CsaV3_2G013220 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G013220
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr2: 10810068 .. 10810654 (+)
RNA-Seq ExpressionCsaV3_2G013220
SyntenyCsaV3_2G013220
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAATGAGATTTACCAATATCTCACCTCAAACACAAAACTCCAAATGCTTTCACAAAGAGGAAGAAGTATACAAGTCCAAATAAGAACAGAGCCAAAGAGAAAAGGTATGGCTAAGTTACTAAAACGCGAGGACTTAACAAAATTAATACTAATCAAAGAGTCAACATAAGAACGTGATATTACATGCAACACTTTTACTCACAGATAAGTCATAATCAACTTCATTTAGAAAAGTAATCGTCTCTACATAATTAAATTCAACTATAAGAGGCAGAATTAAAGTTTGAAACGCACGAGAAGAAGGTCTAGCACTATAGCTTTCATTTCCACCATCTTAATTTTGTAGACTTTGCTATGTTTATTCTTTTAAAGCGAACACCCACTAGAGAACTAGTGAAGTCACAATCCACGCCACTAGCAACAATATCCTCCAACCAGGAGGCATCCATTCAATTTTCAACCTCTCAAAGGGAGGTCCAAAAGACCGTGACTCGACAAGCTCTTAAACTTCAAGTACGACCTCTCGCAATTATCTTCAAATACCAAAGAGTTTTCAAGGAAGCAGTGGCGCAAGGCCGTTGA

mRNA sequence

ATGGCAAATGAGATTTACCAATATCTCACCTCAAACACAAAACTCCAAATGCTTTCACAAAGAGGAAGAAGTATACAAGTCCAAATAAGAACAGAGCCAAAGAGAAAAGACTTTGCTATGTTTATTCTTTTAAAGCGAACACCCACTAGAGAACTAGTGAAGTCACAATCCACGCCACTAGCAACAATATCCTCCAACCAGGAGGCATCCATTCAATTTTCAACCTCTCAAAGGGAGGTCCAAAAGACCGTGACTCGACAAGCTCTTAAACTTCAAGTACGACCTCTCGCAATTATCTTCAAATACCAAAGAGTTTTCAAGGAAGCAGTGGCGCAAGGCCGTTGA

Coding sequence (CDS)

ATGGCAAATGAGATTTACCAATATCTCACCTCAAACACAAAACTCCAAATGCTTTCACAAAGAGGAAGAAGTATACAAGTCCAAATAAGAACAGAGCCAAAGAGAAAAGACTTTGCTATGTTTATTCTTTTAAAGCGAACACCCACTAGAGAACTAGTGAAGTCACAATCCACGCCACTAGCAACAATATCCTCCAACCAGGAGGCATCCATTCAATTTTCAACCTCTCAAAGGGAGGTCCAAAAGACCGTGACTCGACAAGCTCTTAAACTTCAAGTACGACCTCTCGCAATTATCTTCAAATACCAAAGAGTTTTCAAGGAAGCAGTGGCGCAAGGCCGTTGA

Protein sequence

MANEIYQYLTSNTKLQMLSQRGRSIQVQIRTEPKRKDFAMFILLKRTPTRELVKSQSTPLATISSNQEASIQFSTSQREVQKTVTRQALKLQVRPLAIIFKYQRVFKEAVAQGR*
Homology
[Close]
BLAST of CsaV3_2G013220 vs. NCBI nr
Match: KGN61644.1 (hypothetical protein Csa_005921 [Cucumis sativus])

HSP 1 Score: 209.9 bits (533), Expect = 1.1e-50
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0 

Query: 1   MANEIYQYLTSNTKLQMLSQRGRSIQVQIRTEPKRKDFAMFILLKRTPTRELVKSQSTPL 60
           MANEIYQYLTSNTKLQMLSQRGRSIQVQIRTEPKRKDFAMFILLKRTPTRELVKSQSTPL
Sbjct: 1   MANEIYQYLTSNTKLQMLSQRGRSIQVQIRTEPKRKDFAMFILLKRTPTRELVKSQSTPL 60

Query: 61  ATISSNQEASIQFSTSQREVQKTVTRQALKLQVRPLAIIFKYQRVFKEAVAQGR 115
           ATISSNQEASIQFSTSQREVQKTVTRQALKLQVRPLAIIFKYQRVFKEAVAQGR
Sbjct: 61  ATISSNQEASIQFSTSQREVQKTVTRQALKLQVRPLAIIFKYQRVFKEAVAQGR 114

[Close]
BLAST of CsaV3_2G013220 vs. ExPASy TrEMBL
Match: A0A0A0LKR3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G200430 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 5.6e-51
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0 

Query: 1   MANEIYQYLTSNTKLQMLSQRGRSIQVQIRTEPKRKDFAMFILLKRTPTRELVKSQSTPL 60
           MANEIYQYLTSNTKLQMLSQRGRSIQVQIRTEPKRKDFAMFILLKRTPTRELVKSQSTPL
Sbjct: 1   MANEIYQYLTSNTKLQMLSQRGRSIQVQIRTEPKRKDFAMFILLKRTPTRELVKSQSTPL 60

Query: 61  ATISSNQEASIQFSTSQREVQKTVTRQALKLQVRPLAIIFKYQRVFKEAVAQGR 115
           ATISSNQEASIQFSTSQREVQKTVTRQALKLQVRPLAIIFKYQRVFKEAVAQGR
Sbjct: 61  ATISSNQEASIQFSTSQREVQKTVTRQALKLQVRPLAIIFKYQRVFKEAVAQGR 114

The following BLAST results are available for this feature:
BLAST of CsaV3_2G013220 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61644.11.1e-50100.00hypothetical protein Csa_005921 [Cucumis sativus][more]
BLAST of CsaV3_2G013220 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G013220 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LKR35.6e-51100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G200430 PE=4 SV=1[more]
BLAST of CsaV3_2G013220 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G013220.1CsaV3_2G013220.1mRNA