQ 172

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BLAST of CsaV3_2G026020 vs. ExPASy Swiss-Prot
Match: Q8L9K4 (Protein SOB FIVE-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=SOFL5 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.8e-11
Identity = 56/163 (34.36%), Postives = 86/163 (52.76%), Query Frame = 0


Query: 11  NSGCESGWTMYFEESI--------------ETEERFRGSPVDYGGGEKEEEEERDLSMIS 70
           +SGCESGWT+Y ++S+              ++  R + S       ++EEEEE DLSMIS
Sbjct: 5   SSGCESGWTLYLDQSVSSPSPSCFRDSNGFDSRRRSKDSWDQNYVHQEEEEEEDDLSMIS 64

Query: 71  DASSGPRNGYYEEKNCQSVSRSGGKLVAGKSKRQEEMGWRNQHSCLDDTASSPVF----- 130
           DASSGPRN   EE + + ++  G K    + K++ +  +   +S LDDTASSP+F     
Sbjct: 65  DASSGPRN-ISEEDSVKKINIVGLKKQCKREKKRRD--YEKMNSLLDDTASSPLFNFPHM 124

Query: 131 -----GLSKIRETNPYRNEGLADNVKEFSQTHSRKHGKKQTSF 150
                G +KI +T P       ++  ++SQ  S    + +T+F
Sbjct: 125 LQKSVGGNKIEQTFP-------ESTLDYSQGFSATQFQDKTAF 157

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BLAST of CsaV3_2G026020 vs. ExPASy Swiss-Prot
Match: B6IDH8 (Protein SOB FIVE-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=SOFL6 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.3e-05
Identity = 57/174 (32.76%), Postives = 81/174 (46.55%), Query Frame = 0


Query: 15  ESGWTMYFEESIETEERFRGSPVDYGGGEKEEEEERDLSMISDASSGPRNGYYEEKN--- 74
           +SGWTMY   S            DY  GE ++E + D SM+SDASSGP   YY E+    
Sbjct: 13  DSGWTMYLGHSSSVSLHH----FDYHNGETKQEHDEDSSMVSDASSGP--PYYCEETVHE 72

Query: 75  ----------CQSVSRSGGKLVAGKSKRQEEMGWRNQ-HSCLDDTASSPVFGLSKIRETN 134
                     C+S S++  K    K K  EE G+  + +S  DDTASS   G  ++    
Sbjct: 73  DHLQQNTQYWCKSKSKNKNK---NKKKVHEEQGYSERFNSSFDDTASSLPVG-EEVSAHK 132

Query: 135 PYRNEGLADNVKEFSQTHSRKH---GKKQTSFFQSS-SVKKLA-KNVSGDYQEQ 170
            ++N+       +F Q++S +     K  + F Q +  V KLA  N  GD Q +
Sbjct: 133 QHQNQ--YQRFHDFCQSYSTRRICKEKVNSGFLQQAFPVDKLALDNQGGDNQRK 174

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BLAST of CsaV3_2G026020 vs. ExPASy TrEMBL
Match: A0A0A0LR31 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354620 PE=3 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 1.8e-90
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MSNFTGSHCDNSGCESGWTMYFEESIETEERFRGSPVDYGGGEKEEEEERDLSMISDASS 60
           MSNFTGSHCDNSGCESGWTMYFEESIETEERFRGSPVDYGGGEKEEEEERDLSMISDASS
Sbjct: 1   MSNFTGSHCDNSGCESGWTMYFEESIETEERFRGSPVDYGGGEKEEEEERDLSMISDASS 60

Query: 61  GPRNGYYEEKNCQSVSRSGGKLVAGKSKRQEEMGWRNQHSCLDDTASSPVFGLSKIRETN 120
           GPRNGYYEEKNCQSVSRSGGKLVAGKSKRQEEMGWRNQHSCLDDTASSPVFGLSKIRETN
Sbjct: 61  GPRNGYYEEKNCQSVSRSGGKLVAGKSKRQEEMGWRNQHSCLDDTASSPVFGLSKIRETN 120

Query: 121 PYRNEGLADNVKEFSQTHSRKHGKKQTSFFQSSSVKKLAKNVSGDYQEQ 170
           PYRNEGLADNVKEFSQTHSRKHGKKQTSFFQSSSVKKLAKNVSGDYQEQ
Sbjct: 121 PYRNEGLADNVKEFSQTHSRKHGKKQTSFFQSSSVKKLAKNVSGDYQEQ 169

[Close]

