CsaV3_2G015960 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_2G015960
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Rhodanese domain-containing protein
Location	chr2: 13238863 .. 13240230 (-)
RNA-Seq Expression	CsaV3_2G015960
Synteny	CsaV3_2G015960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTTAATTAAACATTCAAGAATTTTAATCAATAATTACATTATGAATTCAGCATAACTTGAAATGATCAAAGTCAACCAAAAGCTTGCATTTTACAATCTTGATCATTTATAAAATCTTTTGGTTCTTAAGGAATGGATCCAATCTAACAAGGAAGAGGAAAAGCCGAAACAAAGAATCTCTTTGCTCTTTCAAAAGATGGAGAGGTTAATCTTATCAACCATGTTGCCATTTCCTTAACTCGTAGGAATGTAACCTCACATTTACTATGCAAAAAAAGAGTTTGAAATTAACTCATTTATTCACTCCCAATCTGCAGGACAGTCGATGTTCAAGTTGCCAAAGATCTCTTAGAAAAGGGTCGCCTCTGTTTGGATGTTAGGTCGGCTTATATATAAATATATATAATCAAAGGTAATGAAGCTAAATAACTGAAGAGATGGTTTTGGTTGCAGGACAGTTGAAGAGTATAACAAAGGCCATGTTGAGAATGCACTAAATGTTCCCTACGTGTTCTTCACCCCAGAAGGTAATAACCAGCTGTCCCTGTATGATTTTGTTCTAAAAGTAACTAAACTCTACAGTTTTAGGATGTTTTCACTGCTAAGCATTGACCTAGATGCATTTTCTTAGATCAACTCTCGTATGTTTGATCCTATAGAATCTGACAGTTTGCTAATAAACAGGTCAAGTAAAGAATCCCGACTTTCTAGCACAAGTTACATCCATATTAAAGAAGGAAGATCATATAGTGGTGGTAAGAAGAAAAACTATTCCTCGGTGTTGCTACTTTTATATCCCAATGCAGATTTAAAAGTAATATTGAAACAAATTGCAAAATATTTACCTATTTGTGCAGAATTGCAACAGAGGTGGTAGAGGCCTTCGTGCTTGCGTCGATCTTCTTAACGCGGTAAGATTTGAGATGCTAGAACTAATTTGCAAGGTTGACTAGACCTGCAAAAGAAAAGGATAAGTAATAATGAGATTTAGTGAGAAATTTCAGGGCTTCGAGCATGTGAATAACATGGGAGGAGGCTACTCTGCTTGGGTTGACAGTGGATTTGCTGGTGAGAAACCACCTGAAGAACTCAAAATAGCTTGCAAGTTCCGAGGTAGTTTATCATAAACTCCATATTTCAGGAAGTTAGAGTACTTCCAAGGAGTTTGTTGTAAGCTTGAACTAAGTGAACAGTGTTTGTAGTTTGTGTTGTTCTACAGAATAAATATTTTAGTTCCAGCATTTCTGAAGTTTCATTGTCTGTTGTACAAAAGAAAAAGTCTCGAAGTTCCAATTTCTTCTTCTTTCAGCTCCGAGTATAATATTTAAACTTTTATGATAGCGCTTGCAAATGAGCGCTTGAACTGC

mRNA sequence

ATGGAGAGGACAGTCGATGTTCAAGTTGCCAAAGATCTCTTAGAAAAGGGTCGCCTCTGTTTGGATGTTAGGACAGTTGAAGAGTATAACAAAGGCCATGTTGAGAATGCACTAAATGTTCCCTACGTGTTCTTCACCCCAGAAGGTCAAGTAAAGAATCCCGACTTTCTAGCACAAGTTACATCCATATTAAAGAAGGAAGATCATATAGTGGTGAATTGCAACAGAGGTGGTAGAGGCCTTCGTGCTTGCGTCGATCTTCTTAACGCGGGCTTCGAGCATGTGAATAACATGGGAGGAGGCTACTCTGCTTGGGTTGACAGTGGATTTGCTGGTGAGAAACCACCTGAAGAACTCAAAATAGCTTGCAAGTTCCGAGGTAGTTTATCATAA

