CsaV3_2G009120 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G009120
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr2: 5639142 .. 5640548 (-)
RNA-Seq ExpressionCsaV3_2G009120
SyntenyCsaV3_2G009120
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTCTTAATAAAGTAATCCCCAAGCTTGAAGTTGGATGTTTATATGTACTAGTTCAGTAACAAATAAGAAGAAAACTAAGTGTCAACATTGATGGACAATGAAAGAAATTCAAGTTTGTTGGTGGTACAATTTTGAAAAAATCATTTTATAATTCTAGGTACTTGTAAGTTTCAAACACAATTACCTCTTTTTTCTTTAATAACCAATTCCAGTCGGAAAAAAAAAATTTAAGAAAGTGAGGGTACGAATTTTCATGTTCAACATTTTCAAATTTCTTACATTTTATCAACTTAACGTACATTTTCCACCCATTCTATCTATCTTTATGTTAGTTTTTTTAGTTAAAAATTTTCAATTGTTTAATTAGAACTACACGATTGTGTGTATATAATTTAAACGATCGTTTATTATAGTCAATACAATCATTTAACATGGTTAACATGATCATTTAGATTTAAAGCATTTTTTCCATCGTTTAAAACTAATTACACGATCATGTGGATATGATGTAAATGATCGTTTAACATTGTTAACCCGATCCTTTAACATAGTCAACACAATCGTTTAGATTTGAATCATTTTTTTTATCGCTTAATACACGATCAGGTATCATGATCATTTAGAAGAGAATTACACACGTATGGCTAATTAATTTATATTTTTCATAGTAGGTATGTGCACTTTTTCTGTTTTCAAAATTATAAATGTTTTGCTAGTTTGTTATTTTTTTTAAAAAAAAAACCCTAAATATAATTTAGTTTTGATTGGTTTTTAATAAAAAAGATTGAAACCAAATCAATAATTGTTGTATCAAAATGTATTAATTTTAAACTAAAAACACAAACCAAATTCATAAATGTATTTGGATGATTTGAATCGGTGGATTTTTGGTATTTCGTTTGTTGCACTTCCATCGCATACACGTAGTAATGTATATGGACAATTGCAAATTGCTTTTGCTTCTAAATAAAAGATTTATAGAACAGCGCAACAAATACAGCGGCTTGGCTTCTCGTTCGAGCTTACACCTTCCTATTTAGAACAAAACGAGAAGGAAATAAGAGAATAAATATCTCAATCTACAAATTCAGTGCTCTCTTCCTCTTCGGGTTCCCATTTTCCAACTACTTTCTCTATCGATTTCTTGGTATAATCATCTCCTTCCACCTTTACGATTCATTCTTTTTCACCTGTTTCTTTGCTCAATCTTTTTTCATTTCAACCCTCAAAAGGGTTTCTTGTATTATGAGGTTTAGTTGATTTGATATGCGTACTTCTTTTTTTTTTTTTTTTTGTTCAAACTTTATTGGGTTTGTGTGTTTCTTTAATTGGATTATTTGTTTTTAAGTTTCTTTTGCTCTGTGGTAGTTCTCTTGTTGTTGGAAGTTGAATTGAATAAGTGA

mRNA sequence

ATGTTTCTTAATAAAGTAATCCCCAAGCTTGAAGTTGGATGTTTATATAACAGCGCAACAAATACAGCGGCTTGGCTTCTCGTTCGAGCTTACACCTTCCTATTTAGAACAAAACGAGAAGGAAATAAGAGAATAAATATCTCAATCTACAAATTCAGTGCTCTCTTCCTCTTCGGGTTCCCATTTTCCAACTACTTTCTCTATCGATTTCTTGTTCTCTTGTTGTTGGAAGTTGAATTGAATAAGTGA

Coding sequence (CDS)

ATGTTTCTTAATAAAGTAATCCCCAAGCTTGAAGTTGGATGTTTATATAACAGCGCAACAAATACAGCGGCTTGGCTTCTCGTTCGAGCTTACACCTTCCTATTTAGAACAAAACGAGAAGGAAATAAGAGAATAAATATCTCAATCTACAAATTCAGTGCTCTCTTCCTCTTCGGGTTCCCATTTTCCAACTACTTTCTCTATCGATTTCTTGTTCTCTTGTTGTTGGAAGTTGAATTGAATAAGTGA

Protein sequence

MFLNKVIPKLEVGCLYNSATNTAAWLLVRAYTFLFRTKREGNKRINISIYKFSALFLFGFPFSNYFLYRFLVLLLLEVELNK*
Homology
[Close]
BLAST of CsaV3_2G009120 vs. NCBI nr
Match: KGN61208.1 (hypothetical protein Csa_006136 [Cucumis sativus])

HSP 1 Score: 163.3 bits (412), Expect = 8.9e-37
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0 

Query: 1  MFLNKVIPKLEVGCLYNSATNTAAWLLVRAYTFLFRTKREGNKRINISIYKFSALFLFGF 60
          MFLNKVIPKLEVGCLYNSATNTAAWLLVRAYTFLFRTKREGNKRINISIYKFSALFLFGF
Sbjct: 1  MFLNKVIPKLEVGCLYNSATNTAAWLLVRAYTFLFRTKREGNKRINISIYKFSALFLFGF 60

Query: 61 PFSNYFLYRFLVLLLLEVELNK 83
          PFSNYFLYRFLVLLLLEVELNK
Sbjct: 61 PFSNYFLYRFLVLLLLEVELNK 82

[Close]
BLAST of CsaV3_2G009120 vs. ExPASy TrEMBL
Match: A0A0A0LHF2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070260 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 4.3e-37
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0 

Query: 1  MFLNKVIPKLEVGCLYNSATNTAAWLLVRAYTFLFRTKREGNKRINISIYKFSALFLFGF 60
          MFLNKVIPKLEVGCLYNSATNTAAWLLVRAYTFLFRTKREGNKRINISIYKFSALFLFGF
Sbjct: 1  MFLNKVIPKLEVGCLYNSATNTAAWLLVRAYTFLFRTKREGNKRINISIYKFSALFLFGF 60

Query: 61 PFSNYFLYRFLVLLLLEVELNK 83
          PFSNYFLYRFLVLLLLEVELNK
Sbjct: 61 PFSNYFLYRFLVLLLLEVELNK 82

The following BLAST results are available for this feature:
BLAST of CsaV3_2G009120 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61208.18.9e-37100.00hypothetical protein Csa_006136 [Cucumis sativus][more]
BLAST of CsaV3_2G009120 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G009120 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LHF24.3e-37100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070260 PE=4 SV=1[more]
BLAST of CsaV3_2G009120 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G009120.1CsaV3_2G009120.1mRNA