CsaV3_2G017150 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G017150
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2, 6-diaminopimelate ligase
Locationchr2: 14334696 .. 14337138 (+)
RNA-Seq ExpressionCsaV3_2G017150
SyntenyCsaV3_2G017150
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTTCTTCAAATATCTTCATAGAAACCCTAAAAGAAGAGTTGGGTTTTGATGTCGGACAGAGAGGAAACCGATTCGGACGCTCCCGAGGAGTTCACCGCCGAGCAGGTTGCTTATTTTTAACTTTATGTACTTCTCTTTGCTTCTTGTCAATGGCTCCTTAACGATTTGGAACTTCTTCTTCTTTTTTTTCTTGTTGCAGGGAGTACAACAAGATGAAGAGATTAGAAAAGTTCAAAAAGAAAGTAAGGCTAGGTGTGTATTCAATCCGCATTTCCCTTTAGTATATTGTATTTGATGTCGAATCTTGTGTTTTCGTTGTTCTTTCATTGATGATTTTACTGAGCTGTCTTTTGTAATATTTGATTATCCGTTTTGTTGGTTATATTTGAAGTTGTTTCTTTGAAGTGATTTGCCTGCTCTTAGGGTTGTGAAGAATATAGAGGAGTTTCTTCTTCAATTGTCTTTTTTGTATGAAAGGATTGTTTTTGTGAAAGGTTGCGGTATGCTATTTTGTTGGTCTTTGTGGTGAGAGGAATAAGGGAGAATCAATAGAGGATTAAGGGAGTTCTTCTAGCGATATTTGGTCCCTTATTAGATTCAATGTTTCCTTTTGGGTGTTGGTAATTAGGCCTTTTTTGTAATGATTTTGTACGTCATATTTTACTAAATTGGAGCTCCTTTTTGTAGTTTGAGTATATCTCATTTGTGGGTTTTATTTCTGTATGCCATTGCATTCTACTATTTTTCTCGTGGAACCTTCAATCATTCTTAAAGAGGCAACAAGTTGTTGGCCATGGCCTGCTAATGATATGTTCATAAAATTGAAGTGGAGTGGTAATGGGGAGTAAGTGCATACAAATTGACTTGAACATTGATTACCTTTTTTTGCTCTGCTCTTATTAGTTCATAAGTTTTATGTATTCTTTCGGCCCTTTGGTATATTTTGGCTTTGGGCAGTTCAGACGTTTCCTTAATGGGCTGCCTTCTCTTTTTTCATAGTTTGAATTAATAAGAATCAAACTTTTTGGTCACACCTGATATGATAATTTTCTTTAATTTAAAACAAACAAGGATCATGGCAAGGATCCAATGTACTGGACATTGCCAGTAGTTGGCTAGGATGGCTTATTGTGTCATGTCCATTGCTCTGGGGTGGACAATTGTTGTTCATTCTCAGAATCCAATGTACTTGGAATTCTTACAAGCCCGATATCCTAAACATTTGTGTCTGGTTATTGTGTTATTTTAACCATATGTAACCTTATTTTTTTGTAGGGTTATTCGTGAAGGAAAAGAACGTCGTAGACTATGGGCTGAAAAGAAAACACCACGCCCATCTAAAAAGGGTGAAATCGTTGAAGATTTAGCAGAACCTCCTAGAAATGACGACAAAATTAGCAAATTGGGAACGCTTCCTAGTAATATAGTCCAACTGCTTGTAGACCGTGAGAAGTATGTCTCTTCTCCTCTATTCATGTATTGCTGTGTAGATCATGATTTTGCCAAGTGACTAATATGGTATTCTCTCCATCTATAGACAAGTTTTCTCATCAGATTCGGGCGATGAAAAGCCAGCAATTAAACCAAAACAAAAGAGGAAGAAGACCAAAAGCTCCGGGTAAGGGACCAGACCTGATTTAGAATGTCACACCTATTAATTTTAATGTACTTTCTGATTTAGAATAGTCTCTTATTTATTTTAATGCAGGATTGAAACGGTTCTTTTAAATGAAAGAACACCATCTCATTGTTTACAGAACTCCTTGGAATTTTTGAAGAAAAGGAAGATGAATGTTGCAAGATCATCAACGGTTCTCAGCAATCCTAATCAAGCGTTCCGGCTACTTTCTTCATCTGGCTTACTAACGAAGAAATAGCATTTTTGTTTCGTAGTTTACTTATTGCATCTCTGTTAGTTTCGACAGGATAATGTAAAATTGTATTCGAGAATTGGTTGGCGAGGGCTACAAAGGTTGTTGAGTTCTTATAGTGGTCATACCATAATAGAAATTTAAAATGGTGGGAGCATCTGATGTTGGTACATTAATGGTTTTCATTATCTTGGTTCGATTACTAGTGGCTTGATTTGAATATGTTTAAAAGTTTTTTAAAAACTCATTTACCTAAGAAGTTGAAATAACTAAAAGAGAAATGTATACAGTTGATGACAAGCACTTGACTTTGGTAGGCAATAGAATCATGTAATTGTGGGGAAGGGTTTTTTATTCTTTGTTTGCTATAGAGCCTTTGCATCACGCACCCTACAGAAAGGTTTGGCTCTAGAATCGTTATTTTGTTCATCAAAACTACTCCCCAAGGTGGGACTTCACTCACACACACATTTGTGATCTTTGTTTTTCGACGTTGAGGGCTATTCGAAAATCCTCAATGTATCAATTGATATATGAATCTTTCTTTATGAAAGAGATATCCAACTTTTCA

mRNA sequence

ATGTCGGACAGAGAGGAAACCGATTCGGACGCTCCCGAGGAGTTCACCGCCGAGCAGGGAGTACAACAAGATGAAGAGATTAGAAAAGTTCAAAAAGAAAGTAAGGCTAGGGTTATTCGTGAAGGAAAAGAACGTCGTAGACTATGGGCTGAAAAGAAAACACCACGCCCATCTAAAAAGGGTGAAATCGTTGAAGATTTAGCAGAACCTCCTAGAAATGACGACAAAATTAGCAAATTGGGAACGCTTCCTAGTAATATAGTCCAACTGCTTGTAGACCGTGAGAAACAAGTTTTCTCATCAGATTCGGGCGATGAAAAGCCAGCAATTAAACCAAAACAAAAGAGGAAGAAGACCAAAAGCTCCGGGATTGAAACGGTTCTTTTAAATGAAAGAACACCATCTCATTGTTTACAGAACTCCTTGGAATTTTTGAAGAAAAGGAAGATGAATGTTGCAAGATCATCAACGGTTCTCAGCAATCCTAATCAAGCGTTCCGGCTACTTTCTTCATCTGGCTTACTAACGAAGAAATAG

Coding sequence (CDS)

ATGTCGGACAGAGAGGAAACCGATTCGGACGCTCCCGAGGAGTTCACCGCCGAGCAGGGAGTACAACAAGATGAAGAGATTAGAAAAGTTCAAAAAGAAAGTAAGGCTAGGGTTATTCGTGAAGGAAAAGAACGTCGTAGACTATGGGCTGAAAAGAAAACACCACGCCCATCTAAAAAGGGTGAAATCGTTGAAGATTTAGCAGAACCTCCTAGAAATGACGACAAAATTAGCAAATTGGGAACGCTTCCTAGTAATATAGTCCAACTGCTTGTAGACCGTGAGAAACAAGTTTTCTCATCAGATTCGGGCGATGAAAAGCCAGCAATTAAACCAAAACAAAAGAGGAAGAAGACCAAAAGCTCCGGGATTGAAACGGTTCTTTTAAATGAAAGAACACCATCTCATTGTTTACAGAACTCCTTGGAATTTTTGAAGAAAAGGAAGATGAATGTTGCAAGATCATCAACGGTTCTCAGCAATCCTAATCAAGCGTTCCGGCTACTTTCTTCATCTGGCTTACTAACGAAGAAATAG

Protein sequence

MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFSSDSGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK*
Homology
[Close]
BLAST of CsaV3_2G017150 vs. NCBI nr
Match: XP_004148046.1 (uncharacterized protein LOC101208336 [Cucumis sativus] >KGN62039.1 hypothetical protein Csa_006734 [Cucumis sativus])

HSP 1 Score: 329.3 bits (843), Expect = 2.0e-86
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0 

Query: 1   MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKK 60
           MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKK
Sbjct: 1   MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKK 60

Query: 61  GEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFSSDSGDEKPAIKPKQKRKKTK 120
           GEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFSSDSGDEKPAIKPKQKRKKTK
Sbjct: 61  GEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFSSDSGDEKPAIKPKQKRKKTK 120

Query: 121 SSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK 179
           SSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK
Sbjct: 121 SSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK 178

[Close]
BLAST of CsaV3_2G017150 vs. NCBI nr
Match: XP_008457855.1 (PREDICTED: uncharacterized protein LOC103497440 [Cucumis melo] >KAA0045851.1 uncharacterized protein E6C27_scaffold243G003840 [Cucumis melo var. makuwa] >TYK13737.1 uncharacterized protein E5676_scaffold299G002660 [Cucumis melo var. makuwa])

HSP 1 Score: 316.6 bits (810), Expect = 1.4e-82
Identity = 172/179 (96.09%), Postives = 176/179 (98.32%), Query Frame = 0 

Query: 1   MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKK 60
           MSDREETDSDAPEEFTAEQGVQQDEEIRKVQ ESKARVIREGKERRRLWAEKKTPRPSKK
Sbjct: 1   MSDREETDSDAPEEFTAEQGVQQDEEIRKVQNESKARVIREGKERRRLWAEKKTPRPSKK 60

Query: 61  GEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFSSDSGDEKPAIKPKQKRKKTK 120
           GEIVEDLAEPPRNDDK+SKLGTLPSN+VQLLVDREKQVFSSD GDEKPAIKPKQKRKKTK
Sbjct: 61  GEIVEDLAEPPRNDDKVSKLGTLPSNVVQLLVDREKQVFSSDLGDEKPAIKPKQKRKKTK 120

Query: 121 -SSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK 179
            SSGIETVLL+ERTPSHCLQNSLEFLKKRKMNVARSSTVL+NPNQAFRLLSSSGLLTKK
Sbjct: 121 SSSGIETVLLSERTPSHCLQNSLEFLKKRKMNVARSSTVLNNPNQAFRLLSSSGLLTKK 179

[Close]
BLAST of CsaV3_2G017150 vs. NCBI nr
Match: XP_038901892.1 (uncharacterized protein LOC120088571 [Benincasa hispida])

HSP 1 Score: 288.9 bits (738), Expect = 3.0e-74
Identity = 158/179 (88.27%), Postives = 166/179 (92.74%), Query Frame = 0 

Query: 1   MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKK 60
           MSDRE+TDSDAPEEFTAEQGVQQDEEIRKVQKESKARV+REGKERRRLWAEKKTPRPSKK
Sbjct: 1   MSDREDTDSDAPEEFTAEQGVQQDEEIRKVQKESKARVVREGKERRRLWAEKKTPRPSKK 60

Query: 61  GEIVEDLAEPPR-NDDKISKLGTLPSNIVQLLVDREKQVFSSDSGDEKPAIKPKQKRKKT 120
           GE VEDLAEPPR + D+ISKLG LPSNIVQLLVDREKQVFSSD  DEKPAIKPK KRKKT
Sbjct: 61  GETVEDLAEPPRDHHDQISKLGMLPSNIVQLLVDREKQVFSSDPSDEKPAIKPKSKRKKT 120

Query: 121 KSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK 179
           KSSGIETVLL+ERTPS CL NSLEFLKKRKMN+ RSS+VL NPNQA RLLS+SGLL KK
Sbjct: 121 KSSGIETVLLSERTPSQCLHNSLEFLKKRKMNITRSSSVLDNPNQALRLLSTSGLLIKK 179

[Close]
BLAST of CsaV3_2G017150 vs. NCBI nr
Match: KAG7035221.1 (hypothetical protein SDJN02_02016, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 271.2 bits (692), Expect = 6.5e-69
Identity = 146/178 (82.02%), Postives = 159/178 (89.33%), Query Frame = 0 

Query: 1   MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKK 60
           MSD  +TDSDAPEEFTAEQG+QQDEEIRKVQKES ARV+REGKERRR WAEKKTPR SKK
Sbjct: 1   MSDSNDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAEKKTPRASKK 60

Query: 61  GEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFSSDSGDEKPAIKPKQKRKKTK 120
           GE VED+AE PR++D++SKLG LPSN+VQLL +REKQVFSSD GDEKPA K K KRKK+K
Sbjct: 61  GETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTKRKKSK 120

Query: 121 SSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK 179
           SSGIETVLLNER PS CLQNSLEFLKKRKMN+ RSS+VL N NQA RLLSSSGLLTKK
Sbjct: 121 SSGIETVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK 178

[Close]
BLAST of CsaV3_2G017150 vs. NCBI nr
Match: KAG6605258.1 (hypothetical protein SDJN03_02575, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 269.6 bits (688), Expect = 1.9e-68
Identity = 145/178 (81.46%), Postives = 159/178 (89.33%), Query Frame = 0 

Query: 1   MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKK 60
           MSD  +TDSDAPEEFTAEQG+QQDEEIRKVQKES ARV+REGKERRR WAEKKTPR SKK
Sbjct: 1   MSDSNDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAEKKTPRASKK 60

Query: 61  GEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFSSDSGDEKPAIKPKQKRKKTK 120
           GE VED+AE PR++D++SKLG LPSN+VQLL +REKQVFSSD GDEKPA K K KRKK+K
Sbjct: 61  GETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTKRKKSK 120

Query: 121 SSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK 179
           SSGI+TVLLNER PS CLQNSLEFLKKRKMN+ RSS+VL N NQA RLLSSSGLLTKK
Sbjct: 121 SSGIKTVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK 178

[Close]
BLAST of CsaV3_2G017150 vs. ExPASy TrEMBL
Match: A0A0A0LM07 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G292200 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 9.8e-87
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0 

Query: 1   MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKK 60
           MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKK
Sbjct: 1   MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKK 60

Query: 61  GEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFSSDSGDEKPAIKPKQKRKKTK 120
           GEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFSSDSGDEKPAIKPKQKRKKTK
Sbjct: 61  GEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFSSDSGDEKPAIKPKQKRKKTK 120

Query: 121 SSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK 179
           SSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK
Sbjct: 121 SSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK 178

[Close]
BLAST of CsaV3_2G017150 vs. ExPASy TrEMBL
Match: A0A5A7TWK6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002660 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 6.6e-83
Identity = 172/179 (96.09%), Postives = 176/179 (98.32%), Query Frame = 0 

Query: 1   MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKK 60
           MSDREETDSDAPEEFTAEQGVQQDEEIRKVQ ESKARVIREGKERRRLWAEKKTPRPSKK
Sbjct: 1   MSDREETDSDAPEEFTAEQGVQQDEEIRKVQNESKARVIREGKERRRLWAEKKTPRPSKK 60

Query: 61  GEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFSSDSGDEKPAIKPKQKRKKTK 120
           GEIVEDLAEPPRNDDK+SKLGTLPSN+VQLLVDREKQVFSSD GDEKPAIKPKQKRKKTK
Sbjct: 61  GEIVEDLAEPPRNDDKVSKLGTLPSNVVQLLVDREKQVFSSDLGDEKPAIKPKQKRKKTK 120

Query: 121 -SSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK 179
            SSGIETVLL+ERTPSHCLQNSLEFLKKRKMNVARSSTVL+NPNQAFRLLSSSGLLTKK
Sbjct: 121 SSSGIETVLLSERTPSHCLQNSLEFLKKRKMNVARSSTVLNNPNQAFRLLSSSGLLTKK 179

[Close]
BLAST of CsaV3_2G017150 vs. ExPASy TrEMBL
Match: A0A1S3C749 (uncharacterized protein LOC103497440 OS=Cucumis melo OX=3656 GN=LOC103497440 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 6.6e-83
Identity = 172/179 (96.09%), Postives = 176/179 (98.32%), Query Frame = 0 

Query: 1   MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKK 60
           MSDREETDSDAPEEFTAEQGVQQDEEIRKVQ ESKARVIREGKERRRLWAEKKTPRPSKK
Sbjct: 1   MSDREETDSDAPEEFTAEQGVQQDEEIRKVQNESKARVIREGKERRRLWAEKKTPRPSKK 60

Query: 61  GEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFSSDSGDEKPAIKPKQKRKKTK 120
           GEIVEDLAEPPRNDDK+SKLGTLPSN+VQLLVDREKQVFSSD GDEKPAIKPKQKRKKTK
Sbjct: 61  GEIVEDLAEPPRNDDKVSKLGTLPSNVVQLLVDREKQVFSSDLGDEKPAIKPKQKRKKTK 120

Query: 121 -SSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK 179
            SSGIETVLL+ERTPSHCLQNSLEFLKKRKMNVARSSTVL+NPNQAFRLLSSSGLLTKK
Sbjct: 121 SSSGIETVLLSERTPSHCLQNSLEFLKKRKMNVARSSTVLNNPNQAFRLLSSSGLLTKK 179

[Close]
BLAST of CsaV3_2G017150 vs. ExPASy TrEMBL
Match: A0A6J1G7P4 (uncharacterized protein LOC111451498 OS=Cucurbita moschata OX=3662 GN=LOC111451498 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 2.1e-68
Identity = 145/178 (81.46%), Postives = 158/178 (88.76%), Query Frame = 0 

Query: 1   MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKK 60
           MSD  +TDSDAPEEFTAEQG+QQDEEIRKVQKES ARV+REGKERRR WAEKKTPR SKK
Sbjct: 1   MSDPNDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAEKKTPRASKK 60

Query: 61  GEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFSSDSGDEKPAIKPKQKRKKTK 120
            E VED+AE PR++D++SKLG LPSN+VQLL +REKQVFSSD GDEKPA K K KRKK+K
Sbjct: 61  SETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTKRKKSK 120

Query: 121 SSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK 179
           SSGIETVLLNER PS CLQNSLEFLKKRKMN+ RSS+VL N NQA RLLSSSGLLTKK
Sbjct: 121 SSGIETVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK 178

[Close]
BLAST of CsaV3_2G017150 vs. ExPASy TrEMBL
Match: A0A6J1DXW1 (uncharacterized protein LOC111025162 OS=Momordica charantia OX=3673 GN=LOC111025162 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 2.7e-68
Identity = 144/177 (81.36%), Postives = 158/177 (89.27%), Query Frame = 0 

Query: 1   MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKK 60
           MSD E+TDSDAPEEFTAEQG+QQD+EI KVQ ESKARV+REGKERRRLWAEKKTPRPSKK
Sbjct: 1   MSDGEDTDSDAPEEFTAEQGIQQDQEITKVQNESKARVVREGKERRRLWAEKKTPRPSKK 60

Query: 61  GEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFSSDSGDEKPAIKPKQKRKKTK 120
           GE VED+AE P + D+ SKLG LPSN+VQLL DREKQVFSSD GDEKPA KPK KRKKTK
Sbjct: 61  GETVEDVAEIPSHIDQSSKLGMLPSNLVQLLADREKQVFSSDPGDEKPAAKPKTKRKKTK 120

Query: 121 SSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTK 178
           SSGIETV+LN+R P+ CLQNS+EFLKKRKMN+ RSS+VL NPNQA R LSSSGLLTK
Sbjct: 121 SSGIETVVLNKRQPAQCLQNSMEFLKKRKMNIPRSSSVLDNPNQALRRLSSSGLLTK 177

[Close]
BLAST of CsaV3_2G017150 vs. TAIR 10
Match: AT4G37090.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 129.0 bits (323), Expect = 3.7e-30
Identity = 84/183 (45.90%), Postives = 117/183 (63.93%), Query Frame = 0 

Query: 1   MSDRE--ETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPS 60
           MSD +  ++DSDAPEE T EQ   ++E + K+Q+E+K RV RE KERR+L AE+ T R S
Sbjct: 1   MSDNKDRDSDSDAPEELTQEQAKLEEEALWKIQRENKNRVSREKKERRKLMAEQVTLRKS 60

Query: 61  KKGEIVEDLA---EPPRNDDKISKLGTLPSNIVQLLVDREKQVFSSDSGDEKPAIKPKQK 120
           +K EI+ED+    EP  N + ++  G L  +I+  L +REKQ   SDS +E+  I    +
Sbjct: 61  RKIEIIEDVVEEEEPEENSEALANKGFLSKDIIDFLAEREKQKAESDS-EEEEIIDELPR 120

Query: 121 RKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLL 179
           +KK KSSGIETV+  E  P  CL+  L+FLK R+  V RSS+V+ N  QA RL + + L 
Sbjct: 121 KKKQKSSGIETVIYKEIPPPECLKTGLDFLKMRRAQVPRSSSVIKNSGQALRLATGAALA 180

[Close]
BLAST of CsaV3_2G017150 vs. TAIR 10
Match: AT4G37090.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 124.4 bits (311), Expect = 9.2e-29
Identity = 84/183 (45.90%), Postives = 117/183 (63.93%), Query Frame = 0 

Query: 1   MSDRE--ETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPS 60
           MSD +  ++DSDAPEE T EQ   ++E + K+Q+E+K RV RE KERR+L AE+ T R S
Sbjct: 1   MSDNKDRDSDSDAPEELTQEQ--LEEEALWKIQRENKNRVSREKKERRKLMAEQVTLRKS 60

Query: 61  KKGEIVEDLA---EPPRNDDKISKLGTLPSNIVQLLVDREKQVFSSDSGDEKPAIKPKQK 120
           +K EI+ED+    EP  N + ++  G L  +I+  L +REKQ   SDS +E+  I    +
Sbjct: 61  RKIEIIEDVVEEEEPEENSEALANKGFLSKDIIDFLAEREKQKAESDS-EEEEIIDELPR 120

Query: 121 RKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLL 179
           +KK KSSGIETV+  E  P  CL+  L+FLK R+  V RSS+V+ N  QA RL + + L 
Sbjct: 121 KKKQKSSGIETVIYKEIPPPECLKTGLDFLKMRRAQVPRSSSVIKNSGQALRLATGAALA 180

The following BLAST results are available for this feature:
BLAST of CsaV3_2G017150 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004148046.12.0e-86100.00uncharacterized protein LOC101208336 [Cucumis sativus] >KGN62039.1 hypothetical ... [more]
XP_008457855.11.4e-8296.09PREDICTED: uncharacterized protein LOC103497440 [Cucumis melo] >KAA0045851.1 unc... [more]
XP_038901892.13.0e-7488.27uncharacterized protein LOC120088571 [Benincasa hispida][more]
KAG7035221.16.5e-6982.02hypothetical protein SDJN02_02016, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6605258.11.9e-6881.46hypothetical protein SDJN03_02575, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of CsaV3_2G017150 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G017150 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LM079.8e-87100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G292200 PE=4 SV=1[more]
A0A5A7TWK66.6e-8396.09Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3C7496.6e-8396.09uncharacterized protein LOC103497440 OS=Cucumis melo OX=3656 GN=LOC103497440 PE=... [more]
A0A6J1G7P42.1e-6881.46uncharacterized protein LOC111451498 OS=Cucurbita moschata OX=3662 GN=LOC1114514... [more]
A0A6J1DXW12.7e-6881.36uncharacterized protein LOC111025162 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
BLAST of CsaV3_2G017150 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G37090.13.7e-3045.90unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G37090.29.2e-2945.90unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..76
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 98..112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 98..123
NoneNo IPR availablePANTHERPTHR36387UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE-2, 6-DIAMINOPIMELATE LIGASEcoord: 4..176

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G017150.1CsaV3_2G017150.1mRNA