CsaV3_2G024680 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G024680
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr2: 17112523 .. 17112903 (-)
RNA-Seq ExpressionCsaV3_2G024680
SyntenyCsaV3_2G024680
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTCCCCCGGCTGAGACAGAACGTTTCCTTAACGGCCTTGCATTGAAGGGTTCGTTGTCATTGGTGGTTCAGGAAGCAAATGGTGAGCAGCGTCATTGTCTATAAAATAAAAGAGAAATACATTCAACATTTGCCTGAATGTTTGATAGCGCTCTTCCCCTTTTAGGCAGAGGACCATGTACAGCAACAACCAGTTCAAAGAAAAACGATGGATCTAATATTGCAGAATTGGGACACCAAATTCATGTGATCTTCCGTCGAGGTATCTGCCATGGGTTCAATGTCCAATTCAAAGCTAGAAGCATCATCTGCAATTTGTCATCACTAGGTCTGGATACCTTGGGATTTCTCTCAACTGTACAAGTCACAGCTGCAACTTAA

mRNA sequence

GTTCCCCCGGCTGAGACAGAACGTTTCCTTAACGGCCTTGCATTGAAGGGTTCGTTGTCATTGGTGGTTCAGGAAGCAAATGGCAGAGGACCATGTACAGCAACAACCAGTTCAAAGAAAAACGATGGATCTAATATTGCAGAATTGGGACACCAAATTCATGTGATCTTCCGTCGAGGTATCTGCCATGGGTTCAATGTCCAATTCAAAGCTAGAAGCATCATCTGCAATTTGTCATCACTAGGTCTGGATACCTTGGGATTTCTCTCAACTGTACAAGTCACAGCTGCAACTTAA

Coding sequence (CDS)

GTTCCCCCGGCTGAGACAGAACGTTTCCTTAACGGCCTTGCATTGAAGGGTTCGTTGTCATTGGTGGTTCAGGAAGCAAATGGCAGAGGACCATGTACAGCAACAACCAGTTCAAAGAAAAACGATGGATCTAATATTGCAGAATTGGGACACCAAATTCATGTGATCTTCCGTCGAGGTATCTGCCATGGGTTCAATGTCCAATTCAAAGCTAGAAGCATCATCTGCAATTTGTCATCACTAGGTCTGGATACCTTGGGATTTCTCTCAACTGTACAAGTCACAGCTGCAACTTAA

Protein sequence

VPPAETERFLNGLALKGSLSLVVQEANGRGPCTATTSSKKNDGSNIAELGHQIHVIFRRGICHGFNVQFKARSIICNLSSLGLDTLGFLSTVQVTAAT*
Homology
[Close]
BLAST of CsaV3_2G024680 vs. NCBI nr
Match: KAE8652037.1 (hypothetical protein Csa_018665, partial [Cucumis sativus])

HSP 1 Score: 197.2 bits (500), Expect = 6.6e-47
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0 

Query: 1  VPPAETERFLNGLALKGSLSLVVQEANGRGPCTATTSSKKNDGSNIAELGHQIHVIFRRG 60
          VPPAETERFLNGLALKGSLSLVVQEANGRGPCTATTSSKKNDGSNIAELGHQIHVIFRRG
Sbjct: 1  VPPAETERFLNGLALKGSLSLVVQEANGRGPCTATTSSKKNDGSNIAELGHQIHVIFRRG 60

Query: 61 ICHGFNVQFKARSIICNLSSLGLDTLGFLSTVQVTAAT 99
          ICHGFNVQFKARSIICNLSSLGLDTLGFLSTVQVTAAT
Sbjct: 61 ICHGFNVQFKARSIICNLSSLGLDTLGFLSTVQVTAAT 98

[Close]
BLAST of CsaV3_2G024680 vs. ExPASy TrEMBL
Match: A0A0A0LKG0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G348800 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 3.2e-47
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0 

Query: 1   VPPAETERFLNGLALKGSLSLVVQEANGRGPCTATTSSKKNDGSNIAELGHQIHVIFRRG 60
           VPPAETERFLNGLALKGSLSLVVQEANGRGPCTATTSSKKNDGSNIAELGHQIHVIFRRG
Sbjct: 47  VPPAETERFLNGLALKGSLSLVVQEANGRGPCTATTSSKKNDGSNIAELGHQIHVIFRRG 106

Query: 61  ICHGFNVQFKARSIICNLSSLGLDTLGFLSTVQVTAAT 99
           ICHGFNVQFKARSIICNLSSLGLDTLGFLSTVQVTAAT
Sbjct: 107 ICHGFNVQFKARSIICNLSSLGLDTLGFLSTVQVTAAT 144

The following BLAST results are available for this feature:
BLAST of CsaV3_2G024680 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8652037.16.6e-47100.00hypothetical protein Csa_018665, partial [Cucumis sativus][more]
BLAST of CsaV3_2G024680 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G024680 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LKG03.2e-47100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G348800 PE=4 SV=1[more]
BLAST of CsaV3_2G024680 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G024680.1CsaV3_2G024680.1mRNA