CsaV3_2G019640 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G019640
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr2: 15614569 .. 15615209 (-)
RNA-Seq ExpressionCsaV3_2G019640
SyntenyCsaV3_2G019640
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGCCACCGATGGATAGGGGTAAGTGTTTATTATGTTTTCCAATTGCAACAGAAGGCTACACGAAGATTACCTAAAAAAAAAATTGACATTTATTAGGGAGAAAAATGTATTTCTCACAAATTTGAAACCGCCTACCTATGTAGGTTGCACAAATTAAGCATGATGGATTAAGTTGCATTTGATAATTATTTGGAGTCCGAAGCCGTACGACTGGGACGAGTTTAAAGCCCTTCTTGTCTTCTTTTTATCTCGGCTCTGTATTGCGATCACTGTCACTCACTTCCCTCCGCCTTTGTGTGCCATTTCTGGACTCGCGCTCGCCTTCCAACTCTACCTTTTCCGGCACTGGGTTCCATTCCCGGCGACAGTCTTCAAGACAATTATTGTATTCTCTCTCTTCCCTTTCTCCTGCAATGGCTGGCCCTTTTTCTCTTCAGTTTTTTTTGTCTCTTTCTTATCTTTGCATGAAGGTGTCTGTGGTTTCTAGGGTATTTCATAGTTTTCATGCATCTCTTTAGAGCTCAGTATGTTTTGATCAGATTTTTCTCATCTCGGGAATGCTTCTTTGTGTTGTTCTGAGAATCCTCTCCCGTTCTACGAGCTGCATGGCTTTCGATTATTGGATCATTGTGCTTGA

mRNA sequence

ATGAAGCCACCGATGGATAGGGTCCGAAGCCGTACGACTGGGACGAGTTTAAAGCCCTTCTTGTCTTCTTTTTATCTCGGCTCTGTATTGCGATCACTGTCACTCACTTCCCTCCGCCTTTGTGTGCCATTTCTGGACTCGCGCTCGCCTTCCAACTCTACCTTTTCCGGCACTGGGTTCCATTCCCGGCGACAGTCTTCAAGACAATTATTGTATTCTCTCTCTTCCCTTTCTCCTGCAATGGCTGGCCCTTTTTCTCTTCAGTTTTTTTTGTCTCTTTCTTATCTTTGCATGAAGGTGTCTGTGGTTTCTAGGAATCCTCTCCCGTTCTACGAGCTGCATGGCTTTCGATTATTGGATCATTGTGCTTGA

Coding sequence (CDS)

ATGAAGCCACCGATGGATAGGGTCCGAAGCCGTACGACTGGGACGAGTTTAAAGCCCTTCTTGTCTTCTTTTTATCTCGGCTCTGTATTGCGATCACTGTCACTCACTTCCCTCCGCCTTTGTGTGCCATTTCTGGACTCGCGCTCGCCTTCCAACTCTACCTTTTCCGGCACTGGGTTCCATTCCCGGCGACAGTCTTCAAGACAATTATTGTATTCTCTCTCTTCCCTTTCTCCTGCAATGGCTGGCCCTTTTTCTCTTCAGTTTTTTTTGTCTCTTTCTTATCTTTGCATGAAGGTGTCTGTGGTTTCTAGGAATCCTCTCCCGTTCTACGAGCTGCATGGCTTTCGATTATTGGATCATTGTGCTTGA

Protein sequence

MKPPMDRVRSRTTGTSLKPFLSSFYLGSVLRSLSLTSLRLCVPFLDSRSPSNSTFSGTGFHSRRQSSRQLLYSLSSLSPAMAGPFSLQFFLSLSYLCMKVSVVSRNPLPFYELHGFRLLDHCA*
Homology
[Close]
BLAST of CsaV3_2G019640 vs. NCBI nr
Match: KGN62228.1 (hypothetical protein Csa_016940 [Cucumis sativus])

HSP 1 Score: 242.7 bits (618), Expect = 1.7e-60
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0 

Query: 1   MKPPMDRVRSRTTGTSLKPFLSSFYLGSVLRSLSLTSLRLCVPFLDSRSPSNSTFSGTGF 60
           MKPPMDRVRSRTTGTSLKPFLSSFYLGSVLRSLSLTSLRLCVPFLDSRSPSNSTFSGTGF
Sbjct: 1   MKPPMDRVRSRTTGTSLKPFLSSFYLGSVLRSLSLTSLRLCVPFLDSRSPSNSTFSGTGF 60

Query: 61  HSRRQSSRQLLYSLSSLSPAMAGPFSLQFFLSLSYLCMKVSVVSRNPLPFYELHGFRLLD 120
           HSRRQSSRQLLYSLSSLSPAMAGPFSLQFFLSLSYLCMKVSVVSRNPLPFYELHGFRLLD
Sbjct: 61  HSRRQSSRQLLYSLSSLSPAMAGPFSLQFFLSLSYLCMKVSVVSRNPLPFYELHGFRLLD 120

Query: 121 HCA 124
           HCA
Sbjct: 121 HCA 123

[Close]
BLAST of CsaV3_2G019640 vs. ExPASy TrEMBL
Match: A0A0A0LKA0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G336750 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 8.3e-61
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0 

Query: 1   MKPPMDRVRSRTTGTSLKPFLSSFYLGSVLRSLSLTSLRLCVPFLDSRSPSNSTFSGTGF 60
           MKPPMDRVRSRTTGTSLKPFLSSFYLGSVLRSLSLTSLRLCVPFLDSRSPSNSTFSGTGF
Sbjct: 1   MKPPMDRVRSRTTGTSLKPFLSSFYLGSVLRSLSLTSLRLCVPFLDSRSPSNSTFSGTGF 60

Query: 61  HSRRQSSRQLLYSLSSLSPAMAGPFSLQFFLSLSYLCMKVSVVSRNPLPFYELHGFRLLD 120
           HSRRQSSRQLLYSLSSLSPAMAGPFSLQFFLSLSYLCMKVSVVSRNPLPFYELHGFRLLD
Sbjct: 61  HSRRQSSRQLLYSLSSLSPAMAGPFSLQFFLSLSYLCMKVSVVSRNPLPFYELHGFRLLD 120

Query: 121 HCA 124
           HCA
Sbjct: 121 HCA 123

The following BLAST results are available for this feature:
BLAST of CsaV3_2G019640 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN62228.11.7e-60100.00hypothetical protein Csa_016940 [Cucumis sativus][more]
BLAST of CsaV3_2G019640 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G019640 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LKA08.3e-61100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G336750 PE=4 SV=1[more]
BLAST of CsaV3_2G019640 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G019640.1CsaV3_2G019640.1mRNA