CsaV3_2G013420 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G013420
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionEpidermal patterning factor-like protein
Locationchr2: 11032234 .. 11033149 (+)
RNA-Seq ExpressionCsaV3_2G013420
SyntenyCsaV3_2G013420
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAATCTTTGAATCTTTTATTTCTTTAGACCATTTTGACTCAAAAATTAGAAATATGAAATAAAAATAAACTTTATATATATATATATATATATAGATTGAGATATGACAGCTCTCTGTTTTTTTTCTCGTTTTCTGTTTCGATTTTATGACCTTTCTCCACTTCACTTCCTCCTCCATTTCTGGCCGCCGATGGCCCTACTCCTCCTCCTCCACCACCGCCGCCGCACTCCTCTATCCCTCCTCCTCCTCCTCCTCCTCACTTCCTCCATTGCCGCCCGCCCCACTCCCATCGGTAAGTTTCAATTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTATTCTCTCTCAAACCACCCATCTCTTAATTCCTCTATTTATCAACCCATTTCTCGGTTTGTTTTAACAAAAACAGACCAGGAAGCAGAACCAAAGCTTCTTCCACCAGGAACAAAGGAGCCATTTTTGACACGGCGGAGACTCAGCGGACCAGGGTCGTCCCCGCCCACTTGTAGATCCAAGTGCGGTAGTTGCCGCCCGTGTACGGCTGTGCACGTCCCTATTCAACCGGGCCTTAGTTTGCCCTTGGAATATTACCCTGAAGCTTGGCGTTGCAAATGCGGCAACACCCTCTATATGCCATGAAATTTTAGCAAAACAAAATAAAATAACAATCCTTTTTTTTTTTCTTCTTCTTCTTCTTTGTCAAATATATTCTGCTGATCAATTGTTTTTGCCACTTGTAGTCACTTCAATGGGAGTTCTTTTTTTTTTCTTTTTTCTTTTTGAAAAAATGTTCATATGATATATAATGTCATCGAAACTTGAAATCCCCCATTGTTTTTTGTTTTGCTGCGTTGGGAAAGAAAGTTTAAGCACTTTGGAAATGCAATAGTTTTTATTTTATTTGGCC

mRNA sequence

ATGACAGCTCTCTGTTTTTTTTCTCGTTTTCTGTTTCGATTTTATGACCTTTCTCCACTTCACTTCCTCCTCCATTTCTGGCCGCCGATGGCCCTACTCCTCCTCCTCCACCACCGCCGCCGCACTCCTCTATCCCTCCTCCTCCTCCTCCTCCTCACTTCCTCCATTGCCGCCCGCCCCACTCCCATCGACCAGGAAGCAGAACCAAAGCTTCTTCCACCAGGAACAAAGGAGCCATTTTTGACACGGCGGAGACTCAGCGGACCAGGGTCGTCCCCGCCCACTTGTAGATCCAAGTGCGGTAGTTGCCGCCCGTGTACGGCTGTGCACGTCCCTATTCAACCGGGCCTTAGTTTGCCCTTGGAATATTACCCTGAAGCTTGGCGTTGCAAATGCGGCAACACCCTCTATATGCCATGA

Coding sequence (CDS)

ATGACAGCTCTCTGTTTTTTTTCTCGTTTTCTGTTTCGATTTTATGACCTTTCTCCACTTCACTTCCTCCTCCATTTCTGGCCGCCGATGGCCCTACTCCTCCTCCTCCACCACCGCCGCCGCACTCCTCTATCCCTCCTCCTCCTCCTCCTCCTCACTTCCTCCATTGCCGCCCGCCCCACTCCCATCGACCAGGAAGCAGAACCAAAGCTTCTTCCACCAGGAACAAAGGAGCCATTTTTGACACGGCGGAGACTCAGCGGACCAGGGTCGTCCCCGCCCACTTGTAGATCCAAGTGCGGTAGTTGCCGCCCGTGTACGGCTGTGCACGTCCCTATTCAACCGGGCCTTAGTTTGCCCTTGGAATATTACCCTGAAGCTTGGCGTTGCAAATGCGGCAACACCCTCTATATGCCATGA

Protein sequence

MTALCFFSRFLFRFYDLSPLHFLLHFWPPMALLLLLHHRRRTPLSLLLLLLLTSSIAARPTPIDQEAEPKLLPPGTKEPFLTRRRLSGPGSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP*
Homology
[Close]
BLAST of CsaV3_2G013420 vs. NCBI nr
Match: XP_004145393.2 (EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucumis sativus] >KAE8651835.1 hypothetical protein Csa_006221 [Cucumis sativus])

