CsaV3_2G016690 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G016690
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionATP-binding/protein serine/threonine kinase
Locationchr2: 13895796 .. 13896145 (-)
RNA-Seq ExpressionCsaV3_2G016690
SyntenyCsaV3_2G016690
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAAGCCCTTGACAAAGTTCGCTCTCTTCTTCCTAATGGTCTTCATTATCTCAGGTATATCAGTCGATTTGTATTGTTTATATATAGCCTTTTTTTTTCTTTTTGCAATAGTTATCTTTTTGTATGACAATTTAACAATTGTATCACTTCAGAAAAATTGTTCGTGTCAGATGCCAGAAATGTTGTAAACATTCCCTGCCAAAGTCGTATTGATTGTTCTGATCCATGGGACTGTGATTGCAAGCTCAACCTATGTTTTTGTCACCCACATGGATTGGAAAAGAAATTTCTTCACAAAGCCTTTCCAGAATCTTTGAGAGAAGATCGAAAAGGCAATGCTCCTTAA

mRNA sequence

ATGGTGAAGCCCTTGACAAAGTTCGCTCTCTTCTTCCTAATGGTCTTCATTATCTCAGAAAAATTGTTCGTGTCAGATGCCAGAAATGTTGTAAACATTCCCTGCCAAAGTCGTATTGATTGTTCTGATCCATGGGACTGTGATTGCAAGCTCAACCTATGTTTTTGTCACCCACATGGATTGGAAAAGAAATTTCTTCACAAAGCCTTTCCAGAATCTTTGAGAGAAGATCGAAAAGGCAATGCTCCTTAA

Coding sequence (CDS)

ATGGTGAAGCCCTTGACAAAGTTCGCTCTCTTCTTCCTAATGGTCTTCATTATCTCAGAAAAATTGTTCGTGTCAGATGCCAGAAATGTTGTAAACATTCCCTGCCAAAGTCGTATTGATTGTTCTGATCCATGGGACTGTGATTGCAAGCTCAACCTATGTTTTTGTCACCCACATGGATTGGAAAAGAAATTTCTTCACAAAGCCTTTCCAGAATCTTTGAGAGAAGATCGAAAAGGCAATGCTCCTTAA

Protein sequence

MVKPLTKFALFFLMVFIISEKLFVSDARNVVNIPCQSRIDCSDPWDCDCKLNLCFCHPHGLEKKFLHKAFPESLREDRKGNAP*
Homology
[Close]
BLAST of CsaV3_2G016690 vs. NCBI nr
Match: KGN61957.1 (hypothetical protein Csa_006779 [Cucumis sativus])

HSP 1 Score: 180.3 bits (456), Expect = 7.1e-42
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 

Query: 1  MVKPLTKFALFFLMVFIISEKLFVSDARNVVNIPCQSRIDCSDPWDCDCKLNLCFCHPHG 60
          MVKPLTKFALFFLMVFIISEKLFVSDARNVVNIPCQSRIDCSDPWDCDCKLNLCFCHPHG
Sbjct: 1  MVKPLTKFALFFLMVFIISEKLFVSDARNVVNIPCQSRIDCSDPWDCDCKLNLCFCHPHG 60

Query: 61 LEKKFLHKAFPESLREDRKGNAP 84
          LEKKFLHKAFPESLREDRKGNAP
Sbjct: 61 LEKKFLHKAFPESLREDRKGNAP 83

[Close]
BLAST of CsaV3_2G016690 vs. NCBI nr
Match: KAE8651915.1 (hypothetical protein Csa_006059 [Cucumis sativus])

HSP 1 Score: 136.0 bits (341), Expect = 1.5e-28
Identity = 63/78 (80.77%), Postives = 68/78 (87.18%), Query Frame = 0 

Query: 1  MVKPLTKFALFFLMVFIISEKLFVSDARNVVNIPCQSRIDCSDPWDCDCKLNLCFCHPHG 60
          MVK  TK AL  LM FIISE +FV++ARNVVNIPC SRIDCSDPWDCDCKLNLCFCHPHG
Sbjct: 1  MVKSSTKLALLLLMFFIISE-MFVANARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHG 60