BLAST of CsaV3_2G026020 vs. ExPASy TrEMBL
Match: A0A1S3BBA3 (uncharacterized protein LOC103487825 OS=Cucumis melo OX=3656 GN=LOC103487825 PE=3 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.3e-80
Identity = 159/170 (93.53%), Postives = 160/170 (94.12%), Query Frame = 0


Query: 1   MSNFTGSHCDNSGCESGWTMYFEESIETEERFRGSPVDYGGGEKEEEEERDLSMISDASS 60
           MSNFTGSH DNSGCESGWTMYFEESIE EERFRGSPVDYGGGEK EEEE DLSMISDASS
Sbjct: 1   MSNFTGSHYDNSGCESGWTMYFEESIEKEERFRGSPVDYGGGEK-EEEEGDLSMISDASS 60

Query: 61  GPRNGYYEEKNCQSVSRSGGKLVAGKSKRQEEMGWRNQHSCLDDTASSPVFGLSKIRET- 120
           GPRNGYYEEK+C SV RSGGKLVAGKSKRQEEMGWRNQHSCLDDTASSPV GLSKIRET 
Sbjct: 61  GPRNGYYEEKDCPSVLRSGGKLVAGKSKRQEEMGWRNQHSCLDDTASSPVLGLSKIRETN 120

Query: 121 NPYRNEGLADNVKEFSQTHSRKHGKKQTSFFQSSSVKKLAKNVSGDYQEQ 170
           NPYRNEGLADN KEFSQTHSRKHGKKQTSFFQSSSVKKLAKNVSGDY EQ
Sbjct: 121 NPYRNEGLADNAKEFSQTHSRKHGKKQTSFFQSSSVKKLAKNVSGDYPEQ 169

[Close]

BLAST of CsaV3_2G026020 vs. ExPASy TrEMBL
Match: A0A6J1K5J3 (uncharacterized protein LOC111492483 OS=Cucurbita maxima OX=3661 GN=LOC111492483 PE=3 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 4.5e-65
Identity = 134/173 (77.46%), Postives = 148/173 (85.55%), Query Frame = 0


Query: 1   MSNFTGSHCDNSGCESGWTMYFEESIETEERFRGSPVDYGG---GEKEEEEERDLSMISD 60
           MS+F+GSHC+N+ CESGWTMY EES ETE RFR S VDYGG    E+EEEEE DLSMISD
Sbjct: 1   MSHFSGSHCNNTACESGWTMYLEESFETEGRFRPSAVDYGGRGKEEEEEEEEGDLSMISD 60

Query: 61  ASSGPRNGYYEEKNCQSVSRSGGKLVAGKSKRQEEMGWRNQHSCLDDTASSPVFGLSKIR 120
           ASSGPR+GY EE NCQSV R+GGK  A KSKR+E+MG RN+HSCLDDTASSPVFGLSK R
Sbjct: 61  ASSGPRDGYSEE-NCQSVRRNGGKAAAAKSKRKEDMGRRNKHSCLDDTASSPVFGLSKTR 120

Query: 121 ETNPYRNEGLADNVKEFSQTHSRK-HGKKQTSFFQSSSVKKLAKNVSGDYQEQ 170
           ETNPYRNEGL +NVKEFSQTHSRK HGKK T FFQSSS KK+ KNVSGD++EQ
Sbjct: 121 ETNPYRNEGLVENVKEFSQTHSRKQHGKKPTGFFQSSSAKKMTKNVSGDFEEQ 172

[Close]

BLAST of CsaV3_2G026020 vs. ExPASy TrEMBL
Match: A0A6J1HFC4 (uncharacterized protein LOC111462920 OS=Cucurbita moschata OX=3662 GN=LOC111462920 PE=3 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 5.9e-65
Identity = 135/172 (78.49%), Postives = 146/172 (84.88%), Query Frame = 0


Query: 1   MSNFTGSHCDNSGCESGWTMYFEESIETEERFRGSPVDYG--GGEKEEEEERDLSMISDA 60
           MS+F+GSHC+N+ CESGWTMY EES ETE RFR   VDYG  G E+EEEEE DLSMISDA
Sbjct: 1   MSHFSGSHCNNTACESGWTMYLEESFETEGRFRPGAVDYGGRGKEEEEEEEGDLSMISDA 60