HSP 1 Score: 287.7 bits (735), Expect = 5.3e-74
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0 

Query: 1   MTALCFFSRFLFRFYDLSPLHFLLHFWPPMALLLLLHHRRRTPLSLLLLLLLTSSIAARP 60
           MTALCFFSRFLFRFYDLSPLHFLLHFWPPMALLLLLHHRRRTPLSLLLLLLLTSSIAARP
Sbjct: 1   MTALCFFSRFLFRFYDLSPLHFLLHFWPPMALLLLLHHRRRTPLSLLLLLLLTSSIAARP 60

Query: 61  TPIDQEAEPKLLPPGTKEPFLTRRRLSGPGSSPPTCRSKCGSCRPCTAVHVPIQPGLSLP 120
           TPIDQEAEPKLLPPGTKEPFLTRRRLSGPGSSPPTCRSKCGSCRPCTAVHVPIQPGLSLP
Sbjct: 61  TPIDQEAEPKLLPPGTKEPFLTRRRLSGPGSSPPTCRSKCGSCRPCTAVHVPIQPGLSLP 120

Query: 121 LEYYPEAWRCKCGNTLYMP 140
           LEYYPEAWRCKCGNTLYMP
Sbjct: 121 LEYYPEAWRCKCGNTLYMP 139

[Close]
BLAST of CsaV3_2G013420 vs. NCBI nr
Match: XP_008449315.1 (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 4 [Cucumis melo] >KAA0057450.1 EPIDERMAL PATTERNING FACTOR-like protein 4 [Cucumis melo var. makuwa] >TYK30149.1 EPIDERMAL PATTERNING FACTOR-like protein 4 [Cucumis melo var. makuwa])

HSP 1 Score: 191.0 bits (484), Expect = 6.7e-45
Identity = 94/107 (87.85%), Postives = 99/107 (92.52%), Query Frame = 0 

Query: 33  LLLLHHRRRTPLSLLLLLLLTSSIAARPTPIDQEAEPKLLPPGTKEPFLTRRRLSGPGSS 92
           +LLLHH RRT L+L LLLLLTSSIAARPTPID+EAE K LP GT+E  LTRRRL+GPGSS
Sbjct: 3   VLLLHHCRRTHLTLFLLLLLTSSIAARPTPIDEEAEAK-LPAGTRERVLTRRRLTGPGSS 62

Query: 93  PPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 140
           PPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP
Sbjct: 63  PPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 108

[Close]
BLAST of CsaV3_2G013420 vs. NCBI nr
Match: XP_023000566.1 (EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucurbita maxima])

HSP 1 Score: 156.0 bits (393), Expect = 2.4e-34
Identity = 82/117 (70.09%), Postives = 91/117 (77.78%), Query Frame = 0 

Query: 30  MALLLLLHH-----RRRTPLSLL--LLLLLTSSIAARPTPIDQEAEPKLLPPGTKEPFLT 89
           MA++LL HH     RRR P   L  ++LLL S+IAARPTPI +      LP G +E  +T
Sbjct: 1   MAVVLLHHHHNHHRRRRLPTLFLFAVVLLLASAIAARPTPIKETQ----LPTGGEERVVT 60

Query: 90  RRRLSGPGSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 140
           RRRLSGPGSSPPTCRSKCGSC PCTAVHVPI PGLSLPLEYYPEAWRCKCGN+LYMP
Sbjct: 61  RRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPLEYYPEAWRCKCGNSLYMP 113

[Close]
BLAST of CsaV3_2G013420 vs. NCBI nr
Match: XP_022930459.1 (EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucurbita moschata])

HSP 1 Score: 154.8 bits (390), Expect = 5.3e-34
Identity = 86/122 (70.49%), Postives = 94/122 (77.05%), Query Frame = 0 

Query: 30  MALLLLLHH-----RRRTP-------LSLLLLLLLTSSIAARPTPIDQEAEPKLLPPGTK 89
           MA++LL HH     RRR P       + LLLLLLL S+IAARPTPI    E +LL  G +
Sbjct: 1   MAVVLLHHHHNHHRRRRLPTLFLFAVVLLLLLLLLASAIAARPTPI---KETQLL-TGGE 60

Query: 90  EPFLTRRRLSGPGSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLY 140
           E  +TRRRLSGPGSSPPTCRSKCGSC PCTAVHVPI PGLSLPLEYYPEAWRCKCGN+LY
Sbjct: 61  ERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPLEYYPEAWRCKCGNSLY 118

[Close]
BLAST of CsaV3_2G013420 vs. NCBI nr
Match: XP_023513820.1 (EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 154.5 bits (389), Expect = 7.0e-34
Identity = 83/118 (70.34%), Postives = 91/118 (77.12%), Query Frame = 0 

Query: 30  MALLLL----LHHRRRTPLSLLL----LLLLTSSIAARPTPIDQEAEPKLLPPGTKEPFL 89
           MA++LL     HHRRR   +L L    LLLL S+IAARPTPI +      LP G +E  +
Sbjct: 1   MAVVLLHHHHNHHRRRCLPTLFLFAVVLLLLASAIAARPTPIKETQ----LPTGGEERVV 60

Query: 90  TRRRLSGPGSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 140
           TRRRLSGPGSSPPTCRSKCGSC PCTAVHVPI PGLSLPLEYYPEAWRCKCGN+LYMP
Sbjct: 61  TRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPLEYYPEAWRCKCGNSLYMP 114

[Close]
BLAST of CsaV3_2G013420 vs. ExPASy Swiss-Prot
Match: Q2V3I3 (EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EPFL4 PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 6.1e-25
Identity = 46/58 (79.31%), Postives = 51/58 (87.93%), Query Frame = 0 

Query: 82  TRRRLSGPGSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 140
           + +R  GPGSSPPTCRSKCG C+PC  VHVPIQPGLS+PLEYYPEAWRCKCGN L+MP
Sbjct: 52  SNKRFGGPGSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 109

[Close]
BLAST of CsaV3_2G013420 vs. ExPASy Swiss-Prot
Match: Q9LUH9 (EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EPFL5 PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 8.9e-24
Identity = 53/94 (56.38%), Postives = 64/94 (68.09%), Query Frame = 0 

Query: 49  LLLLTSSIAA---RPTPIDQEAEPKLLPPGTKEPFLTRRRLSGPGSSPPTCRSKCGSCRP 108
           LL  +SS AA   RP+    + + ++   G     + ++RL GPGS PP CR KCG C P
Sbjct: 14  LLFFSSSSAASLQRPSGGLGQGKKEIARSGLPGQIVDQKRLGGPGSVPPMCRLKCGKCEP 73

Query: 109 CTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 140
           C AVHVPIQPGL +PLEYYPEAWRCKCGN L+MP
Sbjct: 74  CKAVHVPIQPGLIMPLEYYPEAWRCKCGNKLFMP 107

[Close]
BLAST of CsaV3_2G013420 vs. ExPASy Swiss-Prot
Match: Q1PEY6 (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EPFL6 PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 3.9e-19
Identity = 40/57 (70.18%), Postives = 42/57 (73.68%), Query Frame = 0 

Query: 83  RRRLSGPGSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 140
           RR L G GSSPP C SKCG C PC  VHVP+ PG  +  EYYPEAWRCKCGN LYMP
Sbjct: 100 RRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 156

[Close]
BLAST of CsaV3_2G013420 vs. ExPASy Swiss-Prot
Match: Q7M1E7 (Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.6e-07
Identity = 21/49 (42.86%), Postives = 30/49 (61.22%), Query Frame = 0 

Query: 91  SSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 140
           SSPP C++KC  C+PC    + + P  + P +YYP+ W C C N +Y P
Sbjct: 468 SSPPNCKNKCKGCQPCKPKLIIVHP--NKPQDYYPQKWVCSCHNKIYNP 514

[Close]
BLAST of CsaV3_2G013420 vs. ExPASy Swiss-Prot
Match: Q9FY19 (Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.4e-07
Identity = 21/49 (42.86%), Postives = 30/49 (61.22%), Query Frame = 0 

Query: 91  SSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 140
           SSPP C++KC  C+PC    + + P  + P +YYP+ W C C N +Y P
Sbjct: 461 SSPPNCKNKCKGCQPCKPKLIIVHP--NQPEDYYPQRWVCSCHNKIYNP 507

[Close]
BLAST of CsaV3_2G013420 vs. ExPASy TrEMBL
Match: A0A0A0LKT0 (Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G222070 PE=3 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 3.1e-56
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 30  MALLLLLHHRRRTPLSLLLLLLLTSSIAARPTPIDQEAEPKLLPPGTKEPFLTRRRLSGP 89
           MALLLLLHHRRRTPLSLLLLLLLTSSIAARPTPIDQEAEPKLLPPGTKEPFLTRRRLSGP
Sbjct: 1   MALLLLLHHRRRTPLSLLLLLLLTSSIAARPTPIDQEAEPKLLPPGTKEPFLTRRRLSGP 60

Query: 90  GSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 140
           GSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP
Sbjct: 61  GSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 110

[Close]
BLAST of CsaV3_2G013420 vs. ExPASy TrEMBL
Match: A0A5A7UQS2 (Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G001330 PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 3.3e-45
Identity = 94/107 (87.85%), Postives = 99/107 (92.52%), Query Frame = 0 

Query: 33  LLLLHHRRRTPLSLLLLLLLTSSIAARPTPIDQEAEPKLLPPGTKEPFLTRRRLSGPGSS 92
           +LLLHH RRT L+L LLLLLTSSIAARPTPID+EAE K LP GT+E  LTRRRL+GPGSS
Sbjct: 3   VLLLHHCRRTHLTLFLLLLLTSSIAARPTPIDEEAEAK-LPAGTRERVLTRRRLTGPGSS 62

Query: 93  PPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 140
           PPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP
Sbjct: 63  PPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 108

[Close]
BLAST of CsaV3_2G013420 vs. ExPASy TrEMBL
Match: A0A1S3BMN7 (Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103491230 PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 3.3e-45
Identity = 94/107 (87.85%), Postives = 99/107 (92.52%), Query Frame = 0 

Query: 33  LLLLHHRRRTPLSLLLLLLLTSSIAARPTPIDQEAEPKLLPPGTKEPFLTRRRLSGPGSS 92
           +LLLHH RRT L+L LLLLLTSSIAARPTPID+EAE K LP GT+E  LTRRRL+GPGSS
Sbjct: 3   VLLLHHCRRTHLTLFLLLLLTSSIAARPTPIDEEAEAK-LPAGTRERVLTRRRLTGPGSS 62

Query: 93  PPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 140
           PPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP
Sbjct: 63  PPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 108

[Close]
BLAST of CsaV3_2G013420 vs. ExPASy TrEMBL
Match: A0A6J1KG67 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111494809 PE=3 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 1.2e-34
Identity = 82/117 (70.09%), Postives = 91/117 (77.78%), Query Frame = 0 

Query: 30  MALLLLLHH-----RRRTPLSLL--LLLLLTSSIAARPTPIDQEAEPKLLPPGTKEPFLT 89
           MA++LL HH     RRR P   L  ++LLL S+IAARPTPI +      LP G +E  +T
Sbjct: 1   MAVVLLHHHHNHHRRRRLPTLFLFAVVLLLASAIAARPTPIKETQ----LPTGGEERVVT 60

Query: 90  RRRLSGPGSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 140
           RRRLSGPGSSPPTCRSKCGSC PCTAVHVPI PGLSLPLEYYPEAWRCKCGN+LYMP
Sbjct: 61  RRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPLEYYPEAWRCKCGNSLYMP 113

[Close]
BLAST of CsaV3_2G013420 vs. ExPASy TrEMBL
Match: A0A6J1ERG1 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111436899 PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 2.6e-34
Identity = 86/122 (70.49%), Postives = 94/122 (77.05%), Query Frame = 0 

Query: 30  MALLLLLHH-----RRRTP-------LSLLLLLLLTSSIAARPTPIDQEAEPKLLPPGTK 89
           MA++LL HH     RRR P       + LLLLLLL S+IAARPTPI    E +LL  G +
Sbjct: 1   MAVVLLHHHHNHHRRRRLPTLFLFAVVLLLLLLLLASAIAARPTPI---KETQLL-TGGE 60

Query: 90  EPFLTRRRLSGPGSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLY 140
           E  +TRRRLSGPGSSPPTCRSKCGSC PCTAVHVPI PGLSLPLEYYPEAWRCKCGN+LY
Sbjct: 61  ERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPLEYYPEAWRCKCGNSLY 118

[Close]
BLAST of CsaV3_2G013420 vs. TAIR 10
Match: AT4G14723.1 (BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 115.2 bits (287), Expect = 4.4e-26
Identity = 46/58 (79.31%), Postives = 51/58 (87.93%), Query Frame = 0 

Query: 82  TRRRLSGPGSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 140
           + +R  GPGSSPPTCRSKCG C+PC  VHVPIQPGLS+PLEYYPEAWRCKCGN L+MP
Sbjct: 52  SNKRFGGPGSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 109

[Close]
BLAST of CsaV3_2G013420 vs. TAIR 10
Match: AT3G22820.1 (allergen-related )

HSP 1 Score: 111.3 bits (277), Expect = 6.3e-25
Identity = 53/94 (56.38%), Postives = 64/94 (68.09%), Query Frame = 0 

