CsaV3_2G007920 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_2G007920
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	RING-H2 finger protein ATL56
Location	chr2: 4220900 .. 4221740 (+)
RNA-Seq Expression	CsaV3_2G007920
Synteny	CsaV3_2G007920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAGCATTGTAATTCCTAAGTATCATAAGACCAAAAGAAATGGCCCTACCTCCCCACAAGCCTTCGGAAAAAATCAAAACCCACACGCCCACGGTTTCCATTTCTATACTCTTTTTCCTCGAACTCTACATCATTCAACCATATCCCCAATCCCCCAATTTCCTTCAAAATTCCACTCATCCCTCGCCGCCCAACAACCCCCAAATGCCCTTTCAACCTTCTGCCGCCGTGAGCGGCCACCCACTTCCCCACCCTCCGCCACCGCCTAAGCCAGAGACTCAACTCCTTTCTCTGCTTCTCAAAATCGCCATCATGATTCTCTTAACCACTCTCTTCTTCGTCTTCCTCGGCCTCGCCACTGCCCTTCTCCTTATCCACCTCTGCGTCGCTAGTGCCCTCCATCGCCGTCGCCGATTCCACAGTCGCCATTCCCAATACTCCGATTCCTCATCTGGGTTCTCCCATCGTGACCTCAAAAAGCTTCTCCAGTTCCGATTCTCCAATTGGGTCAATCCCCATTCTCAAATTGACTGCTCTATTTGTCTTGATGGCTTTAGAAAAGGTCAGTGGTGTAGGAGACTTGGTGGGTGTGGGCATGTTTATCATCGCAAGTGTATTGATTCGTGGTTAGTTAGGGTTTCTGCTTGTCCTCTATGCCGACGATGTGTTCGATTGGATATGGAAGAACATGAAATTGATTGTGTAAGTTCTCGGAACTTTGAGCTTTTTTATGCTCTGTAACTGCCTTTAACTTTAGTTTAGTTTCTTCTTTCTTTTTTGATTACGTTCTCTTTTAGATGTATATAAAGTCGAATCAATGTTATTCGATGAAGGTTACT

mRNA sequence

ATGGCCCTACCTCCCCACAAGCCTTCGGAAAAAATCAAAACCCACACGCCCACGGTTTCCATTTCTATACTCTTTTTCCTCGAACTCTACATCATTCAACCATATCCCCAATCCCCCAATTTCCTTCAAAATTCCACTCATCCCTCGCCGCCCAACAACCCCCAAATGCCCTTTCAACCTTCTGCCGCCGTGAGCGGCCACCCACTTCCCCACCCTCCGCCACCGCCTAAGCCAGAGACTCAACTCCTTTCTCTGCTTCTCAAAATCGCCATCATGATTCTCTTAACCACTCTCTTCTTCGTCTTCCTCGGCCTCGCCACTGCCCTTCTCCTTATCCACCTCTGCGTCGCTAGTGCCCTCCATCGCCGTCGCCGATTCCACAGTCGCCATTCCCAATACTCCGATTCCTCATCTGGGTTCTCCCATCGTGACCTCAAAAAGCTTCTCCAGTTCCGATTCTCCAATTGGGTCAATCCCCATTCTCAAATTGACTGCTCTATTTGTCTTGATGGCTTTAGAAAAGGGTTTCTGCTTGTCCTCTATGCCGACGATGTGTTCGATTGGATATGGAAGAACATGAAATTGATTGTGTAA

Coding sequence (CDS)

ATGGCCCTACCTCCCCACAAGCCTTCGGAAAAAATCAAAACCCACACGCCCACGGTTTCCATTTCTATACTCTTTTTCCTCGAACTCTACATCATTCAACCATATCCCCAATCCCCCAATTTCCTTCAAAATTCCACTCATCCCTCGCCGCCCAACAACCCCCAAATGCCCTTTCAACCTTCTGCCGCCGTGAGCGGCCACCCACTTCCCCACCCTCCGCCACCGCCTAAGCCAGAGACTCAACTCCTTTCTCTGCTTCTCAAAATCGCCATCATGATTCTCTTAACCACTCTCTTCTTCGTCTTCCTCGGCCTCGCCACTGCCCTTCTCCTTATCCACCTCTGCGTCGCTAGTGCCCTCCATCGCCGTCGCCGATTCCACAGTCGCCATTCCCAATACTCCGATTCCTCATCTGGGTTCTCCCATCGTGACCTCAAAAAGCTTCTCCAGTTCCGATTCTCCAATTGGGTCAATCCCCATTCTCAAATTGACTGCTCTATTTGTCTTGATGGCTTTAGAAAAGGGTTTCTGCTTGTCCTCTATGCCGACGATGTGTTCGATTGGATATGGAAGAACATGAAATTGATTGTGTAA

