CsaV3_2G012150 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G012150
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionA-kinase anchor protein 12
Locationchr2: 9637441 .. 9638680 (+)
RNA-Seq ExpressionCsaV3_2G012150
SyntenyCsaV3_2G012150
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTATTCCCAAAGGGTTTTCAAAAATATCACTCACTAAGTCTTTTGACTTATTATTTAAGTTTTTCCTTTCCACGTTGTAAGAAGCTAAGCGATCAGGTTGAAAGGTAAGTTAACGATGCTAAGCAATCGTGTTAAAAGGTAAGAGATCGTTAAAGGCAAAAGACTACGAAGGCTTTCAACATTTCTTTGTTAAGCTCTTGTTTTGGGAATTTGTATCTTGTTTTGTACTGTTTACTGAGGTATTTTATGTTGTGTGGTATTTATTTAAGTTTAAGTTAAGATGTGTCAAACGATTGATGCAGGGCGTGACAATTTGGTATCAGAGTATTACGTTCGTTGGGAGCTAAGTATATATTTAAGTTCTTTTTTAGAAAGGAATATAGAAAATATGCGACCAAGAAGAGGAAGGGAGCAGGAATAGATCAAGGTTGAAAATGGAACCTACCATAGATTCAGAGGCTCATGCATTAAATCCAAACGCAAGGAGAGAAGAAGAAGAAGCGTTGTATGATAGATTTGCGCAAAGATTAATTAACGCCTTGGCACAACAACTGAAGAAAAACTTTGGTATAGAAAGGGTTAAGGCATTAGGTGCTACGGAATTCAATGGGATAGAGAATCATGAGGAAGCAGAGAAATGGATCCGAACACTGGAGAAGTGTTTTCGAGTAATGCAATGCCCAAAGGAAAGAAGAGTTAATTTGGCGGTGTTCCTACTTCTGGAAAGGGCAGAAGATTGGTGGATACTTGAAGAAAATAGGAGAGGAATAGTTAGCTAAAAAGAGTTCAGAGAAATATTTAATAGTAAGTTTTTCTCTAAGACTTGCAGAGATGAAAGGCGAGATAAGTTCCTTCATTTGAAATAAGGGGAACTTTTGATTGCAGATTACGAAAAGAAGTTTACATAATTAATTAGGTATGTGATGGAAATACTCGATACTGAGAGAGAAGGATGCAAGTGATTTGAGAATAAATTAAGAGGGTTGGATTCTAATGTCCTCTGTTCACATGTTCTTATACTCCACCTTGATGACTTTAGAGATGGGCTCAAATCCTTCATCTGCAACTTCTTAAGCATCAAAATATGAAATCGGTGACTTTTAATTTTTTGTATATTTATTTTCCCAAAACATTTACCGCGGATTCTTCATTGACTTAATTTTTTTTAAGATCACCATTGTTGTTAGCAAATAAATTGGTTATATTTCATGTATGCAAATTAGGGTTGATGAGTTTAAAA

mRNA sequence

ATGGAACCTACCATAGATTCAGAGGCTCATGCATTAAATCCAAACGCAAGGAGAGAAGAAGAAGAAGCGTTGTATGATAGATTTGCGCAAAGATTAATTAACGCCTTGGCACAACAACTGAAGAAAAACTTTGGTATAGAAAGGGTTAAGGCATTAGGTGCTACGGAATTCAATGGGATAGAGAATCATGAGGAAGCAGAGAAATGGATCCGAACACTGGAGAAGTGTTTTCGAGTAATGCAATGCCCAAAGGAAAGAAGAGTTAATTTGGCGGTGTTCCTACTTCTGGAAAGGGCAGAAGATTGGTGGATACTTGAAGAAAATAGGAGAGGAATAGTTAGCTAA

Coding sequence (CDS)

ATGGAACCTACCATAGATTCAGAGGCTCATGCATTAAATCCAAACGCAAGGAGAGAAGAAGAAGAAGCGTTGTATGATAGATTTGCGCAAAGATTAATTAACGCCTTGGCACAACAACTGAAGAAAAACTTTGGTATAGAAAGGGTTAAGGCATTAGGTGCTACGGAATTCAATGGGATAGAGAATCATGAGGAAGCAGAGAAATGGATCCGAACACTGGAGAAGTGTTTTCGAGTAATGCAATGCCCAAAGGAAAGAAGAGTTAATTTGGCGGTGTTCCTACTTCTGGAAAGGGCAGAAGATTGGTGGATACTTGAAGAAAATAGGAGAGGAATAGTTAGCTAA

