CsaV3_2G017290 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_2G017290
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	protein RALF-like 34
Location	chr2: 14405487 .. 14407318 (-)
RNA-Seq Expression	CsaV3_2G017290
Synteny	CsaV3_2G017290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTAAATATTTGAGAGTTGAATTATATTTATGAAAATTAACGATACTTTTGGTATATTTGAAAACCGACACTAAAAAACAAGAAATAAAAAAAAAATGGAGGGACGCGTAGGGAAGGAGTGAAGAGGTGGGCATTGATTAACCACAGCTGTACTCCAATCACACTCTCACTCTCTTCTCCTCCATCTTCATGTGACATTCATCTCTCTCTCTCTAAACCCCCCCATCTCCTCCTTCTCTCCCTTCCCCAAATCTCCAATGGCTTCCAAATCCCTCCTCTTCCCCCTCTTCACCCTCCTCCTCCTCTTCCTCTCTTCCTCCTCCGCCCACCTCTCCGTCGACACCTCCCTCAAACTCATGGCCGACGCCCTCGAATGGCCCACCACCACTTCCCTCATCCAATCCCCCACTGAAGACGACCTCGACGACGATCTCGACCTACAACAAGACCCCCGCAGATCTCTCTTCTGGAGGCGAGTCCACTACTACATTTCCTACGGTGCCCTCTCCGCCAACCGGATCCCTTGCCCACCCCGCTCCGGCCGCCCTTACTACACTCATAACTGCTACAAAGCTCGTGGCCCTGTCAATCCTTACACCCGCGGCTGCTCCGCCATCACTCGCTGCCGCCGCTGATCTCTCTCTCTCTCTCTTGTAAAACCCCGTCGTATCCCCCCTCTACTCCGAATTTCTTCCTCTCCTCTTTGTTTTGTCGTTTTTTTTTTAGTGCCTTGGAGTTCGACAACGGAGACGACATGTAGTTTTGGGGATTTCCTTATTTTATATTACTTTTTTGTTTATTGTTCCGCAATCTAGGGTCCGGAAAACGACGTGGTTTTGTTGGTTGGCTATTTAATTATGATAATGATGTGTACTTTTATATCTGAACAAGATTATATAAATTCAAGATTGTTTTATCATTATCATTACTTCCTAATTATATTTTAATCATAGATTGATGCTCTAATTACGCCCGAGTGTCGGTGGACGCTGCTCTTTTATGTTTAATTAATTTATCTAATCTTTCGTAAATTGTTTTCATGATTCTGAGGCATTGTCAGCATTTTTAATCTCACATTCCTAATTTCTCAATGCATGTTATCTTATTAGAGATCGAAAATCAAAAGTGATAATCCAACTAATGAATTCACGAGGTGATCTCTTTTGAGTTTGGTTTGTAATACTAACTTCATTTCATTCTTTTCTTTTACATTTCTCAATTTTATTTTTGATTTCTCTTGTGCATCCAAAAATCGATTACTTTCCAACGTTCTTTAACGAAATTAAAAAAATATGACCATTTGGTTGTATTGTTTAGTTTGTACTTCTATTCTATTATGATTGTTGAAGCTTTCTAATTGAATACAATAATTAACTTTACCTTTCCATCACATAATATCTTTAATATTGTACACATAAAGTAGTTGGAGTAAGTGTTAGATTAATAGAATGATATTTATGGCTAACGTATCTTGTTACCAACATTTACAAAATCTAAAAAACTAGATAGATTTGTAAAACATGATTTTGTTTTGTTTTGTTTTTCCTTTTTCTAGATAAGAAGGCAAAAGTGATTACCAAAAAACAGTTAGAAAAAGTACTTTTCTTTAACCAGAAAGTGTTCTTTTTAAAAAAAAAAAAAATTTGAAAATGTATATGTTGGGTATTCAATGCAGTGGAAATTATATGAAAGGAAGTAGCCTTTTGATGTCTTTTATATTCAAATAATAGTTTTGTTAGGTGTAAATTGTAATACAAATGAATAATTTGAAAATAATTCTACAAGACTCATGAGAAATGGTTTACTATAGTATGCACAATTTATTATTGCAA