Protein sequence

MALPPHKPSEKIKTHTPTVSISILFFLELYIIQPYPQSPNFLQNSTHPSPPNNPQMPFQPSAAVSGHPLPHPPPPPKPETQLLSLLLKIAIMILLTTLFFVFLGLATALLLIHLCVASALHRRRRFHSRHSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKGFLLVLYADDVFDWIWKNMKLIV*

Homology

[Close]

BLAST of CsaV3_2G007920 vs. NCBI nr
Match: KAE8651650.1 (hypothetical protein Csa_021355 [Cucumis sativus])

HSP 1 Score: 390.6 bits (1002), Expect = 8.2e-105
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MALPPHKPSEKIKTHTPTVSISILFFLELYIIQPYPQSPNFLQNSTHPSPPNNPQMPFQP 60
           MALPPHKPSEKIKTHTPTVSISILFFLELYIIQPYPQSPNFLQNSTHPSPPNNPQMPFQP
Sbjct: 1   MALPPHKPSEKIKTHTPTVSISILFFLELYIIQPYPQSPNFLQNSTHPSPPNNPQMPFQP 60

Query: 61  SAAVSGHPLPHPPPPPKPETQLLSLLLKIAIMILLTTLFFVFLGLATALLLIHLCVASAL 120
           SAAVSGHPLPHPPPPPKPETQLLSLLLKIAIMILLTTLFFVFLGLATALLLIHLCVASAL
Sbjct: 61  SAAVSGHPLPHPPPPPKPETQLLSLLLKIAIMILLTTLFFVFLGLATALLLIHLCVASAL 120

Query: 121 HRRRRFHSRHSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKGFLLVL 180
           HRRRRFHSRHSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKGFLLVL
Sbjct: 121 HRRRRFHSRHSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKGFLLVL 180

Query: 181 YADDVFDWIWKNMKLIV 198
           YADDVFDWIWKNMKLIV
Sbjct: 181 YADDVFDWIWKNMKLIV 197

[Close]

BLAST of CsaV3_2G007920 vs. NCBI nr
Match: XP_004149098.1 (RING-H2 finger protein ATL56 [Cucumis sativus])

HSP 1 Score: 233.8 bits (595), Expect = 1.3e-57
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 56  MPFQPSAAVSGHPLPHPPPPPKPETQLLSLLLKIAIMILLTTLFFVFLGLATALLLIHLC 115
           MPFQPSAAVSGHPLPHPPPPPKPETQLLSLLLKIAIMILLTTLFFVFLGLATALLLIHLC
Sbjct: 1   MPFQPSAAVSGHPLPHPPPPPKPETQLLSLLLKIAIMILLTTLFFVFLGLATALLLIHLC 60

Query: 116 VASALHRRRRFHSRHSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG 175
           VASALHRRRRFHSRHSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG
Sbjct: 61  VASALHRRRRFHSRHSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG 120

[Close]

BLAST of CsaV3_2G007920 vs. NCBI nr
Match: XP_008452306.1 (PREDICTED: RING-H2 finger protein ATL56 [Cucumis melo] >KAA0048646.1 RING-H2 finger protein ATL56 [Cucumis melo var. makuwa] >TYK10847.1 RING-H2 finger protein ATL56 [Cucumis melo var. makuwa])

HSP 1 Score: 223.8 bits (569), Expect = 1.3e-54
Identity = 117/120 (97.50%), Postives = 117/120 (97.50%), Query Frame = 0


Query: 56  MPFQPSAAVSGHPLPHPPPPPKPETQLLSLLLKIAIMILLTTLFFVFLGLATALLLIHLC 115
           MPFQ SAAVSG PLPHPPPPPKPETQLLSLLLKIAIMILLTTLFFVFLGLATALLLIHLC
Sbjct: 1   MPFQHSAAVSGDPLPHPPPPPKPETQLLSLLLKIAIMILLTTLFFVFLGLATALLLIHLC 60

Query: 116 VASALHRRRRFHSRHSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG 175
           VASALHRRRRFHSR SQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG
Sbjct: 61  VASALHRRRRFHSRRSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG 120

[Close]

BLAST of CsaV3_2G007920 vs. NCBI nr
Match: XP_038889631.1 (RING-H2 finger protein ATL56-like [Benincasa hispida])

HSP 1 Score: 216.5 bits (550), Expect = 2.1e-52
Identity = 112/120 (93.33%), Postives = 115/120 (95.83%), Query Frame = 0


Query: 56  MPFQPSAAVSGHPLPHPPPPPKPETQLLSLLLKIAIMILLTTLFFVFLGLATALLLIHLC 115
           MPFQ SAAVSG PLPHPPPPPKPETQLLSLLLKIAIMILLTTLFFVFLGLATALLLIHLC
Sbjct: 1   MPFQDSAAVSGDPLPHPPPPPKPETQLLSLLLKIAIMILLTTLFFVFLGLATALLLIHLC 60

Query: 116 VASALHRRRRFHSRHSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG 175
           VASALHR RRFH R +Q+SDSS+GFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG
Sbjct: 61  VASALHRHRRFHRRRAQFSDSSTGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG 120

[Close]

BLAST of CsaV3_2G007920 vs. NCBI nr
Match: XP_022997472.1 (RING-H2 finger protein ATL56-like [Cucurbita maxima])

HSP 1 Score: 180.6 bits (457), Expect = 1.3e-41
Identity = 96/120 (80.00%), Postives = 103/120 (85.83%), Query Frame = 0


Query: 56  MPFQPSAAVSGHPLPHPPPPPKPETQLLSLLLKIAIMILLTTLFFVFLGLATALLLIHLC 115
           MP Q SAA SG+PLPHPPPPPKPE +LLSLLLK+ +MI  TTLFFVFLGLATALLL HLC
Sbjct: 1   MPLQDSAAGSGYPLPHPPPPPKPEAKLLSLLLKVTVMIFFTTLFFVFLGLATALLLFHLC 60

Query: 116 VASALHRRRRFHSRHSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG 175
           +ASALHRRR      +QY DSSSGFS RDLKKLLQF+FSN VNPHSQIDCSICLDGFRKG
Sbjct: 61  IASALHRRR------AQYPDSSSGFSRRDLKKLLQFQFSNGVNPHSQIDCSICLDGFRKG 114

[Close]

BLAST of CsaV3_2G007920 vs. ExPASy Swiss-Prot
Match: Q9ZV51 (RING-H2 finger protein ATL56 OS=Arabidopsis thaliana OX=3702 GN=ATL56 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.2e-10
Identity = 50/127 (39.37%), Postives = 71/127 (55.91%), Query Frame = 0


Query: 50  PPNNPQMPFQPSAAVSGHPLPHPPPPPKPETQLLSLLLKIAIMILLTTLFFVFLGLATAL 109
           P NN ++  +P +    H      PPPKP+T++LSL L   IM  +  LF V +G+A+ L
Sbjct: 3   PTNNYRISGEPPSTTPSH------PPPKPKTRILSLFLVGVIMFSIFFLFLVLIGIASVL 62

Query: 110 LLIHLCVASALHRRRRFHSRHSQYSDSSSGFSHRDLKKLLQFRFSN-WVNPHSQIDCSIC 169
           +L  L  +   H RRR   R ++  +SS G S R +KKL QF+FS        + DC +C
Sbjct: 63  ILPLLLSSLHRHHRRR---RRNRRQESSDGLSSRFVKKLPQFKFSEPSTYTRYESDCVVC 120

Query: 170 LDGFRKG 176
            DGFR+G
Sbjct: 123 FDGFRQG 120

[Close]

BLAST of CsaV3_2G007920 vs. ExPASy TrEMBL
Match: A0A0A0LJ61 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G047820 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 3.3e-91
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MALPPHKPSEKIKTHTPTVSISILFFLELYIIQPYPQSPNFLQNSTHPSPPNNPQMPFQP 60
           MALPPHKPSEKIKTHTPTVSISILFFLELYIIQPYPQSPNFLQNSTHPSPPNNPQMPFQP
Sbjct: 1   MALPPHKPSEKIKTHTPTVSISILFFLELYIIQPYPQSPNFLQNSTHPSPPNNPQMPFQP 60