Coding sequence (CDS)

ATGGAGAGGACAGTCGATGTTCAAGTTGCCAAAGATCTCTTAGAAAAGGGTCGCCTCTGTTTGGATGTTAGGACAGTTGAAGAGTATAACAAAGGCCATGTTGAGAATGCACTAAATGTTCCCTACGTGTTCTTCACCCCAGAAGGTCAAGTAAAGAATCCCGACTTTCTAGCACAAGTTACATCCATATTAAAGAAGGAAGATCATATAGTGGTGAATTGCAACAGAGGTGGTAGAGGCCTTCGTGCTTGCGTCGATCTTCTTAACGCGGGCTTCGAGCATGTGAATAACATGGGAGGAGGCTACTCTGCTTGGGTTGACAGTGGATTTGCTGGTGAGAAACCACCTGAAGAACTCAAAATAGCTTGCAAGTTCCGAGGTAGTTTATCATAA

Protein sequence

MERTVDVQVAKDLLEKGRLCLDVRTVEEYNKGHVENALNVPYVFFTPEGQVKNPDFLAQVTSILKKEDHIVVNCNRGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAGEKPPEELKIACKFRGSLS*

Homology

[Close]

BLAST of CsaV3_2G015960 vs. NCBI nr
Match: XP_004147071.1 (protein HIGH ARSENIC CONTENT 1, mitochondrial [Cucumis sativus] >KGN61922.1 hypothetical protein Csa_006618 [Cucumis sativus])

HSP 1 Score: 274.2 bits (700), Expect = 5.7e-70
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MERTVDVQVAKDLLEKGRLCLDVRTVEEYNKGHVENALNVPYVFFTPEGQVKNPDFLAQV 60
           MERTVDVQVAKDLLEKGRLCLDVRTVEEYNKGHVENALNVPYVFFTPEGQVKNPDFLAQV
Sbjct: 1   MERTVDVQVAKDLLEKGRLCLDVRTVEEYNKGHVENALNVPYVFFTPEGQVKNPDFLAQV 60

Query: 61  TSILKKEDHIVVNCNRGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAGEKPPEELK 120
           TSILKKEDHIVVNCNRGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAGEKPPEELK
Sbjct: 61  TSILKKEDHIVVNCNRGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAGEKPPEELK 120

Query: 121 IACKFRGSLS 131
           IACKFRGSLS
Sbjct: 121 IACKFRGSLS 130

[Close]

BLAST of CsaV3_2G015960 vs. NCBI nr
Match: XP_008457677.1 (PREDICTED: rhodanese-like domain-containing protein 19, mitochondrial isoform X2 [Cucumis melo] >TYJ99554.1 rhodanese-like domain-containing protein 19 [Cucumis melo var. makuwa])

HSP 1 Score: 252.7 bits (644), Expect = 1.8e-63
Identity = 120/127 (94.49%), Postives = 122/127 (96.06%), Query Frame = 0


Query: 1   MERTVDVQVAKDLLEKGRLCLDVRTVEEYNKGHVENALNVPYVFFTPEGQVKNPDFLAQV 60
           MERTVDVQVAKDLLEKG L LDVRTVEEYNKGHVENALNVPY+F TPEG+VKNPDFLAQV
Sbjct: 1   MERTVDVQVAKDLLEKGHLYLDVRTVEEYNKGHVENALNVPYMFLTPEGRVKNPDFLAQV 60

Query: 61  TSILKKEDHIVVNCNRGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAGEKPPEELK 120
           TSILKKEDHIVV CN GGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAGEKPPEELK
Sbjct: 61  TSILKKEDHIVVACNSGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAGEKPPEELK 120

Query: 121 IACKFRG 128
           IACKFRG
Sbjct: 121 IACKFRG 127

[Close]

BLAST of CsaV3_2G015960 vs. NCBI nr
Match: KAA0045726.1 (rhodanese-like domain-containing protein 19 [Cucumis melo var. makuwa])

HSP 1 Score: 248.1 bits (632), Expect = 4.3e-62
Identity = 120/128 (93.75%), Postives = 122/128 (95.31%), Query Frame = 0