mRNA sequence

ATGGCTTCCAAATCCCTCCTCTTCCCCCTCTTCACCCTCCTCCTCCTCTTCCTCTCTTCCTCCTCCGCCCACCTCTCCGTCGACACCTCCCTCAAACTCATGGCCGACGCCCTCGAATGGCCCACCACCACTTCCCTCATCCAATCCCCCACTGAAGACGACCTCGACGACGATCTCGACCTACAACAAGACCCCCGCAGATCTCTCTTCTGGAGGCGAGTCCACTACTACATTTCCTACGGTGCCCTCTCCGCCAACCGGATCCCTTGCCCACCCCGCTCCGGCCGCCCTTACTACACTCATAACTGCTACAAAGCTCGTGGCCCTGTCAATCCTTACACCCGCGGCTGCTCCGCCATCACTCGCTGCCGCCGCTGA

Coding sequence (CDS)

ATGGCTTCCAAATCCCTCCTCTTCCCCCTCTTCACCCTCCTCCTCCTCTTCCTCTCTTCCTCCTCCGCCCACCTCTCCGTCGACACCTCCCTCAAACTCATGGCCGACGCCCTCGAATGGCCCACCACCACTTCCCTCATCCAATCCCCCACTGAAGACGACCTCGACGACGATCTCGACCTACAACAAGACCCCCGCAGATCTCTCTTCTGGAGGCGAGTCCACTACTACATTTCCTACGGTGCCCTCTCCGCCAACCGGATCCCTTGCCCACCCCGCTCCGGCCGCCCTTACTACACTCATAACTGCTACAAAGCTCGTGGCCCTGTCAATCCTTACACCCGCGGCTGCTCCGCCATCACTCGCTGCCGCCGCTGA

Protein sequence

MASKSLLFPLFTLLLLFLSSSSAHLSVDTSLKLMADALEWPTTTSLIQSPTEDDLDDDLDLQQDPRRSLFWRRVHYYISYGALSANRIPCPPRSGRPYYTHNCYKARGPVNPYTRGCSAITRCRR*

Homology

[Close]

BLAST of CsaV3_2G017290 vs. NCBI nr
Match: XP_004148071.1 (protein RALF-like 34 [Cucumis sativus] >KGN62052.1 hypothetical protein Csa_006565 [Cucumis sativus])

HSP 1 Score: 255.8 bits (652), Expect = 2.0e-64
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 1   MASKSLLFPLFTLLLLFLSSSSAHLSVDTSLKLMADALEWPTTTSLIQSPTEDDLDDDLD 60
           MASKSLLFPLFTLLLLFLSSSSAHLSVDTSLKLMADALEWPTTTSLIQSPTEDDLDDDLD
Sbjct: 1   MASKSLLFPLFTLLLLFLSSSSAHLSVDTSLKLMADALEWPTTTSLIQSPTEDDLDDDLD 60

Query: 61  LQQDPRRSLFWRRVHYYISYGALSANRIPCPPRSGRPYYTHNCYKARGPVNPYTRGCSAI 120
           LQQDPRRSLFWRRVHYYISYGALSANRIPCPPRSGRPYYTHNCYKARGPVNPYTRGCSAI
Sbjct: 61  LQQDPRRSLFWRRVHYYISYGALSANRIPCPPRSGRPYYTHNCYKARGPVNPYTRGCSAI 120

Query: 121 TRCRR 126
           TRCRR
Sbjct: 121 TRCRR 125

[Close]

BLAST of CsaV3_2G017290 vs. NCBI nr
Match: XP_008457868.1 (PREDICTED: protein RALF-like 34 [Cucumis melo])

HSP 1 Score: 249.2 bits (635), Expect = 1.9e-62
Identity = 122/125 (97.60%), Postives = 124/125 (99.20%), Query Frame = 0


Query: 1   MASKSLLFPLFTLLLLFLSSSSAHLSVDTSLKLMADALEWPTTTSLIQSPTEDDLDDDLD 60
           MASKSLLF LFTLLLLFLSSSSAHLSVDTSLKLMADALEWPTTTSLIQSPT+DDLDDDLD
Sbjct: 1   MASKSLLFLLFTLLLLFLSSSSAHLSVDTSLKLMADALEWPTTTSLIQSPTDDDLDDDLD 60

