CsaV3_2G011080 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G011080
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Descriptionserine/threonine-protein phosphatase 7 long form homolog
Locationchr2: 8304422 .. 8304648 (+)
RNA-Seq ExpressionCsaV3_2G011080
SyntenyCsaV3_2G011080
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAGTTTGTCGAATTTCTATATGAAAAGTTACAACATATACGATGGACAGTTAGTCCTCTCATGTGTTTTTGCATGGATGAATGGCATCATCATGACAGAACACTCAGACAATTTGGTCTTAAACAAGATGTTCCACTCGACTTTAATACTGAACCACTTTTGCACAATGTTGACTTAAGAATTACTGATTGGTTCGATATAGTTGTCCATTTGGTGATGTGA

mRNA sequence

ATGGATATTAGTCCTCTCATGTGTTTTTGCATGGATGAATGGCATCATCATGACAGAACACTCAGACAATTTGGTCTTAAACAAGATGTTCCACTCGACTTTAATACTGAACCACTTTTGCACAATGTTGACTTAAGAATTACTGATTGGTTCGATATAGTTGTCCATTTGGTGATGTGA

Coding sequence (CDS)

ATGGATATTAGTCCTCTCATGTGTTTTTGCATGGATGAATGGCATCATCATGACAGAACACTCAGACAATTTGGTCTTAAACAAGATGTTCCACTCGACTTTAATACTGAACCACTTTTGCACAATGTTGACTTAAGAATTACTGATTGGTTCGATATAGTTGTCCATTTGGTGATGTGA

Protein sequence

MDISPLMCFCMDEWHHHDRTLRQFGLKQDVPLDFNTEPLLHNVDLRITDWFDIVVHLVM*
Homology
BLAST of CsaV3_2G011080 vs. NCBI nr
Match: KGN61425.1 (hypothetical protein Csa_006698 [Cucumis sativus])

HSP 1 Score: 134.8 bits (338), Expect = 2.5e-28
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0

Query: 1  MDISPLMCFCMDEWHHHDRTLRQFGLKQDVPLDFNTEPLLHNVDLRITDWFDIVVHLVM 60
          MDISPLMCFCMDEWHHHDRTLRQFGLKQDVPLDFNTEPLLHNVDLRITDWFDIVVHLVM
Sbjct: 1  MDISPLMCFCMDEWHHHDRTLRQFGLKQDVPLDFNTEPLLHNVDLRITDWFDIVVHLVM 59

BLAST of CsaV3_2G011080 vs. NCBI nr
Match: XP_008463092.1 (PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cucumis melo])

HSP 1 Score: 94.4 bits (233), Expect = 3.7e-16
Identity = 41/57 (71.93%), Postives = 46/57 (80.70%), Query Frame = 0

Query: 3  ISPLMCFCMDEWHHHDRTLRQFGLKQDVPLDFNTEPLLHNVDLRITDWFDIVVHLVM 60
          ISPL+CF + EWHH DR LRQFG++Q VP D NTEPLLHN+DLR TDW D V HLVM
Sbjct: 36 ISPLICFYIGEWHHPDRVLRQFGIQQVVPCDCNTEPLLHNIDLRTTDWSDRVAHLVM 92

BLAST of CsaV3_2G011080 vs. NCBI nr
Match: TYK02367.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 94.4 bits (233), Expect = 3.7e-16
Identity = 41/57 (71.93%), Postives = 46/57 (80.70%), Query Frame = 0

Query: 3   ISPLMCFCMDEWHHHDRTLRQFGLKQDVPLDFNTEPLLHNVDLRITDWFDIVVHLVM 60
           ISPL+CF + EWHH DR LRQFG++Q VP D NTEPLLHN+DLR TDW D V HLVM
Sbjct: 351 ISPLICFYIGEWHHPDRVLRQFGIQQVVPCDCNTEPLLHNIDLRTTDWSDRVAHLVM 407

BLAST of CsaV3_2G011080 vs. NCBI nr
Match: KAA0035034.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 94.4 bits (233), Expect = 3.7e-16
Identity = 41/57 (71.93%), Postives = 46/57 (80.70%), Query Frame = 0

Query: 3   ISPLMCFCMDEWHHHDRTLRQFGLKQDVPLDFNTEPLLHNVDLRITDWFDIVVHLVM 60
           ISPL+CF + EWHH DR LRQFG++Q VP D NTEPLLHN+DLR TDW D V HLVM
Sbjct: 335 ISPLICFYIGEWHHPDRVLRQFGIQQVVPCDCNTEPLLHNIDLRTTDWSDRVAHLVM 391

BLAST of CsaV3_2G011080 vs. NCBI nr
Match: KAA0036767.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 92.4 bits (228), Expect = 1.4e-15
Identity = 40/57 (70.18%), Postives = 45/57 (78.95%), Query Frame = 0

Query: 3   ISPLMCFCMDEWHHHDRTLRQFGLKQDVPLDFNTEPLLHNVDLRITDWFDIVVHLVM 60
           ISPL+CF + EWHH DR LRQFG++Q VP D NTEPLLHN+DLR  DW D V HLVM
Sbjct: 197 ISPLICFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDLRTADWSDRVAHLVM 253

BLAST of CsaV3_2G011080 vs. ExPASy Swiss-Prot
Match: Q9LNG5 (Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana OX=3702 GN=MAIL3 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 3.2e-07
Identity = 23/50 (46.00%), Postives = 31/50 (62.00%), Query Frame = 0