Query: 1   MERTVDVQVAKDLLEKGRLCLDVRTVEEYNKGHVENALNVPYVFFTPEG-QVKNPDFLAQ 60
           MERTVDVQVAKDLLEKG L LDVRTVEEYNKGHVENALNVPY+F TPEG +VKNPDFLAQ
Sbjct: 1   MERTVDVQVAKDLLEKGHLYLDVRTVEEYNKGHVENALNVPYMFLTPEGSRVKNPDFLAQ 60

Query: 61  VTSILKKEDHIVVNCNRGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAGEKPPEEL 120
           VTSILKKEDHIVV CN GGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAGEKPPEEL
Sbjct: 61  VTSILKKEDHIVVACNSGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAGEKPPEEL 120

Query: 121 KIACKFRG 128
           KIACKFRG
Sbjct: 121 KIACKFRG 128

[Close]

BLAST of CsaV3_2G015960 vs. NCBI nr
Match: XP_008457676.1 (PREDICTED: rhodanese-like domain-containing protein 19, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 245.4 bits (625), Expect = 2.8e-61
Identity = 120/135 (88.89%), Postives = 122/135 (90.37%), Query Frame = 0


Query: 1   MERTVDVQVAKDLLEKGRLCLDVRTVEEYNKGHVENALNVPYVFFTPEG--------QVK 60
           MERTVDVQVAKDLLEKG L LDVRTVEEYNKGHVENALNVPY+F TPEG        +VK
Sbjct: 1   MERTVDVQVAKDLLEKGHLYLDVRTVEEYNKGHVENALNVPYMFLTPEGSNKWSSTCRVK 60

Query: 61  NPDFLAQVTSILKKEDHIVVNCNRGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAG 120
           NPDFLAQVTSILKKEDHIVV CN GGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAG
Sbjct: 61  NPDFLAQVTSILKKEDHIVVACNSGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAG 120

Query: 121 EKPPEELKIACKFRG 128
           EKPPEELKIACKFRG
Sbjct: 121 EKPPEELKIACKFRG 135

[Close]

BLAST of CsaV3_2G015960 vs. NCBI nr
Match: XP_038901855.1 (protein HIGH ARSENIC CONTENT 1, mitochondrial [Benincasa hispida])

HSP 1 Score: 238.8 bits (608), Expect = 2.6e-59
Identity = 111/124 (89.52%), Postives = 117/124 (94.35%), Query Frame = 0


Query: 4   TVDVQVAKDLLEKGRLCLDVRTVEEYNKGHVENALNVPYVFFTPEGQVKNPDFLAQVTSI 63
           TVDV+VAKDLL+KG L LDVRTVEEYNKGHVENALNVPY+FFTPEG+VKNPDFLAQV SI
Sbjct: 12  TVDVRVAKDLLQKGHLYLDVRTVEEYNKGHVENALNVPYMFFTPEGRVKNPDFLAQVMSI 71

Query: 64  LKKEDHIVVNCNRGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAGEKPPEELKIAC 123
           LKKEDH+VV CN GGRGLRACVDLLN GFEHVNNMGGGYSAWVDSGFAG+KPPEELK AC
Sbjct: 72  LKKEDHLVVACNSGGRGLRACVDLLNVGFEHVNNMGGGYSAWVDSGFAGDKPPEELKTAC 131

Query: 124 KFRG 128
           KFRG
Sbjct: 132 KFRG 135

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BLAST of CsaV3_2G015960 vs. ExPASy Swiss-Prot
Match: Q8RUD6 (Protein HIGH ARSENIC CONTENT 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HAC1 PE=1 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 5.3e-47
Identity = 85/123 (69.11%), Postives = 100/123 (81.30%), Query Frame = 0


Query: 4   TVDVQVAKDLLEKGRLCLDVRTVEEYNKGHVENALNVPYVFFTPEGQVKNPDFLAQVTSI 63
           TVDV  AK  L  G   LDVRT EE+ K HVE ALN+PY+F T EG+V NPDFL+QV S+
Sbjct: 43  TVDVYTAKGFLSTGHRYLDVRTNEEFAKSHVEEALNIPYMFKTDEGRVINPDFLSQVASV 102

Query: 64  LKKEDHIVVNCNRGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAGEKPPEELKIAC 123
            KK++H++V CN GGRG RACVDLLN G++HV NMGGGYSAWVD+GFAG+KPPE+LKIAC
Sbjct: 103 CKKDEHLIVACNAGGRGSRACVDLLNEGYDHVANMGGGYSAWVDAGFAGDKPPEDLKIAC 162

Query: 124 KFR 127
           KFR
Sbjct: 163 KFR 165

[Close]

BLAST of CsaV3_2G015960 vs. ExPASy Swiss-Prot
Match: F4IPI4 (Rhodanese-like domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=STR17 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 5.2e-26
Identity = 58/119 (48.74%), Postives = 78/119 (65.55%), Query Frame = 0


Query: 4   TVDVQVAKDLLEKGRLCLDVRTVEEYNKGHV--ENALNVPYVFFTPEGQVKNPDFLAQVT 63
           T+DV  A+ LL+ G   LDVRTVEE+ KGHV  EN  NVPY  +TP+GQ  NP+FL  V+
Sbjct: 34  TIDVNQAQKLLDSGYTFLDVRTVEEFKKGHVDSENVFNVPYWLYTPQGQEINPNFLKHVS 93

Query: 64  SILKKEDHIVVNCNRGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAGEKPPEELK 121
           S+  + DH+++ C  G R L A   L+++GF+ V NM GGY AWV+  F  +   +ELK
Sbjct: 94  SLCNQTDHLILGCKSGVRSLHATKFLVSSGFKTVRNMDGGYIAWVNKRFPVKVEHKELK 152

[Close]

BLAST of CsaV3_2G015960 vs. ExPASy Swiss-Prot
Match: Q9FKW8 (Thiosulfate sulfurtransferase 18 OS=Arabidopsis thaliana OX=3702 GN=STR18 PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.2e-25
Identity = 57/117 (48.72%), Postives = 77/117 (65.81%), Query Frame = 0


Query: 4   TVDVQVAKDLLEKGRLCLDVRTVEEYNKGHVENA--LNVPYVFFTPEGQVKNPDFLAQVT 63
           +VDV  AK LL+ G   LDVRT +E+ +GH E A  +N+PY+  TP+G+VKN +FL QV+
Sbjct: 16  SVDVSQAKTLLQSGHQYLDVRTQDEFRRGHCEAAKIVNIPYMLNTPQGRVKNQEFLEQVS 75

Query: 64  SILKKEDHIVVNCNRGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAGEKPPEE 119
           S+L   D I+V C  G R L+A  +L+ AG++ V N+GGGY AWVD  F      EE
Sbjct: 76  SLLNPADDILVGCQSGARSLKATTELVAAGYKKVRNVGGGYLAWVDHSFPINTEEEE 132

[Close]

BLAST of CsaV3_2G015960 vs. ExPASy Swiss-Prot
Match: Q39129 (Thiosulfate sulfurtransferase 16, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR16 PE=1 SV=2)

HSP 1 Score: 110.2 bits (274), Expect = 1.9e-23
Identity = 54/106 (50.94%), Postives = 70/106 (66.04%), Query Frame = 0


Query: 4   TVDVQVAKDLLEKGRLCLDVRTVEEYNKGHVENALNVPYVFFTPEGQVKNPDFLAQVTSI 63
           +V V VA DLL  G   LDVRT EE+++GH   A+NVPY+     G  KNPDFL QV+S 
Sbjct: 10  SVSVTVAHDLLLAGHRYLDVRTPEEFSQGHACGAINVPYMNRGASGMSKNPDFLEQVSSH 69

Query: 64  LKKEDHIVVNCNRGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSG 110
             + D+I+V C  GGR ++A  DLL+AGF  V ++ GGYSAW  +G
Sbjct: 70  FGQSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNG 115

[Close]

BLAST of CsaV3_2G015960 vs. ExPASy Swiss-Prot
Match: P27626 (Senescence-associated protein DIN1 OS=Raphanus sativus OX=3726 GN=DIN1 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.0e-21
Identity = 51/115 (44.35%), Postives = 71/115 (61.74%), Query Frame = 0


