CsaV3_2G014340 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_2G014340
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	cold-regulated 413 plasma membrane protein 2-like
Location	chr2: 11978795 .. 11981760 (+)
RNA-Seq Expression	CsaV3_2G014340
Synteny	CsaV3_2G014340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTTAATTTGATCCAATCCATTTCTTTATTTATATATTTAACAGAAAAATCCTATCTGTCTTTCAGTACGCTGCTTCGAATATTTCGCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTCGGAGATGGTGAAACCCAACCACTTGAAAATGGTGACGGATTCTGACGCTGCCGATCTCATTTCCTCTGATCTCCGGGAACTCGGTAACGCTGCTAGAAAGCTTGCTACACACGCTGTTAAGCTCGGTGCTTCGGGTTTTACTGCTTCTTTTCTCCAATGGATTGCTTCCTTTGCTGCTATGTATGTTCCCCCCCTCTCTCTCTCTTTTCTGTTTGTTTGATTTCTGAATTTTTTTTATGTTGTTTGTTTGTGGTTCTTCGCTGCTGATCGGTTATTTTAGTAGTTTTTTTTTTGCTGTGAGAAAGCTAATTGGTGATTTTGATTCGAGGAATTGAGTGTTTTTCAATTGATTTCTACTTGATTTTAGTAATTTGTTTGTTGATTTATGTGATGAAGTGGTTAAGGAGTATGACTATGATTTAGTTAGGGAAATGATTCGTGTTACATTAAGATATGTGCTTCTGAGTGTTCTTTTTCGTGTTCCTTATATTAATCTACTTTTAGGTTTTCATAGATCGTCTTAATTTCACTTCGATTCTTTTTAACTGCAGTTACTTGTTGATTTTGGATCGGACGAACTGGAAGACGAATATCCTTACTTCATTGTTGATTCCGTACATTTTCTTTAGTCTTCCCGGTGTGATCTTCGGTTTTTTCAGGTGATCATCTCCACTCCAAGCAATTGCCTTCAATTGAAGCTTCTGGATTTGCGTTTTTTTTTTTCTCTTTTTTTTTTTTTTGGCTAAATTGCTCTCTCTTTGCAGGGGAGAGTTTGGAAAATGGGTTGCCGTCATTGCTGTTGTGCTCCGTCTCTTCTTCCCGCGACGATTTCCAGGTACATTAGCCTCGACTTGATTAATGATTACACATTTATTGAATTCATTTTTGGTTAATAATAAGTACAGATTGTGCTAGCTGATAAGTATGTTGATATAGATTTAGAGCCATTAGTCGTTCTGATCTTCATTTAGAGATTTTTGGATGACTACCGCAATTACTAGTTTTGAACTTTTGCTTTCTTCCCTTTTAGATTAACTTTCTAATTTATGAACTGCTTGCTTTTGTTTTCTAATTTGTTCCTTTACTTTTTTAAAAGTATTTTTTGAAATCTTAACTAAATTTGAAAAGAAATTTTCAGTGGTTTTCTGAAAACTATGAGTTGCTTAATTTTATTTCAGAAACTGTTTGGTAGGATGATGTTTATTTTGTTTTGAAAAAGATGTTCTTCCTTCCTATCACACATGTTCTTGATTTTTAAACAATATGTAAACAGGGAAGCTGTTTTTGAACATGATTTTGAAAGACCCATCTCATCTATTTTCAAACTCTTTAAGCATTGATGTAAACAAACAATTCACAAACAAAAACCCATTATCAAACCTCTTTGACATCTTTGAGGTTATGAAGTTTGACAGGAAGAACTTTATAGTAATCAAAAGATCCAAAACTTTAGTTCAAATATAGGAAGTACCTTTAGGCATTTAGTATATCTTCAAAACTTATTTTCACATTTGTATTCCCAGCCCCAAGATAATTTGATTCACCAAAGTTAAAAGGAACAAATTACATGTCAAACCTCATTCATAATTATTCACACTCCAATCTTACAAGTAAAAGGGATATACGTTAGATTTCATCTTTAGGATATAGATTTGAGATTCGAGTTTTGTTTCAATTTGATAATTGACCCTAATTTTTTAATTTTCCATCTTGAATGTTAATCTTCATTAATTAATTTCAGAGAAATGTAATTAATTAACACTCATTATTAAGTAATTTAAAAATGTAAATATTAGGGACCAAATTGGAACTAAACTCAAAACTTAACTAAACTAAGTAATTATAAAACATTACGAAACTCAAAACTTAACTAAACTAAGTAATTATAAAACATTACGAAATTAGGGACGAAAATAGTTTTTTTACTTAAAAGTTCAAGTTAATAATAGTAATTTCACATCACATAATTAAGTTACAATCTATTATCCTGTGGAAGTATAATTATTGCATTCCATGCTCTGATTGTGTGGTAATACAGATTGGCTTGAATTGCCTGGAGCTTTGATACTTCTCATTGTGGTGGCTCCAAGTTTGTTTGCCAAGACCATAAGAAACGATCCCATCGGAGAAGCAATCTGTTTGATCATATCATGCTATTTACTGCAAGAACACATCAGAGCCTCTGGTGGATTCAGAAACTCATTCACAAAAGCGAATGGCATCTCGAACACCATCGGCATCATCCTTCTCTTCGTTTTCCCTGTCTGGGCACTGGTACTCCGTGTTCTTTGATTGGTTTTTTCTTTTATTTTCAAAATGCAATTATGCATTATTGATCTTTGCATTTGTTTGGGAATGTGGGCTTGTGAGAATTGTGTTTACCTTTTTTTCTCTTCAAATTGGGTGTTTGATTGTCTGAATGTAGGGGCTGTATCAGTGTAAAGTTAGATGAGGAGTTTCTCTCACAAAAGATTTGTGTATCATTTCTTTGAGGGACAAAATGTGAGATAATATAGATGTTATTGTGCTACAAACAGACTTTATTGCAAATTAATAATAATAAATAATAAATCTAAAATTTAATAATTATTATTATTAAAATATAATTTGTGGATTACACAGATAATGTAAACTAGAGCAATGGTTTTACGGTTGTAGAGATGTTGAATTTGAAATTTTGAAATTTTGATGTGTAAACATATATCTTATTAAAAAAGGGTATAATTAAAGTGCAGATTTGGCCCATCTATTTATTTTATATATAATCTCTCTATTTATCATATTGTAAAAGAATAATGATTAATTTTTTTATAATAAAAGCATTGATGAGTTATAGCCAA