Query: 3   ISPLMCFCMDEWHHHDRTLRQFGLKQDVPLDFNTEPLLHNVDLRITDWFD 53
           ++PL+CF + EWH  DR LRQFGL Q +P   + E  LH +D R    +D
Sbjct: 346 VAPLICFDVVEWHRPDRVLRQFGLHQTIPAPCDNEKALHAIDKRGKSEYD 395

BLAST of CsaV3_2G011080 vs. ExPASy TrEMBL
Match: A0A0A0LHL8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G120910 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.2e-28
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0

Query: 1  MDISPLMCFCMDEWHHHDRTLRQFGLKQDVPLDFNTEPLLHNVDLRITDWFDIVVHLVM 60
          MDISPLMCFCMDEWHHHDRTLRQFGLKQDVPLDFNTEPLLHNVDLRITDWFDIVVHLVM
Sbjct: 1  MDISPLMCFCMDEWHHHDRTLRQFGLKQDVPLDFNTEPLLHNVDLRITDWFDIVVHLVM 59

BLAST of CsaV3_2G011080 vs. ExPASy TrEMBL
Match: A0A5A7SUU1 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G00870 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.8e-16
Identity = 41/57 (71.93%), Postives = 46/57 (80.70%), Query Frame = 0

Query: 3   ISPLMCFCMDEWHHHDRTLRQFGLKQDVPLDFNTEPLLHNVDLRITDWFDIVVHLVM 60
           ISPL+CF + EWHH DR LRQFG++Q VP D NTEPLLHN+DLR TDW D V HLVM
Sbjct: 335 ISPLICFYIGEWHHPDRVLRQFGIQQVVPCDCNTEPLLHNIDLRTTDWSDRVAHLVM 391

BLAST of CsaV3_2G011080 vs. ExPASy TrEMBL
Match: A0A5D3BSH3 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00680 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.8e-16
Identity = 41/57 (71.93%), Postives = 46/57 (80.70%), Query Frame = 0

Query: 3   ISPLMCFCMDEWHHHDRTLRQFGLKQDVPLDFNTEPLLHNVDLRITDWFDIVVHLVM 60
           ISPL+CF + EWHH DR LRQFG++Q VP D NTEPLLHN+DLR TDW D V HLVM
Sbjct: 351 ISPLICFYIGEWHHPDRVLRQFGIQQVVPCDCNTEPLLHNIDLRTTDWSDRVAHLVM 407

BLAST of CsaV3_2G011080 vs. ExPASy TrEMBL
Match: A0A1S3CIU3 (serine/threonine-protein phosphatase 7 long form homolog OS=Cucumis melo OX=3656 GN=LOC103501325 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.8e-16
Identity = 41/57 (71.93%), Postives = 46/57 (80.70%), Query Frame = 0

Query: 3  ISPLMCFCMDEWHHHDRTLRQFGLKQDVPLDFNTEPLLHNVDLRITDWFDIVVHLVM 60
          ISPL+CF + EWHH DR LRQFG++Q VP D NTEPLLHN+DLR TDW D V HLVM
Sbjct: 36 ISPLICFYIGEWHHPDRVLRQFGIQQVVPCDCNTEPLLHNIDLRTTDWSDRVAHLVM 92

BLAST of CsaV3_2G011080 vs. ExPASy TrEMBL
Match: A0A5A7UKC7 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold222G001140 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 6.8e-16
Identity = 40/57 (70.18%), Postives = 45/57 (78.95%), Query Frame = 0

Query: 3   ISPLMCFCMDEWHHHDRTLRQFGLKQDVPLDFNTEPLLHNVDLRITDWFDIVVHLVM 60
           ISPL+CF + EWHH DR LRQFG++Q VP D NTEPLLHN+DLR  DW D V HLVM
Sbjct: 494 ISPLICFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDLRTADWSDRVAHLVM 550

BLAST of CsaV3_2G011080 vs. TAIR 10
Match: AT1G48120.1 (hydrolases;protein serine/threonine phosphatases )

HSP 1 Score: 55.1 bits (131), Expect = 2.3e-08
Identity = 23/50 (46.00%), Postives = 31/50 (62.00%), Query Frame = 0

Query: 3   ISPLMCFCMDEWHHHDRTLRQFGLKQDVPLDFNTEPLLHNVDLRITDWFD 53
           ++PL+CF + EWH  DR LRQFGL Q +P   + E  LH +D R    +D
Sbjct: 346 VAPLICFDVVEWHRPDRVLRQFGLHQTIPAPCDNEKALHAIDKRGKSEYD 395

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN61425.12.5e-28100.00hypothetical protein Csa_006698 [Cucumis sativus][more]
XP_008463092.13.7e-1671.93PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cucumis mel... [more]
TYK02367.13.7e-1671.93serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... [more]
KAA0035034.13.7e-1671.93serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... [more]
KAA0036767.11.4e-1570.18serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... [more]
Match NameE-valueIdentityDescription
Q9LNG53.2e-0746.00Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana... [more]
Match NameE-valueIdentityDescription
A0A0A0LHL81.2e-28100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G120910 PE=4 SV=1[more]
A0A5A7SUU11.8e-1671.93Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... [more]
A0A5D3BSH31.8e-1671.93Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... [more]
A0A1S3CIU31.8e-1671.93serine/threonine-protein phosphatase 7 long form homolog OS=Cucumis melo OX=3656... [more]
A0A5A7UKC76.8e-1670.18Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... [more]
Match NameE-valueIdentityDescription
AT1G48120.12.3e-0846.00hydrolases;protein serine/threonine phosphatases [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G011080.1CsaV3_2G011080.1mRNA