CsaV3_2G009820 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G009820
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr2: 6405233 .. 6405468 (+)
RNA-Seq ExpressionCsaV3_2G009820
SyntenyCsaV3_2G009820
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GAACGATCAGACACCTTTACTGTGTTGTCAACGATTCCACTTCTAGTGGCAATGATCAGGTACCCTTACTCTGTCGTCAGGGATCCCACTTCTACTAGAAACAATCGGACCATTTATTTTGTCGGCAACGATCTCACTTCTAGTAGAAATGATGGGGTTCCTTTATTCTGTTGTCATGATCCTACTACTACAAGTGATCAAGCGTCCTTATCGTGTCGTCAGCGATCCTATTTCTT

mRNA sequence

GAACGATCAGACACCTTTACTGTGTTGTCAACGATTCCACTTCTAGTGGCAATGATCAGGTACCCTTACTCTGTCGTCAGGGATCCCACTTCTACTAGAAACAATCGGACCATTTATTTTGTCGGCAACGATCTCACTTCTAGTAGAAATGATGGGGTTCCTTTATTCTGTTGTCATGATCCTACTACTACAAGTGATCAAGCGTCCTTATCGTGTCGTCAGCGATCCTATTTCTT

Coding sequence (CDS)

GAACGATCAGACACCTTTACTGTGTTGTCAACGATTCCACTTCTAGTGGCAATGATCAGGTACCCTTACTCTGTCGTCAGGGATCCCACTTCTACTAGAAACAATCGGACCATTTATTTTGTCGGCAACGATCTCACTTCTAGTAGAAATGATGGGGTTCCTTTATTCTGTTGTCATGATCCTACTACTACAAGTGATCAAGCGTCCTTATCGTGTCGTCAGCGATCCTATTTCTT

Protein sequence

ERSDTFTVLSTIPLLVAMIRYPYSVVRDPTSTRNNRTIYFVGNDLTSSRNDGVPLFCCHDPTTTSDQASLSCRQRSYFX
Homology
[Close]
BLAST of CsaV3_2G009820 vs. NCBI nr
Match: KAE8651715.1 (hypothetical protein Csa_006216, partial [Cucumis sativus])

HSP 1 Score: 162.9 bits (411), Expect = 1.1e-36
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0 

Query: 1  ERSDTFTVLSTIPLLVAMIRYPYSVVRDPTSTRNNRTIYFVGNDLTSSRNDGVPLFCCHD 60
          ERSDTFTVLSTIPLLVAMIRYPYSVVRDPTSTRNNRTIYFVGNDLTSSRNDGVPLFCCHD
Sbjct: 1  ERSDTFTVLSTIPLLVAMIRYPYSVVRDPTSTRNNRTIYFVGNDLTSSRNDGVPLFCCHD 60

Query: 61 PTTTSDQASLSCRQRSYF 79
          PTTTSDQASLSCRQRSYF
Sbjct: 61 PTTTSDQASLSCRQRSYF 78

[Close]
BLAST of CsaV3_2G009820 vs. ExPASy TrEMBL
Match: A0A0A0LHK8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G075370 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 5.4e-37
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0 

Query: 1   ERSDTFTVLSTIPLLVAMIRYPYSVVRDPTSTRNNRTIYFVGNDLTSSRNDGVPLFCCHD 60
           ERSDTFTVLSTIPLLVAMIRYPYSVVRDPTSTRNNRTIYFVGNDLTSSRNDGVPLFCCHD
Sbjct: 30  ERSDTFTVLSTIPLLVAMIRYPYSVVRDPTSTRNNRTIYFVGNDLTSSRNDGVPLFCCHD 89

Query: 61  PTTTSDQASLSCRQRSYF 79
           PTTTSDQASLSCRQRSYF
Sbjct: 90  PTTTSDQASLSCRQRSYF 107

The following BLAST results are available for this feature:
BLAST of CsaV3_2G009820 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8651715.11.1e-36100.00hypothetical protein Csa_006216, partial [Cucumis sativus][more]
BLAST of CsaV3_2G009820 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G009820 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LHK85.4e-37100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G075370 PE=4 SV=1[more]
BLAST of CsaV3_2G009820 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G009820.1CsaV3_2G009820.1mRNA