mRNA sequence

ATGGTGAAACCCAACCACTTGAAAATGGTGACGGATTCTGACGCTGCCGATCTCATTTCCTCTGATCTCCGGGAACTCGGTAACGCTGCTAGAAAGCTTGCTACACACGCTGTTAAGCTCGGTGCTTCGGGTTTTACTGCTTCTTTTCTCCAATGGATTGCTTCCTTTGCTGCTATTTACTTGTTGATTTTGGATCGGACGAACTGGAAGACGAATATCCTTACTTCATTGTTGATTCCGTACATTTTCTTTAGTCTTCCCGGTGTGATCTTCGGTTTTTTCAGGGGAGAGTTTGGAAAATGGGTTGCCGTCATTGCTGTTGTGCTCCGTCTCTTCTTCCCGCGACGATTTCCAGATTGGCTTGAATTGCCTGGAGCTTTGATACTTCTCATTGTGGTGGCTCCAAGTTTGTTTGCCAAGACCATAAGAAACGATCCCATCGGAGAAGCAATCTGTTTGATCATATCATGCTATTTACTGCAAGAACACATCAGAGCCTCTGGTGGATTCAGAAACTCATTCACAAAAGCGAATGGCATCTCGAACACCATCGGCATCATCCTTCTCTTCGTTTTCCCTGTCTGGGCACTGGTACTCCGTGTTCTTTGA

Coding sequence (CDS)

ATGGTGAAACCCAACCACTTGAAAATGGTGACGGATTCTGACGCTGCCGATCTCATTTCCTCTGATCTCCGGGAACTCGGTAACGCTGCTAGAAAGCTTGCTACACACGCTGTTAAGCTCGGTGCTTCGGGTTTTACTGCTTCTTTTCTCCAATGGATTGCTTCCTTTGCTGCTATTTACTTGTTGATTTTGGATCGGACGAACTGGAAGACGAATATCCTTACTTCATTGTTGATTCCGTACATTTTCTTTAGTCTTCCCGGTGTGATCTTCGGTTTTTTCAGGGGAGAGTTTGGAAAATGGGTTGCCGTCATTGCTGTTGTGCTCCGTCTCTTCTTCCCGCGACGATTTCCAGATTGGCTTGAATTGCCTGGAGCTTTGATACTTCTCATTGTGGTGGCTCCAAGTTTGTTTGCCAAGACCATAAGAAACGATCCCATCGGAGAAGCAATCTGTTTGATCATATCATGCTATTTACTGCAAGAACACATCAGAGCCTCTGGTGGATTCAGAAACTCATTCACAAAAGCGAATGGCATCTCGAACACCATCGGCATCATCCTTCTCTTCGTTTTCCCTGTCTGGGCACTGGTACTCCGTGTTCTTTGA

Protein sequence

MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIYLLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGEFGKWVAVIAVVLRLFFPRRFPDWLELPGALILLIVVAPSLFAKTIRNDPIGEAICLIISCYLLQEHIRASGGFRNSFTKANGISNTIGIILLFVFPVWALVLRVL*

Homology

[Close]

BLAST of CsaV3_2G014340 vs. NCBI nr
Match: XP_004145347.1 (cold-regulated 413 plasma membrane protein 2 [Cucumis sativus] >KGN61758.1 hypothetical protein Csa_006288 [Cucumis sativus])

HSP 1 Score: 395.6 bits (1015), Expect = 2.6e-106
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60
           MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY
Sbjct: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60

Query: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGEFGKWVAVIAVVLRLFFPRRFPDW 120
           LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGEFGKWVAVIAVVLRLFFPRRFPDW
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGEFGKWVAVIAVVLRLFFPRRFPDW 120