Query: 61 LEKKFLHKAFPESLREDR 79
          LEKKFLH AFPE LRE++
Sbjct: 61 LEKKFLHNAFPEHLREEK 77

[Close]
BLAST of CsaV3_2G016690 vs. ExPASy TrEMBL
Match: A0A0A0LMG3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G276990 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 3.4e-42
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 

Query: 1  MVKPLTKFALFFLMVFIISEKLFVSDARNVVNIPCQSRIDCSDPWDCDCKLNLCFCHPHG 60
          MVKPLTKFALFFLMVFIISEKLFVSDARNVVNIPCQSRIDCSDPWDCDCKLNLCFCHPHG
Sbjct: 1  MVKPLTKFALFFLMVFIISEKLFVSDARNVVNIPCQSRIDCSDPWDCDCKLNLCFCHPHG 60

Query: 61 LEKKFLHKAFPESLREDRKGNAP 84
          LEKKFLHKAFPESLREDRKGNAP
Sbjct: 61 LEKKFLHKAFPESLREDRKGNAP 83

[Close]
BLAST of CsaV3_2G016690 vs. ExPASy TrEMBL
Match: A0A0A0LJR0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285280 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 4.4e-29
Identity = 64/78 (82.05%), Postives = 67/78 (85.90%), Query Frame = 0 

Query: 1  MVKPLTKFALFFLMVFIISEKLFVSDARNVVNIPCQSRIDCSDPWDCDCKLNLCFCHPHG 60
          MVK  TK AL  LM FIISE  FV+DARNVVNIPC SRIDCSDPWDCDCKLNLCFCHPHG
Sbjct: 1  MVKSSTKLALLLLMFFIISE-TFVADARNVVNIPCNSRIDCSDPWDCDCKLNLCFCHPHG 60

Query: 61 LEKKFLHKAFPESLREDR 79
          LEKKFLH AFPE LRE++
Sbjct: 61 LEKKFLHNAFPEHLREEK 77

[Close]
BLAST of CsaV3_2G016690 vs. ExPASy TrEMBL
Match: A0A2N9FRQ0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17804 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.7e-04
Identity = 33/77 (42.86%), Postives = 40/77 (51.95%), Query Frame = 0 

Query: 1  MVKPLTKFALFFLMVFIISEKLFVSDARNVVNIPCQSRIDCSDPWDCDCKLNLCFCHPHG 60
          M K   K AL  +++ I S   F  DARNVV IPC++  DC D   CDC  N C C   G
Sbjct: 1  MEKSSLKLALIVVLLLIASSFQFRVDARNVVVIPCETYNDCRDSAKCDCVHNHCRC--PG 60

Query: 61 LEKKFLHKAFPESLRED 78
           E+ F  KA    L+ D
Sbjct: 61 EEQDFFTKAITNHLKHD 75

[Close]
BLAST of CsaV3_2G016690 vs. ExPASy TrEMBL
Match: A0A1R3GI95 (ATP-binding/protein serine/threonine kinase OS=Corchorus olitorius OX=93759 GN=COLO4_35133 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 8.3e-04
Identity = 20/33 (60.61%), Postives = 26/33 (78.79%), Query Frame = 0 

Query: 26 DARNVVNIPCQSRIDCSDPWDCDCKLNLCFCHP 59
          +ARN +NIPC +  DC DP  C+C++NLCFCHP
Sbjct: 27 EARN-INIPCNTIKDCPDPVKCECRINLCFCHP 58

The following BLAST results are available for this feature:
BLAST of CsaV3_2G016690 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61957.17.1e-42100.00hypothetical protein Csa_006779 [Cucumis sativus][more]
KAE8651915.11.5e-2880.77hypothetical protein Csa_006059 [Cucumis sativus][more]
BLAST of CsaV3_2G016690 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G016690 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LMG33.4e-42100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G276990 PE=4 SV=1[more]
A0A0A0LJR04.4e-2982.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285280 PE=4 SV=1[more]
A0A2N9FRQ01.7e-0442.86Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17804 PE=4 SV=1[more]
A0A1R3GI958.3e-0460.61ATP-binding/protein serine/threonine kinase OS=Corchorus olitorius OX=93759 GN=C... [more]
BLAST of CsaV3_2G016690 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G016690.1CsaV3_2G016690.1mRNA