Query: 49  LLLLTSSIAA---RPTPIDQEAEPKLLPPGTKEPFLTRRRLSGPGSSPPTCRSKCGSCRP 108
           LL  +SS AA   RP+    + + ++   G     + ++RL GPGS PP CR KCG C P
Sbjct: 14  LLFFSSSSAASLQRPSGGLGQGKKEIARSGLPGQIVDQKRLGGPGSVPPMCRLKCGKCEP 73

Query: 109 CTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 140
           C AVHVPIQPGL +PLEYYPEAWRCKCGN L+MP
Sbjct: 74  CKAVHVPIQPGLIMPLEYYPEAWRCKCGNKLFMP 107

[Close]
BLAST of CsaV3_2G013420 vs. TAIR 10
Match: AT2G30370.1 (allergen-related )

HSP 1 Score: 95.9 bits (237), Expect = 2.7e-20
Identity = 40/57 (70.18%), Postives = 42/57 (73.68%), Query Frame = 0 

Query: 83  RRRLSGPGSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 140
           RR L G GSSPP C SKCG C PC  VHVP+ PG  +  EYYPEAWRCKCGN LYMP
Sbjct: 174 RRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 230

[Close]
BLAST of CsaV3_2G013420 vs. TAIR 10
Match: AT2G30370.2 (allergen-related )

HSP 1 Score: 95.9 bits (237), Expect = 2.7e-20
Identity = 40/57 (70.18%), Postives = 42/57 (73.68%), Query Frame = 0 

Query: 83  RRRLSGPGSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 140
           RR L G GSSPP C SKCG C PC  VHVP+ PG  +  EYYPEAWRCKCGN LYMP
Sbjct: 100 RRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 156

[Close]
BLAST of CsaV3_2G013420 vs. TAIR 10
Match: AT4G37810.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1); Has 149 Blast hits to 149 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.1 bits (113), Expect = 6.6e-06
Identity = 40/122 (32.79%), Postives = 52/122 (42.62%), Query Frame = 0 

Query: 46  LLLLLLLTS---SIAARPTPIDQEAEPKLLPPGTKEPFLTRRRLSGPGSSPPTC-RSKCG 105
           LL+LL+L S   S+ A   P     E      G ++  +  R L   GS PP C R +C 
Sbjct: 11  LLILLILNSTHFSLMANGRPEPDSVE--FTKSGDQDVKMMMRGLI--GSRPPRCERVRCR 70

Query: 106 SCRPCTAVHVPIQPGLSL--PL----------------------EYYPEAWRCKCGNTLY 140
           SC  C A+ VP  P   L  PL                       Y P +W+CKCGN++Y
Sbjct: 71  SCGHCEAIQVPTNPQTKLHSPLTTSSSSSSETIHLDYTRGDDSTNYKPMSWKCKCGNSIY 128

The following BLAST results are available for this feature:
BLAST of CsaV3_2G013420 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004145393.25.3e-74100.00EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucumis sativus] >KAE8651835.1 hypot... [more]
XP_008449315.16.7e-4587.85PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 4 [Cucumis melo] >KAA0057450... [more]
XP_023000566.12.4e-3470.09EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucurbita maxima][more]
XP_022930459.15.3e-3470.49EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucurbita moschata][more]
XP_023513820.17.0e-3470.34EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucurbita pepo subsp. pepo][more]
BLAST of CsaV3_2G013420 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q2V3I36.1e-2579.31EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
Q9LUH98.9e-2456.38EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
Q1PEY63.9e-1970.18EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
Q7M1E72.6e-0742.86Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1[more]
Q9FY193.4e-0742.86Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1[more]
BLAST of CsaV3_2G013420 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LKT03.1e-56100.00Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G222... [more]
A0A5A7UQS23.3e-4587.85Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A1S3BMN73.3e-4587.85Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103491230... [more]
A0A6J1KG671.2e-3470.09Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11149... [more]
A0A6J1ERG12.6e-3470.49Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
BLAST of CsaV3_2G013420 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G14723.14.4e-2679.31BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1);... [more]
AT3G22820.16.3e-2556.38allergen-related [more]
AT2G30370.12.7e-2070.18allergen-related [more]
AT2G30370.22.7e-2070.18allergen-related [more]
AT4G37810.16.6e-0632.79unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF17181EPFcoord: 89..139
e-value: 7.6E-20
score: 70.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..97
NoneNo IPR availablePANTHERPTHR33109:SF55EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4coord: 64..139
IPR039455EPIDERMAL PATTERNING FACTOR-like proteinPANTHERPTHR33109EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4coord: 64..139

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G013420.1CsaV3_2G013420.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010374 stomatal complex development