Query: 4   TVDVQVAKDLLEKGRLCLDVRTVEEYNKGHVENALNVPYVFFTPEGQVKNPDFLAQVTSI 63
           +V V+VA++L + G   LDVRT +E++ GH   A+NVPY++    G VKNP FL QV+S 
Sbjct: 73  SVPVRVARELAQAGYKHLDVRTPDEFSIGHPSRAINVPYMYRVGSGMVKNPSFLRQVSSH 132

Query: 64  LKKEDHIVVNCNRGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAGEKPPEE 119
            +K D I++ C  G R L A  +LL AGF  V ++ GGY  W ++    E P EE
Sbjct: 133 FRKHDEIIIGCESGERSLMASTELLTAGFTGVTDIAGGYVPWTEN----ELPVEE 183

[Close]

BLAST of CsaV3_2G015960 vs. ExPASy TrEMBL
Match: A0A0A0LMB7 (Rhodanese domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G270150 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 2.7e-70
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MERTVDVQVAKDLLEKGRLCLDVRTVEEYNKGHVENALNVPYVFFTPEGQVKNPDFLAQV 60
           MERTVDVQVAKDLLEKGRLCLDVRTVEEYNKGHVENALNVPYVFFTPEGQVKNPDFLAQV
Sbjct: 1   MERTVDVQVAKDLLEKGRLCLDVRTVEEYNKGHVENALNVPYVFFTPEGQVKNPDFLAQV 60

Query: 61  TSILKKEDHIVVNCNRGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAGEKPPEELK 120
           TSILKKEDHIVVNCNRGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAGEKPPEELK
Sbjct: 61  TSILKKEDHIVVNCNRGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAGEKPPEELK 120

Query: 121 IACKFRGSLS 131
           IACKFRGSLS
Sbjct: 121 IACKFRGSLS 130

[Close]

BLAST of CsaV3_2G015960 vs. ExPASy TrEMBL
Match: A0A5D3BKL1 (Rhodanese-like domain-containing protein 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001240 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 8.5e-64
Identity = 120/127 (94.49%), Postives = 122/127 (96.06%), Query Frame = 0


Query: 1   MERTVDVQVAKDLLEKGRLCLDVRTVEEYNKGHVENALNVPYVFFTPEGQVKNPDFLAQV 60
           MERTVDVQVAKDLLEKG L LDVRTVEEYNKGHVENALNVPY+F TPEG+VKNPDFLAQV
Sbjct: 1   MERTVDVQVAKDLLEKGHLYLDVRTVEEYNKGHVENALNVPYMFLTPEGRVKNPDFLAQV 60

Query: 61  TSILKKEDHIVVNCNRGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAGEKPPEELK 120
           TSILKKEDHIVV CN GGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAGEKPPEELK
Sbjct: 61  TSILKKEDHIVVACNSGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAGEKPPEELK 120

Query: 121 IACKFRG 128
           IACKFRG
Sbjct: 121 IACKFRG 127

[Close]

BLAST of CsaV3_2G015960 vs. ExPASy TrEMBL
Match: A0A1S3C5M3 (rhodanese-like domain-containing protein 19, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497320 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 8.5e-64
Identity = 120/127 (94.49%), Postives = 122/127 (96.06%), Query Frame = 0


Query: 1   MERTVDVQVAKDLLEKGRLCLDVRTVEEYNKGHVENALNVPYVFFTPEGQVKNPDFLAQV 60
           MERTVDVQVAKDLLEKG L LDVRTVEEYNKGHVENALNVPY+F TPEG+VKNPDFLAQV
Sbjct: 1   MERTVDVQVAKDLLEKGHLYLDVRTVEEYNKGHVENALNVPYMFLTPEGRVKNPDFLAQV 60

Query: 61  TSILKKEDHIVVNCNRGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAGEKPPEELK 120
           TSILKKEDHIVV CN GGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAGEKPPEELK
Sbjct: 61  TSILKKEDHIVVACNSGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAGEKPPEELK 120

