CsaV3_2G012360 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G012360
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionHir1
Locationchr2: 9933868 .. 9937820 (-)
RNA-Seq ExpressionCsaV3_2G012360
SyntenyCsaV3_2G012360
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CATTATTTAATACATAAAAAGAATAGGAAGGAACCAAAGATGAAGGGAAGAACAGAGAGGAGAAGCAGTTGAACTGAATTGAAGAATTTCTCTCGTTTTCACTACCAATTTCAGAGAGAGAGAGTTTTTATACGAATCTCTTCCCATTTTTCTCAATTACCCCCAAACTGATTTCCTTCATTTCTTCAAAATCATCACCTGCAGATTTCTCTGGTGTTGCTTCTAATTTCTGCGGCTTCGATGTAAACAGTTGAATGGTATTTGAGAAAGTAAAGGGAATACCCATTGATAGTACCTATAGAAAAAATGGAGGTCCAACAGTCATGGAGATTGAGGTTCTCGTTTAGGAATGCCACCATAGCTTTGTGCTTGTTGAACCTAGTGGCTGCTTTTCTTCTGCTTCAGGGTTTTTTATCTGTTGCTTCTTCACGGAACAGACCCTTGTCGACAAATCACAAACTGGGTTTGTCTTATCTCCTCCTCTTTACTTTTCCCAATTTCTTTTATAAATTCCATGTGCAGTAATCGAAATATTTGTTGGGGATTTGATGAAGTTAGGTGAGATTTTTCCTTGGCTTTGAGTTTTGATTCCATGAGATGATAACGTAGTTGTTTGAATTGGATATTGCTTGTCGGCGATTGATAAGTTGAGGATTAAGGTGTTATATATGTACCACCAGGAAACAAGAAATTGCATCTTTGAGGACTTGAAATGTAATCCTTCAATCCAGTTAGTCAGAATCTAAGGCAGTTGTAGACTTGAACAAGATAATGAAACTTGTCTTCTTTTAAGTTCCCAACATTTACATTCTTCTGTTGTGATCAAATTAGCACTGTGAAGTTTGATCTCCCCTAGTTGTCATTGTAAATCGGTAAAAATCTGTAGCTGAGATGGAATGGATATCTCATTATTGTAATTTTGGATATCCTGGAAGTTCAGACTCTCTCAAATATCATAAGCACCTGAAATTTTCTGCTAGCAACAGCAATTGTTGTTTTGATTATATTAGTCCAGAATTGGGTTATAAGATTTGCTGGCAACCTCTGTTATTTGGGAACAAGAAACAACTTTCCTTGATAAAATGAAAAGGAAGTGTTTATGGAACAAACTCCCAAGGGAATGAAAAGAAAGAAAAAAGAACTTTGGTGTCCAAGACTTGTTTGCATCCTCTGTTATTTGCATGTTTGGCTTTCCTGGAAATCCCTACTCTGTCAGGTGTCATTTGTACCTATAATTTTTTATTCTTAAATCTTGCATTTTTGGATTAAATTTTCTGGCAGAGATTTCGTGTAGGAGTTGAGTGAAGGTGATCTAATTTGGGAAAGCACAATTGTAACATCAAATTTTCAGTTTTTACTTCCGTTTCTTCTGTTATAAAATCGGCTGTTATTGGAATGGAACATTATATCTATGTGTTCTCCAAATTTCGAGAGTCCTATTATTGTATGACCTTTCATTACTTGAGTTGAGATAACGGGTGGAAACTTCAGAAGATTGTGGTAGCGCCTAATATCTCCCTTCACAAAAGAAGAGAGATTGAAAGTGGGGAACATAGTAAGTCCGATACTTGTAAGCTTCCAAACTGATTAAAACCTTACTCAAAGGTGAGAGGGAGACAATGATCTAAAACTTTGACCCCCCTTCAAAACAGAAGTTTGGAACTGAAATAGGATTACCTCTTTCATGCTTTAAGCAATCAATTGAGGTTCTTAAAAGGGACAAGTTTAGGCTCATGGTCGACCATTATCTTGCCATGTGCGAAAGCTTGCTTTCAAACTTTGCTTGTCATTGTTATGTTTTGACATTTCACATCAAACTTTATAACTTGGCATTATGTGATGTGATGCCATAGCGACATTGTTATCTGTATAATTGGATCAATTTTCATTCGTCACATATTCTTGGAGAATCTAAAAGCTGGCTGTAGTCAGTAAACTTGCTCAAATGTTGGGTAATTCTCTTAGCATATAATTTGGATCGATATGTTCTTTAGGAAGTGTTTCTATTAGAGCTTGCTAATACGTTGGATAAATAATGATCCTGCAACGTTCAGCCCATTTCGATAACACAGTTCTATGTGTTGCTTTGTCCTCTGTATATTTTGCCCCGATTGTTATTATCACTCTTGACCTGGTAATGCAAGACAACAATTTCATAAAAGAAAAATCATTTTAGTTTAAGCAATTCTGCAGCCCTGCCTGTTCCTTCCCAGTAGAGCTTGAAGGAAAGAACGAGCATAGTTTTTTGCCCTGATTGTTTGTTATCACCCTTGAGCTAGTAATGAATTTATATAGTGCTTCAGACATTATCTAGTTTAATATTTTGATATTTGAAACATTACTAAGCGTAAAGGGAATACTTTTTGTCTAATCTGACTTATTATCTGAACTTTGCTGTGTGAACAAATTGTGGTCTGAATTTGGTGTTCTGTTCTACTTTGATTATGCTCTCTAATTTTTGCTGTTAATTTTCCTGTTTCTGGTGGTTGTGTAACTCAATTAGATTGCTAAATTAGATAACGTCTGAAAATTGGCACTGCAGATCAACTCAAATATATCAAGGAAGCTCAAGAGATTCGACTTTCTATGCAACCTTTGGAGCTGATTAAAAGGGTAAGCACTTCATCAAGCATACCCTATAACCCATCAAAACATAAGACTTAGGTTTCATGAGTAAATTGTCAATTCAACAAGATAATTCCAAGAAAATGAAAACGAAGCCTCTCGAGTTCAAGACTTTTTATTCATTTATTTTATTTTATTTTATTTGAGTACAAACAACAGTGGGGAGAGAGATCGAACCTCTAATTTGTAGGAAAAAGTTCTATGCAAATGCCAATTACCATAGAGTTACTCATGGTTTGACCTCTTGAGTAAAAGGAAGGAGAAAGAAACAACAAACGACTGAAGACTAGACTATTTAGACTTAGTTACTTGAATTTACTCGAACTATGTTTATCCCTCCTTTTTAGTTTGCACCCTGGTGCCAATGCACATTTGGAATTTTCTTTTGCATTGGAGTTTAAATCTTCATAATTCTTCAGGTAAGGGAAATTCAGGAGGAAGCATATTATGAAACAGAAGCTGTACAAGACAAAGACTCCAAGCAGAATGCTGCAATGGATCTTTCTAAAAGATTGAAAGACTTCCGTTCTCTCAATGATGCTTCTAGTTTAAAAGGTACAATATTTCTGCTCTGAGACCTTCTCCCTCCCAGCCCATCCTCCTTTATGCCAGCCGTAAATCAAAACAACTGAATTCTTTTGGTTTGTCTTCAGGTTCCTAGACTTTGAGATTTTTGCCAACTTGATTCCGAAACTTGAATTTTCAAGTTAAATCTCTCTAATTTTTCGGATTTTAAAAATTTTGTGGATCTACTAGATACACATTTGAGATTTATATCAAGTACCAATTAGTTTTTAAAGAATTTTCAAAATTGGTACTAGACTCAAAAGTGAAAGGTTAAAACCTATAAACATTTCAACTTTGGTTATATTTTCCCTTAAGGCCAATTATTAGTTTGATGCTGATTCTAACAAAAAAAAAGCAAGTTGAATCGACTTGTTTAGCCGGAACCACCATCTTGTATCTCATCTAATATAAGTGTGAATGGTTTGTGACAAAGCTCTGGAGGAATGGCGCAAAAGGAAGATGGAAAGAGCAAGGCTGCGTGAAATAGAGAAAAACGGGACACTGAATTCTCCTTCTCAGCTTCGAAAACACAACTTCTAAATCTGTATGAACTTTCCTTGTGCCTTGTAAGACAAACTTGTCTATGTTGATTCTAAAGTCAAAAGCATCATACCTCTTCTTTTTATATCTGACTGCTCTTTTACAGAAACAGAGTTTGAGTGATTCAGAAGCTCAAAGATTATTCTATATATATATTAAACTAATACAACAAAATGTTTATGGACAACCAATGACAATATCTATAATGTTTTACCTGTCAC