Query: 121 LELPGALILLIVVAPSLFAKTIRNDPIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI 180
           LELPGALILLIVVAPSLFAKTIRNDPIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI
Sbjct: 121 LELPGALILLIVVAPSLFAKTIRNDPIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI 180

Query: 181 SNTIGIILLFVFPVWALVLRVL 203
           SNTIGIILLFVFPVWALVLRVL
Sbjct: 181 SNTIGIILLFVFPVWALVLRVL 202

[Close]

BLAST of CsaV3_2G014340 vs. NCBI nr
Match: XP_008459238.1 (PREDICTED: cold-regulated 413 plasma membrane protein 2-like [Cucumis melo])

HSP 1 Score: 387.1 bits (993), Expect = 9.3e-104
Identity = 198/202 (98.02%), Postives = 199/202 (98.51%), Query Frame = 0


Query: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60
           MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY
Sbjct: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60

Query: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGEFGKWVAVIAVVLRLFFPRRFPDW 120
           LLILDRTNWKTNILTSLLIPYIFFSLPG+IFGF RGEFGKWVAVIAVVLRLFFPRRFPDW
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEFGKWVAVIAVVLRLFFPRRFPDW 120

Query: 121 LELPGALILLIVVAPSLFAKTIRNDPIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI 180
           LELPGALILLIVVAPSLFA TIRND IGEAICLIISCYLLQEHIRASGGFRNSFTKANGI
Sbjct: 121 LELPGALILLIVVAPSLFASTIRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI 180

Query: 181 SNTIGIILLFVFPVWALVLRVL 203
           SNTIGIILLFVFPVWALVLRVL
Sbjct: 181 SNTIGIILLFVFPVWALVLRVL 202

[Close]

BLAST of CsaV3_2G014340 vs. NCBI nr
Match: KAA0045966.1 (cold-regulated 413 plasma membrane protein 2-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 386.7 bits (992), Expect = 1.2e-103
Identity = 197/202 (97.52%), Postives = 199/202 (98.51%), Query Frame = 0


Query: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60
           MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY
Sbjct: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60

Query: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGEFGKWVAVIAVVLRLFFPRRFPDW 120
           LLILDRTNWKTNILTSLLIPYIFFSLPG+IFGF RGEFGKWVAVIAVVLRLFFPRRFPDW
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEFGKWVAVIAVVLRLFFPRRFPDW 120

Query: 121 LELPGALILLIVVAPSLFAKTIRNDPIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI 180
           LELPGALILLIVVAPSLFA T+RND IGEAICLIISCYLLQEHIRASGGFRNSFTKANGI
Sbjct: 121 LELPGALILLIVVAPSLFASTVRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI 180

Query: 181 SNTIGIILLFVFPVWALVLRVL 203
           SNTIGIILLFVFPVWALVLRVL
Sbjct: 181 SNTIGIILLFVFPVWALVLRVL 202

[Close]

BLAST of CsaV3_2G014340 vs. NCBI nr
Match: TYK13619.1 (cold-regulated 413 plasma membrane protein 2-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 379.4 bits (973), Expect = 1.9e-101
Identity = 197/208 (94.71%), Postives = 199/208 (95.67%), Query Frame = 0


Query: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAI- 60
           MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAA+ 
Sbjct: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAMY 60

Query: 61  -----YLLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGEFGKWVAVIAVVLRLFFP 120
                YLLILDRTNWKTNILTSLLIPYIFFSLPG+IFGF RGEFGKWVAVIAVVLRLFFP
Sbjct: 61  XXXSRYLLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEFGKWVAVIAVVLRLFFP 120

Query: 121 RRFPDWLELPGALILLIVVAPSLFAKTIRNDPIGEAICLIISCYLLQEHIRASGGFRNSF 180
           RRFPDWLELPGALILLIVVAPSLFA TIRND IGEAICLIISCYLLQEHIRASGGFRNSF
Sbjct: 121 RRFPDWLELPGALILLIVVAPSLFASTIRNDAIGEAICLIISCYLLQEHIRASGGFRNSF 180

Query: 181 TKANGISNTIGIILLFVFPVWALVLRVL 203
           TKANGISNTIGIILLFVFPVWALVLRVL
Sbjct: 181 TKANGISNTIGIILLFVFPVWALVLRVL 208

[Close]

BLAST of CsaV3_2G014340 vs. NCBI nr
Match: XP_038902783.1 (cold-regulated 413 plasma membrane protein 2-like [Benincasa hispida])

HSP 1 Score: 376.3 bits (965), Expect = 1.6e-100
Identity = 193/202 (95.54%), Postives = 196/202 (97.03%), Query Frame = 0


Query: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60
           MVKPN+LKMVTDSDAADLISSDLRELGNAA+KLATHAVKL ASGF ASFLQWIASFAAIY
Sbjct: 1   MVKPNYLKMVTDSDAADLISSDLRELGNAAKKLATHAVKLCASGFAASFLQWIASFAAIY 60

Query: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGEFGKWVAVIAVVLRLFFPRRFPDW 120
           LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGF RGEFGKWVAVIAVVLRLFFPRRFPDW
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFLRGEFGKWVAVIAVVLRLFFPRRFPDW 120