Query: 121 IACKFRG 128
           IACKFRG
Sbjct: 121 IACKFRG 127

[Close]

BLAST of CsaV3_2G015960 vs. ExPASy TrEMBL
Match: A0A5A7TUB4 (Rhodanese-like domain-containing protein 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G002460 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.1e-62
Identity = 120/128 (93.75%), Postives = 122/128 (95.31%), Query Frame = 0


Query: 1   MERTVDVQVAKDLLEKGRLCLDVRTVEEYNKGHVENALNVPYVFFTPEG-QVKNPDFLAQ 60
           MERTVDVQVAKDLLEKG L LDVRTVEEYNKGHVENALNVPY+F TPEG +VKNPDFLAQ
Sbjct: 1   MERTVDVQVAKDLLEKGHLYLDVRTVEEYNKGHVENALNVPYMFLTPEGSRVKNPDFLAQ 60

Query: 61  VTSILKKEDHIVVNCNRGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAGEKPPEEL 120
           VTSILKKEDHIVV CN GGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAGEKPPEEL
Sbjct: 61  VTSILKKEDHIVVACNSGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAGEKPPEEL 120

Query: 121 KIACKFRG 128
           KIACKFRG
Sbjct: 121 KIACKFRG 128

[Close]

BLAST of CsaV3_2G015960 vs. ExPASy TrEMBL
Match: A0A1S3C7C4 (rhodanese-like domain-containing protein 19, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497320 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.4e-61
Identity = 120/135 (88.89%), Postives = 122/135 (90.37%), Query Frame = 0


Query: 1   MERTVDVQVAKDLLEKGRLCLDVRTVEEYNKGHVENALNVPYVFFTPEG--------QVK 60
           MERTVDVQVAKDLLEKG L LDVRTVEEYNKGHVENALNVPY+F TPEG        +VK
Sbjct: 1   MERTVDVQVAKDLLEKGHLYLDVRTVEEYNKGHVENALNVPYMFLTPEGSNKWSSTCRVK 60

Query: 61  NPDFLAQVTSILKKEDHIVVNCNRGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAG 120
           NPDFLAQVTSILKKEDHIVV CN GGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAG
Sbjct: 61  NPDFLAQVTSILKKEDHIVVACNSGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAG 120

Query: 121 EKPPEELKIACKFRG 128
           EKPPEELKIACKFRG
Sbjct: 121 EKPPEELKIACKFRG 135

[Close]

BLAST of CsaV3_2G015960 vs. TAIR 10
Match: AT2G21045.1 (Rhodanese/Cell cycle control phosphatase superfamily protein )

HSP 1 Score: 188.3 bits (477), Expect = 3.8e-48
Identity = 85/123 (69.11%), Postives = 100/123 (81.30%), Query Frame = 0


Query: 4   TVDVQVAKDLLEKGRLCLDVRTVEEYNKGHVENALNVPYVFFTPEGQVKNPDFLAQVTSI 63
           TVDV  AK  L  G   LDVRT EE+ K HVE ALN+PY+F T EG+V NPDFL+QV S+
Sbjct: 43  TVDVYTAKGFLSTGHRYLDVRTNEEFAKSHVEEALNIPYMFKTDEGRVINPDFLSQVASV 102

Query: 64  LKKEDHIVVNCNRGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAGEKPPEELKIAC 123
            KK++H++V CN GGRG RACVDLLN G++HV NMGGGYSAWVD+GFAG+KPPE+LKIAC
Sbjct: 103 CKKDEHLIVACNAGGRGSRACVDLLNEGYDHVANMGGGYSAWVDAGFAGDKPPEDLKIAC 162

Query: 124 KFR 127
           KFR
Sbjct: 163 KFR 165

[Close]

BLAST of CsaV3_2G015960 vs. TAIR 10
Match: AT2G17850.1 (Rhodanese/Cell cycle control phosphatase superfamily protein )

HSP 1 Score: 118.6 bits (296), Expect = 3.7e-27
Identity = 58/119 (48.74%), Postives = 78/119 (65.55%), Query Frame = 0