mRNA sequence

ATGGAGGTCCAACAGTCATGGAGATTGAGGTTCTCGTTTAGGAATGCCACCATAGCTTTGTGCTTGTTGAACCTAGTGGCTGCTTTTCTTCTGCTTCAGGGTTTTTTATCTGTTGCTTCTTCACGGAACAGACCCTTGTCGACAAATCACAAACTGGATCAACTCAAATATATCAAGGAAGCTCAAGAGATTCGACTTTCTATGCAACCTTTGGAGCTGATTAAAAGGGTAAGGGAAATTCAGGAGGAAGCATATTATGAAACAGAAGCTGTACAAGACAAAGACTCCAAGCAGAATGCTGCAATGGATCTTTCTAAAAGATTGAAAGACTTCCGTTCTCTCAATGATGCTTCTAGTTTAAAAGCTCTGGAGGAATGGCGCAAAAGGAAGATGGAAAGAGCAAGGCTGCGTGAAATAGAGAAAAACGGGACACTGAATTCTCCTTCTCAGCTTCGAAAACACAACTTCTAA

Coding sequence (CDS)

ATGGAGGTCCAACAGTCATGGAGATTGAGGTTCTCGTTTAGGAATGCCACCATAGCTTTGTGCTTGTTGAACCTAGTGGCTGCTTTTCTTCTGCTTCAGGGTTTTTTATCTGTTGCTTCTTCACGGAACAGACCCTTGTCGACAAATCACAAACTGGATCAACTCAAATATATCAAGGAAGCTCAAGAGATTCGACTTTCTATGCAACCTTTGGAGCTGATTAAAAGGGTAAGGGAAATTCAGGAGGAAGCATATTATGAAACAGAAGCTGTACAAGACAAAGACTCCAAGCAGAATGCTGCAATGGATCTTTCTAAAAGATTGAAAGACTTCCGTTCTCTCAATGATGCTTCTAGTTTAAAAGCTCTGGAGGAATGGCGCAAAAGGAAGATGGAAAGAGCAAGGCTGCGTGAAATAGAGAAAAACGGGACACTGAATTCTCCTTCTCAGCTTCGAAAACACAACTTCTAA

Protein sequence

MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSVASSRNRPLSTNHKLDQLKYIKEAQEIRLSMQPLELIKRVREIQEEAYYETEAVQDKDSKQNAAMDLSKRLKDFRSLNDASSLKALEEWRKRKMERARLREIEKNGTLNSPSQLRKHNF*
Homology
[Close]
BLAST of CsaV3_2G012360 vs. NCBI nr
Match: XP_004147168.1 (uncharacterized protein LOC101209470 [Cucumis sativus] >KGN61556.1 hypothetical protein Csa_006544 [Cucumis sativus])

HSP 1 Score: 292.0 bits (746), Expect = 3.1e-75
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0 

Query: 1   MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSVASSRNRPLSTNHKLDQLKYIKE 60
           MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSVASSRNRPLSTNHKLDQLKYIKE
Sbjct: 1   MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSVASSRNRPLSTNHKLDQLKYIKE 60

Query: 61  AQEIRLSMQPLELIKRVREIQEEAYYETEAVQDKDSKQNAAMDLSKRLKDFRSLNDASSL 120
           AQEIRLSMQPLELIKRVREIQEEAYYETEAVQDKDSKQNAAMDLSKRLKDFRSLNDASSL
Sbjct: 61  AQEIRLSMQPLELIKRVREIQEEAYYETEAVQDKDSKQNAAMDLSKRLKDFRSLNDASSL 120