Query: 121 LELPGALILLIVVAPSLFAKTIRNDPIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI 180
           LELPGALILLIVVAPSLFA TIR D IGEAICLIISCYLLQEHIRASGGFRNSFTKANGI
Sbjct: 121 LELPGALILLIVVAPSLFAHTIRGDAIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI 180

Query: 181 SNTIGIILLFVFPVWALVLRVL 203
           SNTIGI+LLFVFPVWALVLRVL
Sbjct: 181 SNTIGIVLLFVFPVWALVLRVL 202

[Close]

BLAST of CsaV3_2G014340 vs. ExPASy Swiss-Prot
Match: Q9SVL6 (Cold-regulated 413 plasma membrane protein 2 OS=Arabidopsis thaliana OX=3702 GN=COR413PM2 PE=2 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 1.1e-67
Identity = 131/203 (64.53%), Postives = 158/203 (77.83%), Query Frame = 0


Query: 1   MVKPNHLKMVTDS-DAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAI 60
           M + ++L M TD  D   L++SD+ EL  AA+KL +   KLG  GF  SFL+++ASFAAI
Sbjct: 1   MGRMDYLAMKTDDVDTVALVNSDMEELKVAAKKLFSDVSKLGGLGFGVSFLKFLASFAAI 60

Query: 61  YLLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGEFGKWVAVIAVVLRLFFPRRFPD 120
           YLLILDRTNWKT +LTSLLIPYIF SLP VIF F  G+ GKW+A +AVVLRLFFP+ FPD
Sbjct: 61  YLLILDRTNWKTKMLTSLLIPYIFLSLPSVIFNFLSGDVGKWIAFVAVVLRLFFPKHFPD 120

Query: 121 WLELPGALILLIVVAPSLFAKTIRNDPIGEAICLIISCYLLQEHIRASGGFRNSFTKANG 180
           WLE+PG+LILL+VV+P   A  IR   IG  I L I CYLLQEHIRASGGFRNSFT+  G
Sbjct: 121 WLEMPGSLILLLVVSPHFLAHHIRGTWIGTVISLFIGCYLLQEHIRASGGFRNSFTQPRG 180

Query: 181 ISNTIGIILLFVFPVWALVLRVL 203
           +SNT+GIILL V+PVWAL++RV+
Sbjct: 181 VSNTLGIILLLVYPVWALIVRVM 203

[Close]

BLAST of CsaV3_2G014340 vs. ExPASy Swiss-Prot
Match: Q9XIM7 (Cold-regulated 413 plasma membrane protein 1 OS=Arabidopsis thaliana OX=3702 GN=COR413PM1 PE=2 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 3.6e-66
Identity = 127/181 (70.17%), Postives = 147/181 (81.22%), Query Frame = 0


Query: 18  LISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIYLLILDRTNWKTNILTSL 77
           +I SD  EL  AA+ LATHA  L   GF  S L+W+AS AAIYLL+LDRTNWKTN+LTSL
Sbjct: 16  MIGSDFNELTIAAKNLATHAFTLTGLGFGTSVLEWVASIAAIYLLVLDRTNWKTNMLTSL 75

Query: 78  LIPYIFFSLPGVIFGFFRGEFGKWVAVIAVVLRLFFPRRFPDWLELPGALILLIVVAPSL 137
           LIPYIFFSLP +IFG FRGE GKW+A +AVV++LFFP+   ++LELP AL+LL VVAP+L
Sbjct: 76  LIPYIFFSLPSLIFGIFRGEIGKWIAFVAVVVQLFFPKHAREYLELPVALVLLAVVAPNL 135

Query: 138 FAKTIRNDPIGEAICLIISCYLLQEHIRASGGFRNSFTKANGISNTIGIILLFVFPVWAL 197
            A T R+  IG AICL I CYLLQEHIRASGGFRN+FTKANGISNT+GII L VFPVWAL
Sbjct: 136 IAGTFRDSWIGLAICLGIGCYLLQEHIRASGGFRNAFTKANGISNTVGIICLVVFPVWAL 195

Query: 198 V 199
           +
Sbjct: 196 I 196

[Close]

BLAST of CsaV3_2G014340 vs. ExPASy Swiss-Prot
Match: O23164 (Cold-regulated 413 plasma membrane protein 4 OS=Arabidopsis thaliana OX=3702 GN=At4g37220 PE=2 SV=2)

HSP 1 Score: 251.9 bits (642), Expect = 6.1e-66
Identity = 120/201 (59.70%), Postives = 154/201 (76.62%), Query Frame = 0


Query: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60
           M +   L M T+ +AA+LI+SD+ E   AA+KL      LG  GF  S LQW AS  AIY
Sbjct: 1   MGRGEFLAMKTEENAANLINSDMNEFVAAAKKLVKDVGMLGGVGFGTSVLQWAASIFAIY 60

Query: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGEFGKWVAVIAVVLRLFFPRRFPDW 120
           LLILDRTNWKT +LT+LL+PYIFF+LP VIF FF G+FGKW+A+IA+++RLFFP+ FP+W
Sbjct: 61  LLILDRTNWKTKMLTTLLVPYIFFTLPSVIFQFFSGDFGKWIALIAIIVRLFFPKEFPEW 120