Query: 61  LQQDPRRSLFWRRVHYYISYGALSANRIPCPPRSGRPYYTHNCYKARGPVNPYTRGCSAI 120
           LQQDPRRSLFWRRVHYYISYGALSANRIPCPPRSGRPYYTHNCYKARGPVNPY+RGCSAI
Sbjct: 61  LQQDPRRSLFWRRVHYYISYGALSANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSAI 120

Query: 121 TRCRR 126
           TRCRR
Sbjct: 121 TRCRR 125

[Close]

BLAST of CsaV3_2G017290 vs. NCBI nr
Match: XP_038900702.1 (protein RALF-like 34 [Benincasa hispida])

HSP 1 Score: 217.6 bits (553), Expect = 6.0e-53
Identity = 111/126 (88.10%), Postives = 118/126 (93.65%), Query Frame = 0


Query: 1   MASKSLLFPLFTLLLLFLSSSSAHLSVDTSLKLMADALEWPTTTSLIQSPTEDDLDDD-L 60
           MASK LL  LFT +LLF+SSSSAHLSVDTSLKLMADALEWPTTTSLI+S T  D+DDD L
Sbjct: 1   MASKFLLL-LFT-ILLFISSSSAHLSVDTSLKLMADALEWPTTTSLIESATATDIDDDEL 60

Query: 61  DLQQDPRRSLFWRRVHYYISYGALSANRIPCPPRSGRPYYTHNCYKARGPVNPYTRGCSA 120
           DL+QDPRRSLFWRRVHYYISYGAL+ANRIPCPPRSGRPYYTHNCYKARGPVNPY+RGCSA
Sbjct: 61  DLEQDPRRSLFWRRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSA 120

Query: 121 ITRCRR 126
           ITRCRR
Sbjct: 121 ITRCRR 124

[Close]

BLAST of CsaV3_2G017290 vs. NCBI nr
Match: XP_022928024.1 (protein RALF-like 34 [Cucurbita moschata])

HSP 1 Score: 200.7 bits (509), Expect = 7.6e-48
Identity = 102/128 (79.69%), Postives = 109/128 (85.16%), Query Frame = 0


Query: 1   MASKSLLFPLFTLLLLFLSSSSAHLSVDTSLKLMADALEWPTTTSLIQSPTEDDLDDDL- 60
           MASK LLFP FT+LLL LS++SAHL VDTSLKLMADALEWPTT S+     + D D D  
Sbjct: 1   MASK-LLFPFFTILLLLLSAASAHLPVDTSLKLMADALEWPTTISIPDLDHDHDHDHDHD 60

Query: 61  --DLQQDPRRSLFWRRVHYYISYGALSANRIPCPPRSGRPYYTHNCYKARGPVNPYTRGC 120
             DL QDPRRSLFW RVHYYISYGAL+ANRIPCPPRSGRPYYTHNCYKARGPVNPY+RGC
Sbjct: 61  HDDLHQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGC 120

Query: 121 SAITRCRR 126
           SAITRCRR
Sbjct: 121 SAITRCRR 127

[Close]

BLAST of CsaV3_2G017290 vs. NCBI nr
Match: XP_023513191.1 (protein RALF-like 34 [Cucurbita pepo subsp. pepo] >KAG7011171.1 Protein RALF-like 34, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 200.7 bits (509), Expect = 7.6e-48
Identity = 102/125 (81.60%), Postives = 108/125 (86.40%), Query Frame = 0


Query: 1   MASKSLLFPLFTLLLLFLSSSSAHLSVDTSLKLMADALEWPTTTSLIQSPTEDDLDDDLD 60
           MASK LLFP FT+LLL LS++SAHL VDTSLKLMADALEWPTT S+   P  D   D  D
Sbjct: 1   MASK-LLFPFFTILLLLLSAASAHLPVDTSLKLMADALEWPTTISI---PDLDHDHDHDD 60

Query: 61  LQQDPRRSLFWRRVHYYISYGALSANRIPCPPRSGRPYYTHNCYKARGPVNPYTRGCSAI 120
           L QDPRRSLFW RVHYYISYGAL+ANRIPCPPRSGRPYYTHNCYKARGPVNPY+RGCSAI
Sbjct: 61  LHQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSAI 120

Query: 121 TRCRR 126
           TRCRR
Sbjct: 121 TRCRR 121

[Close]