Query: 4   TVDVQVAKDLLEKGRLCLDVRTVEEYNKGHV--ENALNVPYVFFTPEGQVKNPDFLAQVT 63
           T+DV  A+ LL+ G   LDVRTVEE+ KGHV  EN  NVPY  +TP+GQ  NP+FL  V+
Sbjct: 34  TIDVNQAQKLLDSGYTFLDVRTVEEFKKGHVDSENVFNVPYWLYTPQGQEINPNFLKHVS 93

Query: 64  SILKKEDHIVVNCNRGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAGEKPPEELK 121
           S+  + DH+++ C  G R L A   L+++GF+ V NM GGY AWV+  F  +   +ELK
Sbjct: 94  SLCNQTDHLILGCKSGVRSLHATKFLVSSGFKTVRNMDGGYIAWVNKRFPVKVEHKELK 152

[Close]

BLAST of CsaV3_2G015960 vs. TAIR 10
Match: AT5G66170.3 (sulfurtransferase 18 )

HSP 1 Score: 117.5 bits (293), Expect = 8.2e-27
Identity = 57/117 (48.72%), Postives = 77/117 (65.81%), Query Frame = 0


Query: 4   TVDVQVAKDLLEKGRLCLDVRTVEEYNKGHVENA--LNVPYVFFTPEGQVKNPDFLAQVT 63
           +VDV  AK LL+ G   LDVRT +E+ +GH E A  +N+PY+  TP+G+VKN +FL QV+
Sbjct: 16  SVDVSQAKTLLQSGHQYLDVRTQDEFRRGHCEAAKIVNIPYMLNTPQGRVKNQEFLEQVS 75

Query: 64  SILKKEDHIVVNCNRGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSGFAGEKPPEE 119
           S+L   D I+V C  G R L+A  +L+ AG++ V N+GGGY AWVD  F      EE
Sbjct: 76  SLLNPADDILVGCQSGARSLKATTELVAAGYKKVRNVGGGYLAWVDHSFPINTEEEE 132

[Close]

BLAST of CsaV3_2G015960 vs. TAIR 10
Match: AT5G66170.2 (sulfurtransferase 18 )

HSP 1 Score: 112.5 bits (280), Expect = 2.6e-25
Identity = 57/119 (47.90%), Postives = 77/119 (64.71%), Query Frame = 0


Query: 4   TVDVQVAKDLLEKGRLCLDVRTVEEYNKGHVENA--LNVPYVFFTPEGQVKNPDFLAQVT 63
           +VDV  AK LL+ G   LDVRT +E+ +GH E A  +N+PY+  TP+G+VKN +FL QV+
Sbjct: 16  SVDVSQAKTLLQSGHQYLDVRTQDEFRRGHCEAAKIVNIPYMLNTPQGRVKNQEFLEQVS 75

Query: 64  SILKKEDHIVVNCNRGGRGLRACVDLLNA--GFEHVNNMGGGYSAWVDSGFAGEKPPEE 119
           S+L   D I+V C  G R L+A  +L+ A  G++ V N+GGGY AWVD  F      EE
Sbjct: 76  SLLNPADDILVGCQSGARSLKATTELVAAVSGYKKVRNVGGGYLAWVDHSFPINTEEEE 134

[Close]

BLAST of CsaV3_2G015960 vs. TAIR 10
Match: AT5G66040.1 (sulfurtransferase protein 16 )

HSP 1 Score: 110.2 bits (274), Expect = 1.3e-24
Identity = 54/106 (50.94%), Postives = 70/106 (66.04%), Query Frame = 0


Query: 4   TVDVQVAKDLLEKGRLCLDVRTVEEYNKGHVENALNVPYVFFTPEGQVKNPDFLAQVTSI 63
           +V V VA DLL  G   LDVRT EE+++GH   A+NVPY+     G  KNPDFL QV+S 
Sbjct: 10  SVSVTVAHDLLLAGHRYLDVRTPEEFSQGHACGAINVPYMNRGASGMSKNPDFLEQVSSH 69

Query: 64  LKKEDHIVVNCNRGGRGLRACVDLLNAGFEHVNNMGGGYSAWVDSG 110
             + D+I+V C  GGR ++A  DLL+AGF  V ++ GGYSAW  +G
Sbjct: 70  FGQSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNG 115

The following BLAST results are available for this feature:

BLAST of CsaV3_2G015960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147071.1	5.7e-70	100.00	protein HIGH ARSENIC CONTENT 1, mitochondrial [Cucumis sativus] >KGN61922.1 hypo...	[more]
XP_008457677.1	1.8e-63	94.49	PREDICTED: rhodanese-like domain-containing protein 19, mitochondrial isoform X2...	[more]
KAA0045726.1	4.3e-62	93.75	rhodanese-like domain-containing protein 19 [Cucumis melo var. makuwa]	[more]
XP_008457676.1	2.8e-61	88.89	PREDICTED: rhodanese-like domain-containing protein 19, mitochondrial isoform X1...	[more]
XP_038901855.1	2.6e-59	89.52	protein HIGH ARSENIC CONTENT 1, mitochondrial [Benincasa hispida]	[more]

BLAST of CsaV3_2G015960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RUD6	5.3e-47	69.11	Protein HIGH ARSENIC CONTENT 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN...	[more]
F4IPI4	5.2e-26	48.74	Rhodanese-like domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=S...	[more]
Q9FKW8	1.2e-25	48.72	Thiosulfate sulfurtransferase 18 OS=Arabidopsis thaliana OX=3702 GN=STR18 PE=1 S...	[more]
Q39129	1.9e-23	50.94	Thiosulfate sulfurtransferase 16, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
P27626	1.0e-21	44.35	Senescence-associated protein DIN1 OS=Raphanus sativus OX=3726 GN=DIN1 PE=2 SV=1	[more]

BLAST of CsaV3_2G015960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMB7	2.7e-70	100.00	Rhodanese domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G270150 P...	[more]
A0A5D3BKL1	8.5e-64	94.49	Rhodanese-like domain-containing protein 19 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3C5M3	8.5e-64	94.49	rhodanese-like domain-containing protein 19, mitochondrial isoform X2 OS=Cucumis...	[more]
A0A5A7TUB4	2.1e-62	93.75	Rhodanese-like domain-containing protein 19 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3C7C4	1.4e-61	88.89	rhodanese-like domain-containing protein 19, mitochondrial isoform X1 OS=Cucumis...	[more]

BLAST of CsaV3_2G015960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21045.1	3.8e-48	69.11	Rhodanese/Cell cycle control phosphatase superfamily protein	[more]
AT2G17850.1	3.7e-27	48.74	Rhodanese/Cell cycle control phosphatase superfamily protein	[more]
AT5G66170.3	8.2e-27	48.72	sulfurtransferase 18	[more]
AT5G66170.2	2.6e-25	47.90	sulfurtransferase 18	[more]
AT5G66040.1	1.3e-24	50.94	sulfurtransferase protein 16	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001763	Rhodanese-like domain	SMART	SM00450	rhod_4	coord: 5..111 e-value: 1.3E-11 score: 54.6
IPR001763	Rhodanese-like domain	PFAM	PF00581	Rhodanese	coord: 9..106 e-value: 1.8E-15 score: 57.4
IPR001763	Rhodanese-like domain	PROSITE	PS50206	RHODANESE_3	coord: 14..114 score: 17.559605
IPR036873	Rhodanese-like domain superfamily	GENE3D	3.40.250.10		coord: 1..111 e-value: 3.0E-32 score: 113.1
IPR036873	Rhodanese-like domain superfamily	SUPERFAMILY	52821	Rhodanese/Cell cycle control phosphatase	coord: 3..110
IPR044684	Rhodanese-like domain-containing protein STR17/STR18/HARC1-like	PANTHER	PTHR44542	THIOSULFATE SULFURTRANSFERASE 18	coord: 4..125
None	No IPR available	PANTHER	PTHR44542:SF14	PROTEIN HIGH ARSENIC CONTENT 1, MITOCHONDRIAL-RELATED	coord: 4..125
None	No IPR available	CDD	cd00158	RHOD	coord: 10..106 e-value: 1.35064E-21 score: 80.4214

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G015960.1	CsaV3_2G015960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003824	catalytic activity