Query: 121 LELPGALILLIVVAPSLFAKTIRNDPIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI 180
           LE+P ALIL++VV+PSL A T+R   +G  ICL+I+CYL  EHI+ASGGF+NSFT+ NGI
Sbjct: 121 LEIPVALILIVVVSPSLIAWTLRESWVGAVICLVIACYLFHEHIKASGGFKNSFTQKNGI 180

Query: 181 SNTIGIILLFVFPVWALVLRV 202
           SNTIGI+ L V+PVW +   +
Sbjct: 181 SNTIGIVALLVYPVWTIFFHI 201

[Close]

BLAST of CsaV3_2G014340 vs. ExPASy Swiss-Prot
Match: O64834 (Cold-regulated 413 plasma membrane protein 3 OS=Arabidopsis thaliana OX=3702 GN=At2g23680 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.8e-33
Identity = 73/150 (48.67%), Postives = 103/150 (68.67%), Query Frame = 0


Query: 49  FLQWIASFAAIYLLILDRTNWK--TNILTSLLIPYIFFSLPGVIFGFFRGEFGKWVAVIA 108
           FL+W+AS  A++L+ILD+T WK   NI+ SLL PY+F SLP VIF   R   GKW+A++ 
Sbjct: 30  FLRWLASIVAVFLMILDQTKWKYSNNIMASLLAPYLFSSLPIVIFQVLRNGVGKWIALLT 89

Query: 109 VVLRLFFPRRFPDWLELPGALILLIVVAPSLFAKTIRND--PIGEAICLIISCYLLQEHI 168
           V+LRLF P  F + LE+PGA ILLIVV PS      R+D    G  +CL+ S YL+ +H 
Sbjct: 90  VILRLFLPNHFHESLEIPGATILLIVVTPSDIGAIFRDDLRYTGGDVCLLTSFYLINKHT 149

Query: 169 RASGGFRNSFTKANGISNTIGIILLFVFPV 195
           +A GG +NSFT+ + ++ +I + +LFV+P+
Sbjct: 150 KACGGIKNSFTQKDKVTYSICLWILFVYPI 179

[Close]

BLAST of CsaV3_2G014340 vs. ExPASy Swiss-Prot
Match: Q94AL8 (Cold-regulated 413 inner membrane protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=COR413IM1 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 8.7e-12
Identity = 53/183 (28.96%), Postives = 92/183 (50.27%), Query Frame = 0


Query: 5   NHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIYLLIL 64
           N L++  D      +S+ + +     R+    +V   A+  +A+ LQWI++ + + L++ 
Sbjct: 45  NPLRLSGDRQRTATVSTRVEK-----RRKRGSSVVCYAAPISANSLQWISTISCLALMLA 104

Query: 65  DRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGEFGKWVAVIAVVLRLFFPRRFPDWLELP 124
                 T I  S+++P      P  I  + +GE+G W A +A++ RLFF   FP  LELP
Sbjct: 105 R----GTGIHKSVVVPLFALHAPSSIVAWIKGEYGVWAAFLALIARLFF--TFPGELELP 164

Query: 125 GALILLIVVAPSLFAKTIRNDPIGEAICLIISCYLLQEHIRASGGFRNSFTKANGISNTI 184
              +LL++VAP      IR    G  I + IS +L  +H   +G    ++ K + ++ T+
Sbjct: 165 FIALLLVIVAP-YQVMNIRGKQEGAIIAIAISGFLAFQHFSRAGSLEKAYEKGSVLA-TV 214

Query: 185 GII 188
            II
Sbjct: 225 AII 214

[Close]

BLAST of CsaV3_2G014340 vs. ExPASy TrEMBL
Match: A0A0A0LIW2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G238250 PE=3 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.3e-106
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60
           MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY
Sbjct: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60

Query: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGEFGKWVAVIAVVLRLFFPRRFPDW 120
           LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGEFGKWVAVIAVVLRLFFPRRFPDW
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGEFGKWVAVIAVVLRLFFPRRFPDW 120

Query: 121 LELPGALILLIVVAPSLFAKTIRNDPIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI 180
           LELPGALILLIVVAPSLFAKTIRNDPIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI
Sbjct: 121 LELPGALILLIVVAPSLFAKTIRNDPIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI 180

Query: 181 SNTIGIILLFVFPVWALVLRVL 203
           SNTIGIILLFVFPVWALVLRVL
Sbjct: 181 SNTIGIILLFVFPVWALVLRVL 202

[Close]

BLAST of CsaV3_2G014340 vs. ExPASy TrEMBL
Match: A0A1S3CAX8 (cold-regulated 413 plasma membrane protein 2-like OS=Cucumis melo OX=3656 GN=LOC103498423 PE=3 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 4.5e-104
Identity = 198/202 (98.02%), Postives = 199/202 (98.51%), Query Frame = 0


Query: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60
           MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY
Sbjct: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60

Query: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGEFGKWVAVIAVVLRLFFPRRFPDW 120
           LLILDRTNWKTNILTSLLIPYIFFSLPG+IFGF RGEFGKWVAVIAVVLRLFFPRRFPDW
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEFGKWVAVIAVVLRLFFPRRFPDW 120