BLAST of CsaV3_2G017290 vs. ExPASy Swiss-Prot
Match: Q9FHA6 (Protein RALF-like 34 OS=Arabidopsis thaliana OX=3702 GN=RALFL34 PE=2 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 3.3e-30
Identity = 72/130 (55.38%), Postives = 90/130 (69.23%), Query Frame = 0


Query: 1   MASKSLLFPLFTLLLLFLS-SSSAHLSVDTSLKLMADALEWPTTTS----LIQSPTEDDL 60
           MA+ SL   L   LL F+S   S  LS + SL L+ D  +WP + S    +I      ++
Sbjct: 1   MAASSLNLLLILSLLTFISLQRSESLSDNPSLTLLPDGFDWPISHSDEFDIIDGEESFEV 60

Query: 61  DDDLDLQQDPRRSLFWRRVHYYISYGALSANRIPCPPRSGRPYYTHNCYKARGPVNPYTR 120
            ++ D   D RRSL+WRR  YYISYGALSANR+PCPPRSGR YYTHNC++ARGPV+PY+R
Sbjct: 61  TEEDDGVTD-RRSLYWRRTKYYISYGALSANRVPCPPRSGRSYYTHNCFRARGPVHPYSR 120

Query: 121 GCSAITRCRR 126
           GCS+ITRCRR
Sbjct: 121 GCSSITRCRR 129

[Close]

BLAST of CsaV3_2G017290 vs. ExPASy Swiss-Prot
Match: Q945T0 (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 8.0e-08
Identity = 32/69 (46.38%), Postives = 40/69 (57.97%), Query Frame = 0


Query: 56  DDDLDLQQDPRRSLFWRRVHYYISYGALSANRIPCPPRSGRPYYTHNCYKARGPVNPYTR 115
           +++ +L  +  R +       YISYGAL  N +PC  R G  YY  NC K     NPY+R
Sbjct: 52  EEEFELDSESNRRIL--ATKKYISYGALQKNSVPC-SRRGASYY--NC-KPGAQANPYSR 111

Query: 116 GCSAITRCR 125
           GCSAITRCR
Sbjct: 112 GCSAITRCR 114

[Close]

BLAST of CsaV3_2G017290 vs. ExPASy Swiss-Prot
Match: Q0V822 (Protein RALF-like 26 OS=Arabidopsis thaliana OX=3702 GN=RALFL26 PE=3 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 2.2e-05
Identity = 25/54 (46.30%), Postives = 33/54 (61.11%), Query Frame = 0


Query: 72  RRVHYYISYGALSANRIPCPPRSGRPYYTHNCYKARGPVNPYTRGCSAITRCRR 126
           R+   Y++ G L   R P PP    P+ +H  +K R PV+ Y+RGCS ITRCRR
Sbjct: 23  RKGRKYLNPGVLDRCRGPNPPAGCHPHNSH--HKPRVPVHNYSRGCSRITRCRR 74

[Close]

BLAST of CsaV3_2G017290 vs. ExPASy TrEMBL
Match: A0A0A0LMS2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G292820 PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 9.7e-65
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 1   MASKSLLFPLFTLLLLFLSSSSAHLSVDTSLKLMADALEWPTTTSLIQSPTEDDLDDDLD 60
           MASKSLLFPLFTLLLLFLSSSSAHLSVDTSLKLMADALEWPTTTSLIQSPTEDDLDDDLD
Sbjct: 1   MASKSLLFPLFTLLLLFLSSSSAHLSVDTSLKLMADALEWPTTTSLIQSPTEDDLDDDLD 60

Query: 61  LQQDPRRSLFWRRVHYYISYGALSANRIPCPPRSGRPYYTHNCYKARGPVNPYTRGCSAI 120
           LQQDPRRSLFWRRVHYYISYGALSANRIPCPPRSGRPYYTHNCYKARGPVNPYTRGCSAI
Sbjct: 61  LQQDPRRSLFWRRVHYYISYGALSANRIPCPPRSGRPYYTHNCYKARGPVNPYTRGCSAI 120

Query: 121 TRCRR 126
           TRCRR
Sbjct: 121 TRCRR 125

[Close]

BLAST of CsaV3_2G017290 vs. ExPASy TrEMBL
Match: A0A1S3C7S7 (protein RALF-like 34 OS=Cucumis melo OX=3656 GN=LOC103497450 PE=3 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 9.1e-63
Identity = 122/125 (97.60%), Postives = 124/125 (99.20%), Query Frame = 0