Query: 61  SSGPRNGYYEEKNCQSVSRSGGKLVAGKSKRQEEMGWRNQHSCLDDTASSPVFGLSKIRE 120
           SSGPR+GY EE NCQSV R+ GK  A KSKR+EEMG RN+HSCLDDTASSPVFGLSK RE
Sbjct: 61  SSGPRDGYSEE-NCQSVGRNAGKAAAAKSKRKEEMGRRNKHSCLDDTASSPVFGLSKTRE 120

Query: 121 TNPYRNEGLADNVKEFSQTHSRK-HGKKQTSFFQSSSVKKLAKNVSGDYQEQ 170
           TNPYRNEGL +NVKEFSQTHSRK HGKK TSFFQSSS KK  KNVSGD+QEQ
Sbjct: 121 TNPYRNEGLVENVKEFSQTHSRKQHGKKPTSFFQSSSAKKTTKNVSGDFQEQ 171

[Close]

BLAST of CsaV3_2G026020 vs. ExPASy TrEMBL
Match: A0A6J1BRF5 (uncharacterized protein LOC111005036 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005036 PE=3 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 1.0e-48
Identity = 114/175 (65.14%), Postives = 134/175 (76.57%), Query Frame = 0


Query: 1   MSNFTGSHCDNSGCESGWTMYFEESIETEERFRGSPVDYGGGEKEEEEERDLSMISDASS 60
           MSNF+G+HC NSGC+SGWT+YF++S   +ERFR S  DYGGG    EEE DLSM+SDASS
Sbjct: 1   MSNFSGTHC-NSGCDSGWTVYFQDS---DERFRPSVADYGGG----EEEGDLSMVSDASS 60

Query: 61  GPRNGY------YEEKNCQSVSRSGGKLVAGKSKRQEEMGWRNQHSCLDDTASSPVFGLS 120
           GPRNG+      +EE N Q V R  G   A K+KR++E+G RNQHS LDDTA+SPVF LS
Sbjct: 61  GPRNGFGDGPVGFEEXNFQPVPRRNGGKSAAKTKRRDEIGRRNQHSSLDDTATSPVFALS 120

Query: 121 KIRETNPYRNEGLADNVKEFSQTHSRK-HGKKQTSFFQSSSVKKLAKNVSGDYQE 169
           K RETNPY NE L +NVKEF+ +HSRK  GKKQTSFFQSSS KK  +NVSGD+QE
Sbjct: 121 K-RETNPYTNEDLVENVKEFAHSHSRKQQGKKQTSFFQSSSAKKSTRNVSGDFQE 166

[Close]

BLAST of CsaV3_2G026020 vs. TAIR 10
Match: AT4G33800.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 70.1 bits (170), Expect = 2.0e-12
Identity = 56/163 (34.36%), Postives = 86/163 (52.76%), Query Frame = 0


Query: 11  NSGCESGWTMYFEESI--------------ETEERFRGSPVDYGGGEKEEEEERDLSMIS 70
           +SGCESGWT+Y ++S+              ++  R + S       ++EEEEE DLSMIS
Sbjct: 5   SSGCESGWTLYLDQSVSSPSPSCFRDSNGFDSRRRSKDSWDQNYVHQEEEEEEDDLSMIS 64

Query: 71  DASSGPRNGYYEEKNCQSVSRSGGKLVAGKSKRQEEMGWRNQHSCLDDTASSPVF----- 130
           DASSGPRN   EE + + ++  G K    + K++ +  +   +S LDDTASSP+F     
Sbjct: 65  DASSGPRN-ISEEDSVKKINIVGLKKQCKREKKRRD--YEKMNSLLDDTASSPLFNFPHM 124

Query: 131 -----GLSKIRETNPYRNEGLADNVKEFSQTHSRKHGKKQTSF 150
                G +KI +T P       ++  ++SQ  S    + +T+F
Sbjct: 125 LQKSVGGNKIEQTFP-------ESTLDYSQGFSATQFQDKTAF 157

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BLAST of CsaV3_2G026020 vs. TAIR 10
Match: AT1G58460.1 (unknown protein; Has 35 Blast hits to 35 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 50.4 bits (119), Expect = 1.6e-06
Identity = 57/174 (32.76%), Postives = 81/174 (46.55%), Query Frame = 0


Query: 15  ESGWTMYFEESIETEERFRGSPVDYGGGEKEEEEERDLSMISDASSGPRNGYYEEKN--- 74
           +SGWTMY   S            DY  GE ++E + D SM+SDASSGP   YY E+    
Sbjct: 13  DSGWTMYLGHSSSVSLHH----FDYHNGETKQEHDEDSSMVSDASSGP--PYYCEETVHE 72