Query: 121 LELPGALILLIVVAPSLFAKTIRNDPIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI 180
           LELPGALILLIVVAPSLFA TIRND IGEAICLIISCYLLQEHIRASGGFRNSFTKANGI
Sbjct: 121 LELPGALILLIVVAPSLFASTIRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI 180

Query: 181 SNTIGIILLFVFPVWALVLRVL 203
           SNTIGIILLFVFPVWALVLRVL
Sbjct: 181 SNTIGIILLFVFPVWALVLRVL 202

[Close]

BLAST of CsaV3_2G014340 vs. ExPASy TrEMBL
Match: A0A5A7TUZ7 (Cold-regulated 413 plasma membrane protein 2-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G005140 PE=3 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 5.9e-104
Identity = 197/202 (97.52%), Postives = 199/202 (98.51%), Query Frame = 0


Query: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60
           MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY
Sbjct: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60

Query: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGEFGKWVAVIAVVLRLFFPRRFPDW 120
           LLILDRTNWKTNILTSLLIPYIFFSLPG+IFGF RGEFGKWVAVIAVVLRLFFPRRFPDW
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEFGKWVAVIAVVLRLFFPRRFPDW 120

Query: 121 LELPGALILLIVVAPSLFAKTIRNDPIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI 180
           LELPGALILLIVVAPSLFA T+RND IGEAICLIISCYLLQEHIRASGGFRNSFTKANGI
Sbjct: 121 LELPGALILLIVVAPSLFASTVRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI 180

Query: 181 SNTIGIILLFVFPVWALVLRVL 203
           SNTIGIILLFVFPVWALVLRVL
Sbjct: 181 SNTIGIILLFVFPVWALVLRVL 202

[Close]

BLAST of CsaV3_2G014340 vs. ExPASy TrEMBL
Match: A0A5D3CTU9 (Cold-regulated 413 plasma membrane protein 2-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G001230 PE=3 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 9.4e-102
Identity = 197/208 (94.71%), Postives = 199/208 (95.67%), Query Frame = 0


Query: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAI- 60
           MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAA+ 
Sbjct: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAMY 60

Query: 61  -----YLLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGEFGKWVAVIAVVLRLFFP 120
                YLLILDRTNWKTNILTSLLIPYIFFSLPG+IFGF RGEFGKWVAVIAVVLRLFFP
Sbjct: 61  XXXSRYLLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEFGKWVAVIAVVLRLFFP 120

Query: 121 RRFPDWLELPGALILLIVVAPSLFAKTIRNDPIGEAICLIISCYLLQEHIRASGGFRNSF 180
           RRFPDWLELPGALILLIVVAPSLFA TIRND IGEAICLIISCYLLQEHIRASGGFRNSF
Sbjct: 121 RRFPDWLELPGALILLIVVAPSLFASTIRNDAIGEAICLIISCYLLQEHIRASGGFRNSF 180

Query: 181 TKANGISNTIGIILLFVFPVWALVLRVL 203
           TKANGISNTIGIILLFVFPVWALVLRVL
Sbjct: 181 TKANGISNTIGIILLFVFPVWALVLRVL 208

[Close]

BLAST of CsaV3_2G014340 vs. ExPASy TrEMBL
Match: A0A6J1FVU6 (cold-regulated 413 plasma membrane protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111448574 PE=3 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 4.8e-98
Identity = 186/202 (92.08%), Postives = 195/202 (96.53%), Query Frame = 0


Query: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60
           MVKP++LKMVTDSDAADLIS+DLRELGNAA+KLATHAV+LGASGF A+FLQW+ASFAAIY
Sbjct: 1   MVKPSYLKMVTDSDAADLISNDLRELGNAAKKLATHAVQLGASGFPAAFLQWLASFAAIY 60

Query: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGEFGKWVAVIAVVLRLFFPRRFPDW 120
           LLILDRTNWKTNILTSLLIPYIFFSLPGVIF F RGEFGKWVA IAVVLRLFFPRRFPDW
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGVIFFFLRGEFGKWVAAIAVVLRLFFPRRFPDW 120

Query: 121 LELPGALILLIVVAPSLFAKTIRNDPIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI 180
           LELPGALILLIVVAP LFA T+RND IGEAICLIISCYLLQEHIRASGGFRNSFTKANGI
Sbjct: 121 LELPGALILLIVVAPGLFASTMRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI 180

Query: 181 SNTIGIILLFVFPVWALVLRVL 203
           SNTIGIILLFVFPVWALV+RVL
Sbjct: 181 SNTIGIILLFVFPVWALVVRVL 202

[Close]

BLAST of CsaV3_2G014340 vs. TAIR 10
Match: AT3G50830.1 (cold-regulated 413-plasma membrane 2 )

HSP 1 Score: 257.7 bits (657), Expect = 7.9e-69
Identity = 131/203 (64.53%), Postives = 158/203 (77.83%), Query Frame = 0


Query: 1   MVKPNHLKMVTDS-DAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAI 60
           M + ++L M TD  D   L++SD+ EL  AA+KL +   KLG  GF  SFL+++ASFAAI
Sbjct: 1   MGRMDYLAMKTDDVDTVALVNSDMEELKVAAKKLFSDVSKLGGLGFGVSFLKFLASFAAI 60