Query: 1   MASKSLLFPLFTLLLLFLSSSSAHLSVDTSLKLMADALEWPTTTSLIQSPTEDDLDDDLD 60
           MASKSLLF LFTLLLLFLSSSSAHLSVDTSLKLMADALEWPTTTSLIQSPT+DDLDDDLD
Sbjct: 1   MASKSLLFLLFTLLLLFLSSSSAHLSVDTSLKLMADALEWPTTTSLIQSPTDDDLDDDLD 60

Query: 61  LQQDPRRSLFWRRVHYYISYGALSANRIPCPPRSGRPYYTHNCYKARGPVNPYTRGCSAI 120
           LQQDPRRSLFWRRVHYYISYGALSANRIPCPPRSGRPYYTHNCYKARGPVNPY+RGCSAI
Sbjct: 61  LQQDPRRSLFWRRVHYYISYGALSANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSAI 120

Query: 121 TRCRR 126
           TRCRR
Sbjct: 121 TRCRR 125

[Close]

BLAST of CsaV3_2G017290 vs. ExPASy TrEMBL
Match: A0A6J1EJN3 (protein RALF-like 34 OS=Cucurbita moschata OX=3662 GN=LOC111434934 PE=3 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.7e-48
Identity = 102/128 (79.69%), Postives = 109/128 (85.16%), Query Frame = 0


Query: 1   MASKSLLFPLFTLLLLFLSSSSAHLSVDTSLKLMADALEWPTTTSLIQSPTEDDLDDDL- 60
           MASK LLFP FT+LLL LS++SAHL VDTSLKLMADALEWPTT S+     + D D D  
Sbjct: 1   MASK-LLFPFFTILLLLLSAASAHLPVDTSLKLMADALEWPTTISIPDLDHDHDHDHDHD 60

Query: 61  --DLQQDPRRSLFWRRVHYYISYGALSANRIPCPPRSGRPYYTHNCYKARGPVNPYTRGC 120
             DL QDPRRSLFW RVHYYISYGAL+ANRIPCPPRSGRPYYTHNCYKARGPVNPY+RGC
Sbjct: 61  HDDLHQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGC 120

Query: 121 SAITRCRR 126
           SAITRCRR
Sbjct: 121 SAITRCRR 127

[Close]

BLAST of CsaV3_2G017290 vs. ExPASy TrEMBL
Match: A0A6I9RRR4 (protein RALF-like 34 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105051946 PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 2.3e-34
Identity = 79/129 (61.24%), Postives = 96/129 (74.42%), Query Frame = 0


Query: 6   LLFPLFTLLLLFLSSSSAHLSV-DTSLKLMADALEWPTTTSLIQSPT--------EDDLD 65
           L F L  ++L+F  S +    + D+SL+LM DA+EWPTTTSL  S +        E +LD
Sbjct: 7   LCFSLLVVVLVFSPSQNVEAEMDDSSLQLMTDAMEWPTTTSLYSSSSYPFGYEGDEGELD 66

Query: 66  DDLDLQQDPRRSLFWRRVHYYISYGALSANRIPCPPRSGRPYYTHNCYKARGPVNPYTRG 125
           +D    +D RR+LFWRR+ YYISYGALSANR+PCPPRSGR YYTHNCY+ARGPV+PY RG
Sbjct: 67  ED---AKDNRRALFWRRIQYYISYGALSANRVPCPPRSGRSYYTHNCYRARGPVHPYHRG 126

[Close]

BLAST of CsaV3_2G017290 vs. ExPASy TrEMBL
Match: A0A6P4A840 (protein RALF-like 34 OS=Ziziphus jujuba OX=326968 GN=LOC107424509 PE=3 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 4.0e-34
Identity = 81/116 (69.83%), Postives = 90/116 (77.59%), Query Frame = 0


Query: 11  FTLLLLFLSSSSAHLSVDTSLKLMADALEWPTTTSLIQSPTE-DDLDDDLDLQQDPRRSL 70
           F +LL   S S A L  DTSLKLM+DALEWPTT S      E D+ ++D+D     RRSL
Sbjct: 15  FVILLGLCSFSDAQLD-DTSLKLMSDALEWPTTMSFYDELDEGDEEEEDVD-GAFGRRSL 74