Protein sequence

MEPTIDSEAHALNPNARREEEEALYDRFAQRLINALAQQLKKNFGIERVKALGATEFNGIENHEEAEKWIRTLEKCFRVMQCPKERRVNLAVFLLLERAEDWWILEENRRGIVS*
Homology
[Close]
BLAST of CsaV3_2G012150 vs. NCBI nr
Match: KGN61535.1 (hypothetical protein Csa_006696 [Cucumis sativus])

HSP 1 Score: 232.3 bits (591), Expect = 2.2e-57
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0 

Query: 1   MEPTIDSEAHALNPNARREEEEALYDRFAQRLINALAQQLKKNFGIERVKALGATEFNGI 60
           MEPTIDSEAHALNPNARREEEEALYDRFAQRLINALAQQLKKNFGIERVKALGATEFNGI
Sbjct: 1   MEPTIDSEAHALNPNARREEEEALYDRFAQRLINALAQQLKKNFGIERVKALGATEFNGI 60

Query: 61  ENHEEAEKWIRTLEKCFRVMQCPKERRVNLAVFLLLERAEDWWILEENRRGIVS 115
           ENHEEAEKWIRTLEKCFRVMQCPKERRVNLAVFLLLERAEDWWILEENRRGIVS
Sbjct: 61  ENHEEAEKWIRTLEKCFRVMQCPKERRVNLAVFLLLERAEDWWILEENRRGIVS 114

[Close]
BLAST of CsaV3_2G012150 vs. NCBI nr
Match: KAA0066608.1 (A-kinase anchor protein 12 [Cucumis melo var. makuwa] >TYK14208.1 A-kinase anchor protein 12 [Cucumis melo var. makuwa])

HSP 1 Score: 125.9 bits (315), Expect = 2.2e-25
Identity = 61/101 (60.40%), Postives = 77/101 (76.24%), Query Frame = 0 

Query: 2   EPTIDSEAHALNPNARREEEEALYDRFAQRLINALAQQLKKNFGIERVKALGATEFNGIE 61
           EPTID E H +N + RRE+EE +YDR AQ +I+ + QQL+K FGIER++ALG TEF G  
Sbjct: 15  EPTIDLEVHLVNQDVRREQEETVYDRVAQWVIDVMTQQLEKKFGIERLEALGTTEFTGTT 74

Query: 62  NHEEAEKWIRTLEKCFRVMQCPKERRVNLAVFLLLERAEDW 103
              EA+K I+TLEKCFRV QC +ER+V+LA+FLL E  EDW
Sbjct: 75  EPREADKRIKTLEKCFRVTQCSQERKVDLAMFLLQEYKEDW 115

[Close]
BLAST of CsaV3_2G012150 vs. NCBI nr
Match: KAA0037861.1 (hypothetical protein E6C27_scaffold36G00200 [Cucumis melo var. makuwa] >TYK09821.1 hypothetical protein E5676_scaffold127G001250 [Cucumis melo var. makuwa])

HSP 1 Score: 110.5 bits (275), Expect = 9.5e-21
Identity = 53/76 (69.74%), Postives = 65/76 (85.53%), Query Frame = 0 

Query: 2  EPTIDSEAHALNPNARREEEEALYDRFAQRLINALAQQLKKNFGIERVKALGATEFNGIE 61
          +PT+D EAH+LNPNARR+++EALYDR AQRLI+ L QQ +K F IE++KALGAT+FNG  
Sbjct: 15 KPTMDLEAHSLNPNARRDQKEALYDRVAQRLIDVLTQQPEKKFQIEKLKALGATKFNGTT 74

Query: 62 NHEEAEKWIRTLEKCF 78
          N +EAEKW RTLEKCF
Sbjct: 75 NPDEAEKWSRTLEKCF 90

[Close]
BLAST of CsaV3_2G012150 vs. NCBI nr
Match: XP_038896366.1 (uncharacterized protein LOC120084630 [Benincasa hispida])