Query: 121 KALEEWRKRKMERARLREIEKNGTLNSPSQLRKHNF 157
           KALEEWRKRKMERARLREIEKNGTLNSPSQLRKHNF
Sbjct: 121 KALEEWRKRKMERARLREIEKNGTLNSPSQLRKHNF 156

[Close]
BLAST of CsaV3_2G012360 vs. NCBI nr
Match: TYK16764.1 (uncharacterized protein E5676_scaffold96G00180 [Cucumis melo var. makuwa])

HSP 1 Score: 278.9 bits (712), Expect = 2.7e-71
Identity = 149/155 (96.13%), Postives = 153/155 (98.71%), Query Frame = 0 

Query: 1   MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSVASSRNRPLSTNHKLDQLKYIKE 60
           MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLS ASSR+RPLSTN KLDQLKYI+E
Sbjct: 1   MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSRSRPLSTNQKLDQLKYIRE 60

Query: 61  AQEIRLSMQPLELIKRVREIQEEAYYETEAVQDKDSKQNAAMDLSKRLKDFRSLNDASSL 120
           AQEIRLSMQPLELIKRVREIQEEAYYETEAVQDKDSKQNAA+DLSKRLKDFRSLNDASSL
Sbjct: 61  AQEIRLSMQPLELIKRVREIQEEAYYETEAVQDKDSKQNAAIDLSKRLKDFRSLNDASSL 120

Query: 121 KALEEWRKRKMERARLREIEKNGTLNSPSQLRKHN 156
           KALEEWRKRKMERARLRE+EKNGTLNSPSQLRKHN
Sbjct: 121 KALEEWRKRKMERARLREMEKNGTLNSPSQLRKHN 155

[Close]
BLAST of CsaV3_2G012360 vs. NCBI nr
Match: XP_008460696.1 (PREDICTED: uncharacterized protein LOC103499464 [Cucumis melo] >KAA0031943.1 uncharacterized protein E6C27_scaffold134G00220 [Cucumis melo var. makuwa])

HSP 1 Score: 277.3 bits (708), Expect = 8.0e-71
Identity = 148/155 (95.48%), Postives = 152/155 (98.06%), Query Frame = 0 

Query: 1   MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSVASSRNRPLSTNHKLDQLKYIKE 60
           MEVQQSWRLRFSFRNATIALC LNLVAAFLLLQGFLS ASSR+RPLSTN KLDQLKYI+E
Sbjct: 1   MEVQQSWRLRFSFRNATIALCFLNLVAAFLLLQGFLSAASSRSRPLSTNQKLDQLKYIRE 60

Query: 61  AQEIRLSMQPLELIKRVREIQEEAYYETEAVQDKDSKQNAAMDLSKRLKDFRSLNDASSL 120
           AQEIRLSMQPLELIKRVREIQEEAYYETEAVQDKDSKQNAA+DLSKRLKDFRSLNDASSL
Sbjct: 61  AQEIRLSMQPLELIKRVREIQEEAYYETEAVQDKDSKQNAAIDLSKRLKDFRSLNDASSL 120

Query: 121 KALEEWRKRKMERARLREIEKNGTLNSPSQLRKHN 156
           KALEEWRKRKMERARLRE+EKNGTLNSPSQLRKHN
Sbjct: 121 KALEEWRKRKMERARLREMEKNGTLNSPSQLRKHN 155

[Close]
BLAST of CsaV3_2G012360 vs. NCBI nr
Match: XP_038874445.1 (uncharacterized protein LOC120067104 [Benincasa hispida] >XP_038874446.1 uncharacterized protein LOC120067104 [Benincasa hispida])

HSP 1 Score: 258.8 bits (660), Expect = 2.9e-65
Identity = 139/156 (89.10%), Postives = 147/156 (94.23%), Query Frame = 0 

Query: 1   MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSVASSRNRPLSTNHKLDQLKYIKE 60
           MEVQQSWRLRFSFRNATIALCLLNLVA FLLLQGFLS ASSRNRP STN  LDQLKYI+E
Sbjct: 1   MEVQQSWRLRFSFRNATIALCLLNLVAVFLLLQGFLSAASSRNRPSSTNLNLDQLKYIRE 60

Query: 61  AQEIRLSMQPLELIKRVREIQEEAYYETEAVQDKDSKQNAAMDLSKRLKDFRSLNDASSL 120
           ++EIRLSMQPLELIKRVREIQ+EA+YETE VQDKDSKQNAA+DLSKRLKDFRSLNDASSL
Sbjct: 61  SEEIRLSMQPLELIKRVREIQQEAHYETEDVQDKDSKQNAAIDLSKRLKDFRSLNDASSL 120

Query: 121 KALEEWRKRKMERARLREIEKNGTLNSPSQLRKHNF 157
           KALEEWRKRKMERARLRE+EKNGTL+S  Q RKHNF
Sbjct: 121 KALEEWRKRKMERARLREMEKNGTLSSSYQPRKHNF 156

[Close]
BLAST of CsaV3_2G012360 vs. NCBI nr
Match: XP_022138362.1 (uncharacterized protein LOC111009555 [Momordica charantia])

HSP 1 Score: 250.0 bits (637), Expect = 1.4e-62
Identity = 132/155 (85.16%), Postives = 144/155 (92.90%), Query Frame = 0 

Query: 1   MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSVASSRNRPLSTNHKLDQLKYIKE 60
           MEVQQ WRLRFSF+NATIA+CLLNLVAAF LLQGFLS ASSRNRP STN  L QLKYI+E
Sbjct: 1   MEVQQPWRLRFSFKNATIAMCLLNLVAAFFLLQGFLSAASSRNRPSSTNPSLGQLKYIRE 60

Query: 61  AQEIRLSMQPLELIKRVREIQEEAYYETEAVQDKDSKQNAAMDLSKRLKDFRSLNDASSL 120
           ++EIR +MQPLELIKRVREI+ EA+YETE VQ+KDSKQNAA+DLSKRLKDFRSLNDASSL
Sbjct: 61  SEEIRFAMQPLELIKRVREIEREAHYETEVVQEKDSKQNAAIDLSKRLKDFRSLNDASSL 120

Query: 121 KALEEWRKRKMERARLREIEKNGTLNSPSQLRKHN 156
           KALEEWRKRKMERARLRE+EKNGTL+SPSQ RKHN
Sbjct: 121 KALEEWRKRKMERARLREMEKNGTLSSPSQPRKHN 155

[Close]
BLAST of CsaV3_2G012360 vs. ExPASy TrEMBL
Match: A0A0A0LNL1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G169800 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.5e-75
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0 

Query: 1   MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSVASSRNRPLSTNHKLDQLKYIKE 60
           MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSVASSRNRPLSTNHKLDQLKYIKE
Sbjct: 1   MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSVASSRNRPLSTNHKLDQLKYIKE 60

Query: 61  AQEIRLSMQPLELIKRVREIQEEAYYETEAVQDKDSKQNAAMDLSKRLKDFRSLNDASSL 120
           AQEIRLSMQPLELIKRVREIQEEAYYETEAVQDKDSKQNAAMDLSKRLKDFRSLNDASSL
Sbjct: 61  AQEIRLSMQPLELIKRVREIQEEAYYETEAVQDKDSKQNAAMDLSKRLKDFRSLNDASSL 120

Query: 121 KALEEWRKRKMERARLREIEKNGTLNSPSQLRKHNF 157
           KALEEWRKRKMERARLREIEKNGTLNSPSQLRKHNF
Sbjct: 121 KALEEWRKRKMERARLREIEKNGTLNSPSQLRKHNF 156

[Close]
BLAST of CsaV3_2G012360 vs. ExPASy TrEMBL
Match: A0A5D3D0K8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G00180 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.3e-71
Identity = 149/155 (96.13%), Postives = 153/155 (98.71%), Query Frame = 0 

Query: 1   MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSVASSRNRPLSTNHKLDQLKYIKE 60
           MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLS ASSR+RPLSTN KLDQLKYI+E
Sbjct: 1   MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSAASSRSRPLSTNQKLDQLKYIRE 60

Query: 61  AQEIRLSMQPLELIKRVREIQEEAYYETEAVQDKDSKQNAAMDLSKRLKDFRSLNDASSL 120
           AQEIRLSMQPLELIKRVREIQEEAYYETEAVQDKDSKQNAA+DLSKRLKDFRSLNDASSL
Sbjct: 61  AQEIRLSMQPLELIKRVREIQEEAYYETEAVQDKDSKQNAAIDLSKRLKDFRSLNDASSL 120

Query: 121 KALEEWRKRKMERARLREIEKNGTLNSPSQLRKHN 156
           KALEEWRKRKMERARLRE+EKNGTLNSPSQLRKHN
Sbjct: 121 KALEEWRKRKMERARLREMEKNGTLNSPSQLRKHN 155

[Close]
BLAST of CsaV3_2G012360 vs. ExPASy TrEMBL
Match: A0A5A7SNT0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold134G00220 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 3.9e-71
Identity = 148/155 (95.48%), Postives = 152/155 (98.06%), Query Frame = 0 

Query: 1   MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSVASSRNRPLSTNHKLDQLKYIKE 60
           MEVQQSWRLRFSFRNATIALC LNLVAAFLLLQGFLS ASSR+RPLSTN KLDQLKYI+E
Sbjct: 1   MEVQQSWRLRFSFRNATIALCFLNLVAAFLLLQGFLSAASSRSRPLSTNQKLDQLKYIRE 60

Query: 61  AQEIRLSMQPLELIKRVREIQEEAYYETEAVQDKDSKQNAAMDLSKRLKDFRSLNDASSL 120
           AQEIRLSMQPLELIKRVREIQEEAYYETEAVQDKDSKQNAA+DLSKRLKDFRSLNDASSL
Sbjct: 61  AQEIRLSMQPLELIKRVREIQEEAYYETEAVQDKDSKQNAAIDLSKRLKDFRSLNDASSL 120

Query: 121 KALEEWRKRKMERARLREIEKNGTLNSPSQLRKHN 156
           KALEEWRKRKMERARLRE+EKNGTLNSPSQLRKHN
Sbjct: 121 KALEEWRKRKMERARLREMEKNGTLNSPSQLRKHN 155

[Close]
BLAST of CsaV3_2G012360 vs. ExPASy TrEMBL
Match: A0A1S3CD43 (uncharacterized protein LOC103499464 OS=Cucumis melo OX=3656 GN=LOC103499464 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 3.9e-71
Identity = 148/155 (95.48%), Postives = 152/155 (98.06%), Query Frame = 0 

Query: 1   MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSVASSRNRPLSTNHKLDQLKYIKE 60
           MEVQQSWRLRFSFRNATIALC LNLVAAFLLLQGFLS ASSR+RPLSTN KLDQLKYI+E
Sbjct: 1   MEVQQSWRLRFSFRNATIALCFLNLVAAFLLLQGFLSAASSRSRPLSTNQKLDQLKYIRE 60

Query: 61  AQEIRLSMQPLELIKRVREIQEEAYYETEAVQDKDSKQNAAMDLSKRLKDFRSLNDASSL 120
           AQEIRLSMQPLELIKRVREIQEEAYYETEAVQDKDSKQNAA+DLSKRLKDFRSLNDASSL
Sbjct: 61  AQEIRLSMQPLELIKRVREIQEEAYYETEAVQDKDSKQNAAIDLSKRLKDFRSLNDASSL 120

Query: 121 KALEEWRKRKMERARLREIEKNGTLNSPSQLRKHN 156
           KALEEWRKRKMERARLRE+EKNGTLNSPSQLRKHN
Sbjct: 121 KALEEWRKRKMERARLREMEKNGTLNSPSQLRKHN 155

[Close]
BLAST of CsaV3_2G012360 vs. ExPASy TrEMBL
Match: A0A6J1CAW5 (uncharacterized protein LOC111009555 OS=Momordica charantia OX=3673 GN=LOC111009555 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 6.6e-63
Identity = 132/155 (85.16%), Postives = 144/155 (92.90%), Query Frame = 0 

Query: 1   MEVQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSVASSRNRPLSTNHKLDQLKYIKE 60
           MEVQQ WRLRFSF+NATIA+CLLNLVAAF LLQGFLS ASSRNRP STN  L QLKYI+E
Sbjct: 1   MEVQQPWRLRFSFKNATIAMCLLNLVAAFFLLQGFLSAASSRNRPSSTNPSLGQLKYIRE 60

Query: 61  AQEIRLSMQPLELIKRVREIQEEAYYETEAVQDKDSKQNAAMDLSKRLKDFRSLNDASSL 120
           ++EIR +MQPLELIKRVREI+ EA+YETE VQ+KDSKQNAA+DLSKRLKDFRSLNDASSL
Sbjct: 61  SEEIRFAMQPLELIKRVREIEREAHYETEVVQEKDSKQNAAIDLSKRLKDFRSLNDASSL 120

Query: 121 KALEEWRKRKMERARLREIEKNGTLNSPSQLRKHN 156
           KALEEWRKRKMERARLRE+EKNGTL+SPSQ RKHN
Sbjct: 121 KALEEWRKRKMERARLREMEKNGTLSSPSQPRKHN 155

[Close]
BLAST of CsaV3_2G012360 vs. TAIR 10
Match: AT1G04555.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G33380.1); Has 84 Blast hits to 83 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 161.4 bits (407), Expect = 6.0e-40
Identity = 89/149 (59.73%), Postives = 115/149 (77.18%), Query Frame = 0 

Query: 3   VQQSWRLRFSFRNATIALCLLNLVAAFLLLQGFLSVASSRNRPLSTNHKLD-QLKYIKEA 62
           +   WR+RFSF+NATIAL ++N++    LLQGF + +SS +   S+   +  QL+YIKEA
Sbjct: 1   MDHQWRMRFSFKNATIALTVINVLIFLFLLQGFFTSSSSPSSSSSSRRLISAQLRYIKEA 60

Query: 63  QEIRLSMQPLELIKRVREIQEEAYYETEAVQDKDSKQNAAMDLSKRLKDFRSLNDASSLK 122
           +E+RL MQPLELI+RVREI++EA    E  Q KD KQ  A+DLSKRLKDFR+LNDASSLK
Sbjct: 61  EELRLKMQPLELIRRVREIEQEASAGQETEQQKDVKQTTAVDLSKRLKDFRALNDASSLK 120

Query: 123 ALEEWRKRKMERARLREIEKNGTLNSPSQ 151
           ALEEWRKRKMERAR R++EK G ++S ++
Sbjct: 121 ALEEWRKRKMERARQRDLEKTGGVSSSTK 149

The following BLAST results are available for this feature:
BLAST of CsaV3_2G012360 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004147168.13.1e-75100.00uncharacterized protein LOC101209470 [Cucumis sativus] >KGN61556.1 hypothetical ... [more]
TYK16764.12.7e-7196.13uncharacterized protein E5676_scaffold96G00180 [Cucumis melo var. makuwa][more]
XP_008460696.18.0e-7195.48PREDICTED: uncharacterized protein LOC103499464 [Cucumis melo] >KAA0031943.1 unc... [more]
XP_038874445.12.9e-6589.10uncharacterized protein LOC120067104 [Benincasa hispida] >XP_038874446.1 unchara... [more]
XP_022138362.11.4e-6285.16uncharacterized protein LOC111009555 [Momordica charantia][more]
BLAST of CsaV3_2G012360 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G012360 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LNL11.5e-75100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G169800 PE=4 SV=1[more]
A0A5D3D0K81.3e-7196.13Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7SNT03.9e-7195.48Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A1S3CD433.9e-7195.48uncharacterized protein LOC103499464 OS=Cucumis melo OX=3656 GN=LOC103499464 PE=... [more]
A0A6J1CAW56.6e-6385.16uncharacterized protein LOC111009555 OS=Momordica charantia OX=3673 GN=LOC111009... [more]
BLAST of CsaV3_2G012360 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G04555.16.0e-4059.73unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33344:SF7TRANSMEMBRANE PROTEINcoord: 6..147
NoneNo IPR availablePANTHERPTHR33344OS02G0761600 PROTEINcoord: 6..147

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G012360.1CsaV3_2G012360.1mRNA