CsaV3_2G008320 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G008320
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr2: 4618966 .. 4619214 (+)
RNA-Seq ExpressionCsaV3_2G008320
SyntenyCsaV3_2G008320
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCATTGGTGGTAAATGCTACCAAGGCTCAATGCTCGATTTCTGTTGAAGGGCTACTAGACACTATTGTAGTAAATACTTGAATTATTTTGAAACTTAGATGAAGCCAGAAAAGAAAATCTGTTATGTCCATGACAAGTACTTTTGTGAAACTTAAGCAAGAGCAGGATGAGGATGTCAAAATTATAGTACAACGTCACATGTATGATGCTTCCTTATGGTCCGATGATAGCCACACTCTCATTTAG

mRNA sequence

ATGTCATTGGTGGTAAATGCTACCAAGGCTCAATGCTCGATTTCTGTTGAAGGGCTACTAGACACTATTCAAGAGCAGGATGAGGATGTCAAAATTATAGTACAACGTCACATGTATGATGCTTCCTTATGGTCCGATGATAGCCACACTCTCATTTAG

Coding sequence (CDS)

ATGTCATTGGTGGTAAATGCTACCAAGGCTCAATGCTCGATTTCTGTTGAAGGGCTACTAGACACTATTCAAGAGCAGGATGAGGATGTCAAAATTATAGTACAACGTCACATGTATGATGCTTCCTTATGGTCCGATGATAGCCACACTCTCATTTAG

Protein sequence

MSLVVNATKAQCSISVEGLLDTIQEQDEDVKIIVQRHMYDASLWSDDSHTLI*
Homology
[Close]
BLAST of CsaV3_2G008320 vs. NCBI nr
Match: KGN61132.1 (hypothetical protein Csa_021154 [Cucumis sativus])

HSP 1 Score: 104.4 bits (259), Expect = 3.1e-19
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0 

Query: 1  MSLVVNATKAQCSISVEGLLDTIQEQDEDVKIIVQRHMYDASLWSDDSHTLI 53
          MSLVVNATKAQCSISVEGLLDTIQEQDEDVKIIVQRHMYDASLWSDDSHTLI
Sbjct: 1  MSLVVNATKAQCSISVEGLLDTIQEQDEDVKIIVQRHMYDASLWSDDSHTLI 52

[Close]
BLAST of CsaV3_2G008320 vs. ExPASy TrEMBL
Match: A0A0A0LK89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G058650 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.5e-19
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0 

Query: 1  MSLVVNATKAQCSISVEGLLDTIQEQDEDVKIIVQRHMYDASLWSDDSHTLI 53
          MSLVVNATKAQCSISVEGLLDTIQEQDEDVKIIVQRHMYDASLWSDDSHTLI
Sbjct: 1  MSLVVNATKAQCSISVEGLLDTIQEQDEDVKIIVQRHMYDASLWSDDSHTLI 52

The following BLAST results are available for this feature:
BLAST of CsaV3_2G008320 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61132.13.1e-19100.00hypothetical protein Csa_021154 [Cucumis sativus][more]
BLAST of CsaV3_2G008320 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G008320 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LK891.5e-19100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G058650 PE=4 SV=1[more]
BLAST of CsaV3_2G008320 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G008320.1CsaV3_2G008320.1mRNA