Query: 61  YLLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGEFGKWVAVIAVVLRLFFPRRFPD 120
           YLLILDRTNWKT +LTSLLIPYIF SLP VIF F  G+ GKW+A +AVVLRLFFP+ FPD
Sbjct: 61  YLLILDRTNWKTKMLTSLLIPYIFLSLPSVIFNFLSGDVGKWIAFVAVVLRLFFPKHFPD 120

Query: 121 WLELPGALILLIVVAPSLFAKTIRNDPIGEAICLIISCYLLQEHIRASGGFRNSFTKANG 180
           WLE+PG+LILL+VV+P   A  IR   IG  I L I CYLLQEHIRASGGFRNSFT+  G
Sbjct: 121 WLEMPGSLILLLVVSPHFLAHHIRGTWIGTVISLFIGCYLLQEHIRASGGFRNSFTQPRG 180

Query: 181 ISNTIGIILLFVFPVWALVLRVL 203
           +SNT+GIILL V+PVWAL++RV+
Sbjct: 181 VSNTLGIILLLVYPVWALIVRVM 203

[Close]

BLAST of CsaV3_2G014340 vs. TAIR 10
Match: AT2G15970.1 (cold regulated 413 plasma membrane 1 )

HSP 1 Score: 252.7 bits (644), Expect = 2.5e-67
Identity = 127/181 (70.17%), Postives = 147/181 (81.22%), Query Frame = 0


Query: 18  LISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIYLLILDRTNWKTNILTSL 77
           +I SD  EL  AA+ LATHA  L   GF  S L+W+AS AAIYLL+LDRTNWKTN+LTSL
Sbjct: 16  MIGSDFNELTIAAKNLATHAFTLTGLGFGTSVLEWVASIAAIYLLVLDRTNWKTNMLTSL 75

Query: 78  LIPYIFFSLPGVIFGFFRGEFGKWVAVIAVVLRLFFPRRFPDWLELPGALILLIVVAPSL 137
           LIPYIFFSLP +IFG FRGE GKW+A +AVV++LFFP+   ++LELP AL+LL VVAP+L
Sbjct: 76  LIPYIFFSLPSLIFGIFRGEIGKWIAFVAVVVQLFFPKHAREYLELPVALVLLAVVAPNL 135

Query: 138 FAKTIRNDPIGEAICLIISCYLLQEHIRASGGFRNSFTKANGISNTIGIILLFVFPVWAL 197
            A T R+  IG AICL I CYLLQEHIRASGGFRN+FTKANGISNT+GII L VFPVWAL
Sbjct: 136 IAGTFRDSWIGLAICLGIGCYLLQEHIRASGGFRNAFTKANGISNTVGIICLVVFPVWAL 195

Query: 198 V 199
           +
Sbjct: 196 I 196

[Close]

BLAST of CsaV3_2G014340 vs. TAIR 10
Match: AT4G37220.1 (Cold acclimation protein WCOR413 family )

HSP 1 Score: 251.9 bits (642), Expect = 4.3e-67
Identity = 120/201 (59.70%), Postives = 154/201 (76.62%), Query Frame = 0


Query: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60
           M +   L M T+ +AA+LI+SD+ E   AA+KL      LG  GF  S LQW AS  AIY
Sbjct: 1   MGRGEFLAMKTEENAANLINSDMNEFVAAAKKLVKDVGMLGGVGFGTSVLQWAASIFAIY 60

Query: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGEFGKWVAVIAVVLRLFFPRRFPDW 120
           LLILDRTNWKT +LT+LL+PYIFF+LP VIF FF G+FGKW+A+IA+++RLFFP+ FP+W
Sbjct: 61  LLILDRTNWKTKMLTTLLVPYIFFTLPSVIFQFFSGDFGKWIALIAIIVRLFFPKEFPEW 120

Query: 121 LELPGALILLIVVAPSLFAKTIRNDPIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI 180
           LE+P ALIL++VV+PSL A T+R   +G  ICL+I+CYL  EHI+ASGGF+NSFT+ NGI
Sbjct: 121 LEIPVALILIVVVSPSLIAWTLRESWVGAVICLVIACYLFHEHIKASGGFKNSFTQKNGI 180

Query: 181 SNTIGIILLFVFPVWALVLRV 202
           SNTIGI+ L V+PVW +   +
Sbjct: 181 SNTIGIVALLVYPVWTIFFHI 201

[Close]

BLAST of CsaV3_2G014340 vs. TAIR 10
Match: AT2G15970.2 (cold regulated 413 plasma membrane 1 )

HSP 1 Score: 175.3 bits (443), Expect = 5.2e-44
Identity = 89/136 (65.44%), Postives = 106/136 (77.94%), Query Frame = 0


Query: 18  LISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIYLLILDRTNWKTNILTSL 77
           +I SD  EL  AA+ LATHA  L   GF  S L+W+AS AAIYLL+LDRTNWKTN+LTSL
Sbjct: 16  MIGSDFNELTIAAKNLATHAFTLTGLGFGTSVLEWVASIAAIYLLVLDRTNWKTNMLTSL 75

