CsaV3_2G011960 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G011960
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr2: 9339022 .. 9339207 (-)
RNA-Seq ExpressionCsaV3_2G011960
SyntenyCsaV3_2G011960
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGGTGAACAATGTTCTATAAGAAGGAAACTTAGAAGCAAATTTATGCATTGGCCGAGAGCTCCATTTCTTTGCAAGGAGAAATTTTGTGGGTATGTGCATCTTGCTGGAAGAAAACAATTTGTCAGTCATAGTGTTTTTTCAAAACTTTCATGGTCATCTTTCAAACGTGAACTTGGTAAT

mRNA sequence

ATGGGTGGTGAACAATGTTCTATAAGAAGGAAACTTAGAAGCAAATTTATGCATTGGCCGAGAGCTCCATTTCTTTGCAAGGAGAAATTTTGTGGGTATGTGCATCTTGCTGGAAGAAAACAATTTGTCAGTCATAGTGTTTTTTCAAAACTTTCATGGTCATCTTTCAAACGTGAACTTGGTAAT

Coding sequence (CDS)

ATGGGTGGTGAACAATGTTCTATAAGAAGGAAACTTAGAAGCAAATTTATGCATTGGCCGAGAGCTCCATTTCTTTGCAAGGAGAAATTTTGTGGGTATGTGCATCTTGCTGGAAGAAAACAATTTGTCAGTCATAGTGTTTTTTCAAAACTTTCATGGTCATCTTTCAAACGTGAACTTGGTAAT

Protein sequence

MGGEQCSIRRKLRSKFMHWPRAPFLCKEKFCGYVHLAGRKQFVSHSVFSKLSWSSFKRELGN
Homology
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BLAST of CsaV3_2G011960 vs. NCBI nr
Match: KAE8651784.1 (hypothetical protein Csa_006458, partial [Cucumis sativus])

HSP 1 Score: 137.1 bits (344), Expect = 5.1e-29
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0 

Query: 1  MGGEQCSIRRKLRSKFMHWPRAPFLCKEKFCGYVHLAGRKQFVSHSVFSKLSWSSFKREL 60
          MGGEQCSIRRKLRSKFMHWPRAPFLCKEKFCGYVHLAGRKQFVSHSVFSKLSWSSFKREL
Sbjct: 1  MGGEQCSIRRKLRSKFMHWPRAPFLCKEKFCGYVHLAGRKQFVSHSVFSKLSWSSFKREL 60

Query: 61 GN 63
          GN
Sbjct: 61 GN 62

The following BLAST results are available for this feature:
BLAST of CsaV3_2G011960 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8651784.15.1e-29100.00hypothetical protein Csa_006458, partial [Cucumis sativus][more]
BLAST of CsaV3_2G011960 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G011960 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G011960 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G011960.1CsaV3_2G011960.1mRNA