Query: 71  FWRRVHYYISYGALSANRIPCPPRSGRPYYTHNCYKARGPVNPYTRGCSAITRCRR 126
           FWRR+ YYISYGALSANRIPCPPRSGR YYTHNC+KARGPV+PYTRGCS ITRCRR
Sbjct: 75  FWRRMRYYISYGALSANRIPCPPRSGRSYYTHNCFKARGPVHPYTRGCSRITRCRR 128

[Close]

BLAST of CsaV3_2G017290 vs. TAIR 10
Match: AT5G67070.1 (ralf-like 34 )

HSP 1 Score: 132.5 bits (332), Expect = 2.4e-31
Identity = 72/130 (55.38%), Postives = 90/130 (69.23%), Query Frame = 0


Query: 1   MASKSLLFPLFTLLLLFLS-SSSAHLSVDTSLKLMADALEWPTTTS----LIQSPTEDDL 60
           MA+ SL   L   LL F+S   S  LS + SL L+ D  +WP + S    +I      ++
Sbjct: 1   MAASSLNLLLILSLLTFISLQRSESLSDNPSLTLLPDGFDWPISHSDEFDIIDGEESFEV 60

Query: 61  DDDLDLQQDPRRSLFWRRVHYYISYGALSANRIPCPPRSGRPYYTHNCYKARGPVNPYTR 120
            ++ D   D RRSL+WRR  YYISYGALSANR+PCPPRSGR YYTHNC++ARGPV+PY+R
Sbjct: 61  TEEDDGVTD-RRSLYWRRTKYYISYGALSANRVPCPPRSGRSYYTHNCFRARGPVHPYSR 120

Query: 121 GCSAITRCRR 126
           GCS+ITRCRR
Sbjct: 121 GCSSITRCRR 129

[Close]

BLAST of CsaV3_2G017290 vs. TAIR 10
Match: AT2G33775.1 (ralf-like 19 )

HSP 1 Score: 58.9 bits (141), Expect = 3.3e-09
Identity = 41/89 (46.07%), Postives = 45/89 (50.56%), Query Frame = 0


Query: 40  WPTTTSLIQSPTEDDLDDDLDLQQDP---RRSLFWRRVHYYISYGALSANRIPCPPRSGR 99
           W  T S +        D +LD   D    RR L  RR   YISYGAL  N +PC  R GR
Sbjct: 25  WTLTKSCVNGQGCIGEDGELDYLMDSETNRRQLAARR--SYISYGALRKNNVPC-SRRGR 84

Query: 100 PYYTHNCYKARGPVNPYTRGCSAITRCRR 126
            YY  +C K R   NPY RGCS IT C R
Sbjct: 85  SYY--DC-KKRKRANPYRRGCSVITHCYR 107

[Close]

BLAST of CsaV3_2G017290 vs. TAIR 10
Match: AT1G28270.1 (ralf-like 4 )

HSP 1 Score: 50.8 bits (120), Expect = 9.1e-07
Identity = 47/129 (36.43%), Postives = 63/129 (48.84%), Query Frame = 0


Query: 1   MASKSLLFPLFTLLLLFLSSSSAHLSVDTSLKLMADALEWPTTTSLIQSP----TEDDLD 60
           M  K LL  +F LL+L + + S + +             +P T S I        +D+L+
Sbjct: 1   MGVKMLL--IFGLLILAMVAKSVNAT-------------YPLTKSCINGQGCIGEDDELE 60

Query: 61  DDLDLQQDPRRSLFWRRVHYYISYGALSANRIPCPPRSGRPYYTHNCYKARGPVNPYTRG 120
             +D + + R+    RR   YI Y AL  N +PC  R GR YY  +C K R   NPY RG
Sbjct: 61  SLMDSETNRRQLARGRR---YIGYDALKKNNVPC-SRRGRSYY--DCKKRRRN-NPYRRG 107

Query: 121 CSAITRCRR 126
           CSAIT C R
Sbjct: 121 CSAITHCYR 107

[Close]

BLAST of CsaV3_2G017290 vs. TAIR 10
Match: AT3G25170.1 (ralf-like 26 )

HSP 1 Score: 50.1 bits (118), Expect = 1.6e-06
Identity = 25/54 (46.30%), Postives = 33/54 (61.11%), Query Frame = 0