Query: 78  LIPYIFFSLPGVIFGFFRGEFGKWVAVIAVVLRLFFPRRFPDWLELPGALILLIVVAPSL 137
           LIPYIFFSLP +IFG FRGE GKW+A +AVV++LFFP+   ++LELP AL+LL VVAP+L
Sbjct: 76  LIPYIFFSLPSLIFGIFRGEIGKWIAFVAVVVQLFFPKHAREYLELPVALVLLAVVAPNL 135

Query: 138 FAKTIRNDPIGEAICL 154
            A T R+  IG AICL
Sbjct: 136 IAGTFRDSWIGLAICL 151

[Close]

BLAST of CsaV3_2G014340 vs. TAIR 10
Match: AT2G23680.1 (Cold acclimation protein WCOR413 family )

HSP 1 Score: 144.1 bits (362), Expect = 1.3e-34
Identity = 73/150 (48.67%), Postives = 103/150 (68.67%), Query Frame = 0


Query: 49  FLQWIASFAAIYLLILDRTNWK--TNILTSLLIPYIFFSLPGVIFGFFRGEFGKWVAVIA 108
           FL+W+AS  A++L+ILD+T WK   NI+ SLL PY+F SLP VIF   R   GKW+A++ 
Sbjct: 30  FLRWLASIVAVFLMILDQTKWKYSNNIMASLLAPYLFSSLPIVIFQVLRNGVGKWIALLT 89

Query: 109 VVLRLFFPRRFPDWLELPGALILLIVVAPSLFAKTIRND--PIGEAICLIISCYLLQEHI 168
           V+LRLF P  F + LE+PGA ILLIVV PS      R+D    G  +CL+ S YL+ +H 
Sbjct: 90  VILRLFLPNHFHESLEIPGATILLIVVTPSDIGAIFRDDLRYTGGDVCLLTSFYLINKHT 149

Query: 169 RASGGFRNSFTKANGISNTIGIILLFVFPV 195
           +A GG +NSFT+ + ++ +I + +LFV+P+
Sbjct: 150 KACGGIKNSFTQKDKVTYSICLWILFVYPI 179

The following BLAST results are available for this feature:

BLAST of CsaV3_2G014340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145347.1	2.6e-106	100.00	cold-regulated 413 plasma membrane protein 2 [Cucumis sativus] >KGN61758.1 hypot...	[more]
XP_008459238.1	9.3e-104	98.02	PREDICTED: cold-regulated 413 plasma membrane protein 2-like [Cucumis melo]	[more]
KAA0045966.1	1.2e-103	97.52	cold-regulated 413 plasma membrane protein 2-like protein [Cucumis melo var. mak...	[more]
TYK13619.1	1.9e-101	94.71	cold-regulated 413 plasma membrane protein 2-like protein [Cucumis melo var. mak...	[more]
XP_038902783.1	1.6e-100	95.54	cold-regulated 413 plasma membrane protein 2-like [Benincasa hispida]	[more]

BLAST of CsaV3_2G014340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SVL6	1.1e-67	64.53	Cold-regulated 413 plasma membrane protein 2 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9XIM7	3.6e-66	70.17	Cold-regulated 413 plasma membrane protein 1 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
O23164	6.1e-66	59.70	Cold-regulated 413 plasma membrane protein 4 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
O64834	1.8e-33	48.67	Cold-regulated 413 plasma membrane protein 3 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q94AL8	8.7e-12	28.96	Cold-regulated 413 inner membrane protein 1, chloroplastic OS=Arabidopsis thalia...	[more]

BLAST of CsaV3_2G014340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIW2	1.3e-106	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G238250 PE=3 SV=1	[more]
A0A1S3CAX8	4.5e-104	98.02	cold-regulated 413 plasma membrane protein 2-like OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A5A7TUZ7	5.9e-104	97.52	Cold-regulated 413 plasma membrane protein 2-like protein OS=Cucumis melo var. m...	[more]
A0A5D3CTU9	9.4e-102	94.71	Cold-regulated 413 plasma membrane protein 2-like protein OS=Cucumis melo var. m...	[more]
A0A6J1FVU6	4.8e-98	92.08	cold-regulated 413 plasma membrane protein 2 OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of CsaV3_2G014340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50830.1	7.9e-69	64.53	cold-regulated 413-plasma membrane 2	[more]
AT2G15970.1	2.5e-67	70.17	cold regulated 413 plasma membrane 1	[more]
AT4G37220.1	4.3e-67	59.70	Cold acclimation protein WCOR413 family	[more]
AT2G15970.2	5.2e-44	65.44	cold regulated 413 plasma membrane 1	[more]
AT2G23680.1	1.3e-34	48.67	Cold acclimation protein WCOR413 family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008892	Cold-regulated 413 protein	PFAM	PF05562	WCOR413	coord: 9..189 e-value: 2.7E-89 score: 298.0
IPR008892	Cold-regulated 413 protein	PANTHER	PTHR33596	COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2	coord: 1..201
None	No IPR available	PANTHER	PTHR33596:SF18	COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 1-RELATED	coord: 1..201

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G014340.1	CsaV3_2G014340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane