CsaV3_2G017080 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTGAAAGTTTAAACAATGGATGACAAATCTCTTCCTTATAACCTTCGACTAAGGAAAGATCACAAGTCTTCTTCTCCAACTGAACACTCCAAAACTCATAAACATGACAGAGATTTTCAGGTTTCATTATCATTATTCTTCTTTCTTTATTCTTTATTATTGTTTGAGTTATTATTAATTGTTAATATCAAATTTAGGAAAAGGCAAGTGATGATCAAATATATGTAAGTCATTTAATTGTGGATTATCGATGTGAAAAATGTGGATGCTCTTTTGATATTGAATCCTCTCTTAGCTCACACCATTGTAAAGTAAGCTTTTTTTTTTTAGTTTTTAATTTTTTTGAAATTTTGATATATTGATAAGTTTATTATAATAATTTTTTTTAGCAGAATAAAAATGAGAGAGAGGCAATGGAAATTGAAGGACATGGAATTTTGGGAGAGAACAAATCTTTCAGAAAAAAAAGCAGGAAGGGGGTACCAAGAAGAGC ATGGATGACAAATCTCTTCCTTATAACCTTCGACTAAGGAAAGATCACAAGTCTTCTTCTCCAACTGAACACTCCAAAACTCATAAACATGACAGAGATTTTCAGGAAAAGGCAAGTGATGATCAAATATATGTAAGTCATTTAATTGTGGATTATCGATGTGAAAAATGTGGATGCTCTTTTGATATTGAATCCTCTCTTAGCTCACACCATTGTAAAAATAAAAATGAGAGAGAGGCAATGGAAATTGAAGGACATGGAATTTTGGGAGAGAACAAATCTTTCAGAAAAAAAAGCAGGAAGGGGGTACCAAGAAGAGC ATGGATGACAAATCTCTTCCTTATAACCTTCGACTAAGGAAAGATCACAAGTCTTCTTCTCCAACTGAACACTCCAAAACTCATAAACATGACAGAGATTTTCAGGAAAAGGCAAGTGATGATCAAATATATGTAAGTCATTTAATTGTGGATTATCGATGTGAAAAATGTGGATGCTCTTTTGATATTGAATCCTCTCTTAGCTCACACCATTGTAAAAATAAAAATGAGAGAGAGGCAATGGAAATTGAAGGACATGGAATTTTGGGAGAGAACAAATCTTTCAGAAAAAAAAGCAGGAAGGGGGTACCAAGAAGAGC MDDKSLPYNLRLRKDHKSSSPTEHSKTHKHDRDFQEKASDDQIYVSHLIVDYRCEKCGCSFDIESSLSSHHCKNKNEREAMEIEGHGILGENKSFRKKSRKGVPRRX Homology
BLAST of CsaV3_2G017080 vs. NCBI nr
Match: KAE8651931.1 (hypothetical protein Csa_006531, partial [Cucumis sativus]) HSP 1 Score: 216.5 bits (550), Expect = 1.1e-52 Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0
BLAST of CsaV3_2G017080 vs. NCBI nr
Match: KAG6571418.1 (hypothetical protein SDJN03_30333, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 113.2 bits (282), Expect = 1.4e-21 Identity = 62/109 (56.88%), Postives = 81/109 (74.31%), Query Frame = 0
BLAST of CsaV3_2G017080 vs. NCBI nr
Match: XP_023511836.1 (uncharacterized protein LOC111776737 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 112.8 bits (281), Expect = 1.8e-21 Identity = 62/109 (56.88%), Postives = 81/109 (74.31%), Query Frame = 0
BLAST of CsaV3_2G017080 vs. NCBI nr
Match: KAG7011182.1 (hypothetical protein SDJN02_27980, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 111.7 bits (278), Expect = 4.0e-21 Identity = 61/109 (55.96%), Postives = 81/109 (74.31%), Query Frame = 0
BLAST of CsaV3_2G017080 vs. NCBI nr
Match: XP_022928048.1 (uncharacterized protein LOC111434950 [Cucurbita moschata]) HSP 1 Score: 111.7 bits (278), Expect = 4.0e-21 Identity = 61/109 (55.96%), Postives = 80/109 (73.39%), Query Frame = 0
BLAST of CsaV3_2G017080 vs. ExPASy TrEMBL
Match: A0A0A0LQ06 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G287130 PE=4 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 5.5e-53 Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0
BLAST of CsaV3_2G017080 vs. ExPASy TrEMBL
Match: A0A6J1EMR9 (uncharacterized protein LOC111434950 OS=Cucurbita moschata OX=3662 GN=LOC111434950 PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 1.9e-21 Identity = 61/109 (55.96%), Postives = 80/109 (73.39%), Query Frame = 0
BLAST of CsaV3_2G017080 vs. ExPASy TrEMBL
Match: A0A6J1D739 (uncharacterized protein LOC111017959 OS=Momordica charantia OX=3673 GN=LOC111017959 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 2.9e-17 Identity = 61/114 (53.51%), Postives = 75/114 (65.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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