HSP 1 Score: 105.5 bits (262), Expect = 3.1e-19
Identity = 53/109 (48.62%), Postives = 75/109 (68.81%), Query Frame = 0 

Query: 6   DSEAHALNPNARREEEEALYDRFAQRL---INALAQQLKKNFGIERVKALGATEFNGIEN 65
           +SE+ + +P  +  EEE + ++F QRL   +  +   LKK +GIER+KALGAT F G ++
Sbjct: 16  ESESASSHPKEKSREEEQM-NKFTQRLQASLENIQPDLKKKYGIERLKALGATNFEGTKD 75

Query: 66  HEEAEKWIRTLEKCFRVMQCPKERRVNLAVFLLLERAEDWWILEENRRG 112
              AE W+  +EK F VM+CPK R+V+LA FLL ++AEDWW L +NRRG
Sbjct: 76  PANAEAWMNQIEKYFEVMRCPKNRKVSLATFLLQKQAEDWWKLLKNRRG 123

[Close]
BLAST of CsaV3_2G012150 vs. NCBI nr
Match: KAA0035225.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK21839.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 105.5 bits (262), Expect = 3.1e-19
Identity = 55/116 (47.41%), Postives = 74/116 (63.79%), Query Frame = 0 

Query: 6   DSEAHALNPNARREEEEALYDRFAQRLINAL---AQQLKKNFGIERVKALGATEFNGIEN 65
           +S+A +  P+     EE L DR AQRLI+ +       +K +GIER+KALGAT F G  N
Sbjct: 46  ESDAESSRPHVEGNMEEQLLDRLAQRLISGIRSAQSDPEKKYGIERLKALGATTFVGTTN 105

Query: 66  HEEAEKWIRTLEKCFRVMQCPKERRVNLAVFLLLE----RAEDWWILEENRRGIVS 115
             +AE W+  +EKCFRV +CP++R+V LA FLL      + EDWW +EE+RR I S
Sbjct: 106 PADAEAWLTLIEKCFRVTRCPEDRKVELASFLLQNGGGAKGEDWWRMEESRRRITS 161

[Close]
BLAST of CsaV3_2G012150 vs. ExPASy TrEMBL
Match: A0A0A0LI31 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G163160 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.0e-57
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0 

Query: 1   MEPTIDSEAHALNPNARREEEEALYDRFAQRLINALAQQLKKNFGIERVKALGATEFNGI 60
           MEPTIDSEAHALNPNARREEEEALYDRFAQRLINALAQQLKKNFGIERVKALGATEFNGI
Sbjct: 1   MEPTIDSEAHALNPNARREEEEALYDRFAQRLINALAQQLKKNFGIERVKALGATEFNGI 60

Query: 61  ENHEEAEKWIRTLEKCFRVMQCPKERRVNLAVFLLLERAEDWWILEENRRGIVS 115
           ENHEEAEKWIRTLEKCFRVMQCPKERRVNLAVFLLLERAEDWWILEENRRGIVS
Sbjct: 61  ENHEEAEKWIRTLEKCFRVMQCPKERRVNLAVFLLLERAEDWWILEENRRGIVS 114

[Close]
BLAST of CsaV3_2G012150 vs. ExPASy TrEMBL
Match: A0A5D3CSN0 (A-kinase anchor protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5G00330 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.1e-25
Identity = 61/101 (60.40%), Postives = 77/101 (76.24%), Query Frame = 0 

Query: 2   EPTIDSEAHALNPNARREEEEALYDRFAQRLINALAQQLKKNFGIERVKALGATEFNGIE 61
           EPTID E H +N + RRE+EE +YDR AQ +I+ + QQL+K FGIER++ALG TEF G  
Sbjct: 15  EPTIDLEVHLVNQDVRREQEETVYDRVAQWVIDVMTQQLEKKFGIERLEALGTTEFTGTT 74

Query: 62  NHEEAEKWIRTLEKCFRVMQCPKERRVNLAVFLLLERAEDW 103
              EA+K I+TLEKCFRV QC +ER+V+LA+FLL E  EDW
Sbjct: 75  EPREADKRIKTLEKCFRVTQCSQERKVDLAMFLLQEYKEDW 115