Query: 75  ----------CQSVSRSGGKLVAGKSKRQEEMGWRNQ-HSCLDDTASSPVFGLSKIRETN 134
                     C+S S++  K    K K  EE G+  + +S  DDTASS   G  ++    
Sbjct: 73  DHLQQNTQYWCKSKSKNKNK---NKKKVHEEQGYSERFNSSFDDTASSLPVG-EEVSAHK 132

Query: 135 PYRNEGLADNVKEFSQTHSRKH---GKKQTSFFQSS-SVKKLA-KNVSGDYQEQ 170
            ++N+       +F Q++S +     K  + F Q +  V KLA  N  GD Q +
Sbjct: 133 QHQNQ--YQRFHDFCQSYSTRRICKEKVNSGFLQQAFPVDKLALDNQGGDNQRK 174

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BLAST of CsaV3_2G026020 vs. TAIR 10
Match: AT1G26210.1 (SOB five-like 1 )

HSP 1 Score: 42.0 bits (97), Expect = 5.7e-04
Identity = 34/124 (27.42%), Postives = 55/124 (44.35%), Query Frame = 0


Query: 12  SGCESGWTMYFEESI---------------ETEERFRGSPVDYGGGEKEE---EEERDLS 71
           S CESGWTMY E++                +T+ +      +   G+  +   +EE D S
Sbjct: 16  SSCESGWTMYIEDAFHGNDQSSVVVDDDDDDTQVKEADDGYENDDGDTSDDGGDEESDDS 75

Query: 72  MISDASSGPRNGYYEEKNCQSVSRSGGKLVAGKSKRQEEMGWRNQHSCLDDTASSPVFGL 118
           M SDASSGP N   +  N  +  ++G K V  + ++  E    N+    D  A +     
Sbjct: 76  MASDASSGPSNQLPKHINKHAARKNGSKQVYLQKRQHTEKTISNEGEKSDLKARTRTSAA 135

The following BLAST results are available for this feature:

BLAST of CsaV3_2G026020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142900.1	3.7e-90	100.00	uncharacterized protein LOC101210927 [Cucumis sativus] >KGN62436.1 hypothetical ...	[more]
XP_008444534.1	2.7e-80	93.53	PREDICTED: uncharacterized protein LOC103487825 [Cucumis melo]	[more]
XP_038886134.1	1.1e-68	83.63	uncharacterized protein LOC120076391 isoform X2 [Benincasa hispida]	[more]
XP_038886133.1	1.4e-65	83.13	uncharacterized protein LOC120076391 isoform X1 [Benincasa hispida]	[more]
XP_022997597.1	9.3e-65	77.46	uncharacterized protein LOC111492483 [Cucurbita maxima]	[more]

BLAST of CsaV3_2G026020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9K4	2.8e-11	34.36	Protein SOB FIVE-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=SOFL5 PE=2 SV=1	[more]
B6IDH8	2.3e-05	32.76	Protein SOB FIVE-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=SOFL6 PE=2 SV=1	[more]

BLAST of CsaV3_2G026020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LR31	1.8e-90	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354620 PE=3 SV=1	[more]
A0A1S3BBA3	1.3e-80	93.53	uncharacterized protein LOC103487825 OS=Cucumis melo OX=3656 GN=LOC103487825 PE=...	[more]
A0A6J1K5J3	4.5e-65	77.46	uncharacterized protein LOC111492483 OS=Cucurbita maxima OX=3661 GN=LOC111492483...	[more]
A0A6J1HFC4	5.9e-65	78.49	uncharacterized protein LOC111462920 OS=Cucurbita moschata OX=3662 GN=LOC1114629...	[more]
A0A6J1BRF5	1.0e-48	65.14	uncharacterized protein LOC111005036 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of CsaV3_2G026020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33800.1	2.0e-12	34.36	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]
AT1G58460.1	1.6e-06	32.76	unknown protein; Has 35 Blast hits to 35 proteins in 8 species: Archae - 0; Bact...	[more]
AT1G26210.1	5.7e-04	27.42	SOB five-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..169
None	No IPR available	PANTHER	PTHR33347:SF40	SUBFAMILY NOT NAMED	coord: 7..166
IPR044670	SOB-five-Like (SOFL) family	PANTHER	PTHR33347	OSJNBA0091C07.3 PROTEIN	coord: 7..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G026020.1	CsaV3_2G026020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009691	cytokinin biosynthetic process
biological_process	GO:0009690	cytokinin metabolic process