Query: 72  RRVHYYISYGALSANRIPCPPRSGRPYYTHNCYKARGPVNPYTRGCSAITRCRR 126
           R+   Y++ G L   R P PP    P+ +H  +K R PV+ Y+RGCS ITRCRR
Sbjct: 23  RKGRKYLNPGVLDRCRGPNPPAGCHPHNSH--HKPRVPVHNYSRGCSRITRCRR 74

[Close]

BLAST of CsaV3_2G017290 vs. TAIR 10
Match: AT1G02900.1 (rapid alkalinization factor 1 )

HSP 1 Score: 45.1 bits (105), Expect = 5.0e-05
Identity = 40/121 (33.06%), Postives = 55/121 (45.45%), Query Frame = 0


Query: 7   LFPLFTLLLLFLSSSSAHLSVDTSLKLMADALEWPTTTSLIQSPTEDDLDDDLDLQQDPR 66
           LF   T+L++F+ SS     V          + W TT     S     + + +  +++  
Sbjct: 7   LFLTLTILVVFIISSP---PVQAGFANDLGGVAWATTGD-NGSGCHGSIAECIGAEEEEM 66

Query: 67  RSLFWRRV---HYYISYGALSANRIPCPPRSGRPYYTHNCYKARGPVNPYTRGCSAITRC 125
            S   RR+     YISY +L  N +PC  R G  YY  NC       NPY+RGCS I RC
Sbjct: 67  DSEINRRILATTKYISYQSLKRNSVPC-SRRGASYY--NCQNG-AQANPYSRGCSKIARC 119

The following BLAST results are available for this feature:

BLAST of CsaV3_2G017290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148071.1	2.0e-64	100.00	protein RALF-like 34 [Cucumis sativus] >KGN62052.1 hypothetical protein Csa_0065...	[more]
XP_008457868.1	1.9e-62	97.60	PREDICTED: protein RALF-like 34 [Cucumis melo]	[more]
XP_038900702.1	6.0e-53	88.10	protein RALF-like 34 [Benincasa hispida]	[more]
XP_022928024.1	7.6e-48	79.69	protein RALF-like 34 [Cucurbita moschata]	[more]
XP_023513191.1	7.6e-48	81.60	protein RALF-like 34 [Cucurbita pepo subsp. pepo] >KAG7011171.1 Protein RALF-lik...	[more]

BLAST of CsaV3_2G017290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FHA6	3.3e-30	55.38	Protein RALF-like 34 OS=Arabidopsis thaliana OX=3702 GN=RALFL34 PE=2 SV=1	[more]
Q945T0	8.0e-08	46.38	Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1	[more]
Q0V822	2.2e-05	46.30	Protein RALF-like 26 OS=Arabidopsis thaliana OX=3702 GN=RALFL26 PE=3 SV=1	[more]

BLAST of CsaV3_2G017290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMS2	9.7e-65	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G292820 PE=3 SV=1	[more]
A0A1S3C7S7	9.1e-63	97.60	protein RALF-like 34 OS=Cucumis melo OX=3656 GN=LOC103497450 PE=3 SV=1	[more]
A0A6J1EJN3	3.7e-48	79.69	protein RALF-like 34 OS=Cucurbita moschata OX=3662 GN=LOC111434934 PE=3 SV=1	[more]
A0A6I9RRR4	2.3e-34	61.24	protein RALF-like 34 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105051946 P...	[more]
A0A6P4A840	4.0e-34	69.83	protein RALF-like 34 OS=Ziziphus jujuba OX=326968 GN=LOC107424509 PE=3 SV=1	[more]

BLAST of CsaV3_2G017290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67070.1	2.4e-31	55.38	ralf-like 34	[more]
AT2G33775.1	3.3e-09	46.07	ralf-like 19	[more]
AT1G28270.1	9.1e-07	36.43	ralf-like 4	[more]
AT3G25170.1	1.6e-06	46.30	ralf-like 26	[more]
AT1G02900.1	5.0e-05	33.06	rapid alkalinization factor 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 66..125 e-value: 2.0E-20 score: 73.5
None	No IPR available	PANTHER	PTHR33136	RAPID ALKALINIZATION FACTOR-LIKE	coord: 3..125
None	No IPR available	PANTHER	PTHR33136:SF6	PROTEIN RALF-LIKE 34	coord: 3..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G017290.1	CsaV3_2G017290.1	mRNA