[Close]
BLAST of CsaV3_2G012150 vs. ExPASy TrEMBL
Match: A0A5D3CDA4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold127G001250 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 4.6e-21
Identity = 53/76 (69.74%), Postives = 65/76 (85.53%), Query Frame = 0 

Query: 2  EPTIDSEAHALNPNARREEEEALYDRFAQRLINALAQQLKKNFGIERVKALGATEFNGIE 61
          +PT+D EAH+LNPNARR+++EALYDR AQRLI+ L QQ +K F IE++KALGAT+FNG  
Sbjct: 15 KPTMDLEAHSLNPNARRDQKEALYDRVAQRLIDVLTQQPEKKFQIEKLKALGATKFNGTT 74

Query: 62 NHEEAEKWIRTLEKCF 78
          N +EAEKW RTLEKCF
Sbjct: 75 NPDEAEKWSRTLEKCF 90

[Close]
BLAST of CsaV3_2G012150 vs. ExPASy TrEMBL
Match: A0A5D3DES5 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold991G00660 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.5e-19
Identity = 55/116 (47.41%), Postives = 74/116 (63.79%), Query Frame = 0 

Query: 6   DSEAHALNPNARREEEEALYDRFAQRLINAL---AQQLKKNFGIERVKALGATEFNGIEN 65
           +S+A +  P+     EE L DR AQRLI+ +       +K +GIER+KALGAT F G  N
Sbjct: 46  ESDAESSRPHVEGNMEEQLLDRLAQRLISGIRSAQSDPEKKYGIERLKALGATTFVGTTN 105

Query: 66  HEEAEKWIRTLEKCFRVMQCPKERRVNLAVFLLLE----RAEDWWILEENRRGIVS 115
             +AE W+  +EKCFRV +CP++R+V LA FLL      + EDWW +EE+RR I S
Sbjct: 106 PADAEAWLTLIEKCFRVTRCPEDRKVELASFLLQNGGGAKGEDWWRMEESRRRITS 161

[Close]
BLAST of CsaV3_2G012150 vs. ExPASy TrEMBL
Match: A0A5A7SJ99 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold305G00100 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 3.3e-19
Identity = 55/108 (50.93%), Postives = 73/108 (67.59%), Query Frame = 0 

Query: 6   DSEAHALNPNARREEEEALYDRFAQRLINA--LAQ-QLKKNFGIERVKALGATEFNGIEN 65
           +S+A +  P+     EE L DR AQRLI    LAQ   +K +GIER+KALGAT F G  N
Sbjct: 27  ESDAESSRPHVEGNVEEQLLDRLAQRLILGIRLAQSDSEKKYGIERLKALGATTFVGTTN 86

Query: 66  HEEAEKWIRTLEKCFRVMQCPKERRVNLAVFLLLERAEDWWILEENRR 111
             +AE+W+  +EKCF+V +C ++R+V LA FLL   AEDWW +EE+RR
Sbjct: 87  PVDAEEWLTLIEKCFKVTRCSEDRKVELAAFLLQNGAEDWWHMEESRR 134

The following BLAST results are available for this feature:
BLAST of CsaV3_2G012150 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61535.12.2e-57100.00hypothetical protein Csa_006696 [Cucumis sativus][more]
KAA0066608.12.2e-2560.40A-kinase anchor protein 12 [Cucumis melo var. makuwa] >TYK14208.1 A-kinase ancho... [more]
KAA0037861.19.5e-2169.74hypothetical protein E6C27_scaffold36G00200 [Cucumis melo var. makuwa] >TYK09821... [more]
XP_038896366.13.1e-1948.62uncharacterized protein LOC120084630 [Benincasa hispida][more]
KAA0035225.13.1e-1947.41DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK21839.1 D... [more]
BLAST of CsaV3_2G012150 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G012150 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LI311.0e-57100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G163160 PE=4 SV=1[more]
A0A5D3CSN01.1e-2560.40A-kinase anchor protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... [more]
A0A5D3CDA44.6e-2169.74Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3DES51.5e-1947.41DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A5A7SJ993.3e-1950.93DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G... [more]
BLAST of CsaV3_2G012150 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G012150.1CsaV3_2G012150.1mRNA