Query: 61  SAAVSGHPLPHPPPPPKPETQLLSLLLKIAIMILLTTLFFVFLGLATALLLIHLCVASAL 120
           SAAVSGHPLPHPPPPPKPETQLLSLLLKIAIMILLTTLFFVFLGLATALLLIHLCVASAL
Sbjct: 61  SAAVSGHPLPHPPPPPKPETQLLSLLLKIAIMILLTTLFFVFLGLATALLLIHLCVASAL 120

Query: 121 HRRRRFHSRHSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG 176
           HRRRRFHSRHSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG
Sbjct: 121 HRRRRFHSRHSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG 175

[Close]

BLAST of CsaV3_2G007920 vs. ExPASy TrEMBL
Match: A0A5D3CFV1 (RING-H2 finger protein ATL56 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00160 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 6.4e-55
Identity = 117/120 (97.50%), Postives = 117/120 (97.50%), Query Frame = 0


Query: 56  MPFQPSAAVSGHPLPHPPPPPKPETQLLSLLLKIAIMILLTTLFFVFLGLATALLLIHLC 115
           MPFQ SAAVSG PLPHPPPPPKPETQLLSLLLKIAIMILLTTLFFVFLGLATALLLIHLC
Sbjct: 1   MPFQHSAAVSGDPLPHPPPPPKPETQLLSLLLKIAIMILLTTLFFVFLGLATALLLIHLC 60

Query: 116 VASALHRRRRFHSRHSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG 175
           VASALHRRRRFHSR SQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG
Sbjct: 61  VASALHRRRRFHSRRSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG 120

[Close]

BLAST of CsaV3_2G007920 vs. ExPASy TrEMBL
Match: A0A1S3BTK8 (RING-H2 finger protein ATL56 OS=Cucumis melo OX=3656 GN=LOC103493368 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 6.4e-55
Identity = 117/120 (97.50%), Postives = 117/120 (97.50%), Query Frame = 0


Query: 56  MPFQPSAAVSGHPLPHPPPPPKPETQLLSLLLKIAIMILLTTLFFVFLGLATALLLIHLC 115
           MPFQ SAAVSG PLPHPPPPPKPETQLLSLLLKIAIMILLTTLFFVFLGLATALLLIHLC
Sbjct: 1   MPFQHSAAVSGDPLPHPPPPPKPETQLLSLLLKIAIMILLTTLFFVFLGLATALLLIHLC 60

Query: 116 VASALHRRRRFHSRHSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG 175
           VASALHRRRRFHSR SQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG
Sbjct: 61  VASALHRRRRFHSRRSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG 120

[Close]

BLAST of CsaV3_2G007920 vs. ExPASy TrEMBL
Match: A0A6J1K548 (RING-H2 finger protein ATL56-like OS=Cucurbita maxima OX=3661 GN=LOC111492378 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 6.2e-42
Identity = 96/120 (80.00%), Postives = 103/120 (85.83%), Query Frame = 0


Query: 56  MPFQPSAAVSGHPLPHPPPPPKPETQLLSLLLKIAIMILLTTLFFVFLGLATALLLIHLC 115
           MP Q SAA SG+PLPHPPPPPKPE +LLSLLLK+ +MI  TTLFFVFLGLATALLL HLC
Sbjct: 1   MPLQDSAAGSGYPLPHPPPPPKPEAKLLSLLLKVTVMIFFTTLFFVFLGLATALLLFHLC 60

Query: 116 VASALHRRRRFHSRHSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG 175
           +ASALHRRR      +QY DSSSGFS RDLKKLLQF+FSN VNPHSQIDCSICLDGFRKG
Sbjct: 61  IASALHRRR------AQYPDSSSGFSRRDLKKLLQFQFSNGVNPHSQIDCSICLDGFRKG 114

[Close]

BLAST of CsaV3_2G007920 vs. ExPASy TrEMBL
Match: A0A6J1ENH8 (RING-H2 finger protein ATL56-like OS=Cucurbita moschata OX=3662 GN=LOC111436213 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 6.2e-42
Identity = 96/120 (80.00%), Postives = 103/120 (85.83%), Query Frame = 0


Query: 56  MPFQPSAAVSGHPLPHPPPPPKPETQLLSLLLKIAIMILLTTLFFVFLGLATALLLIHLC 115
           MP Q SAA SG PLPHPPPPPKPE +LLSLLLK+A+MI  TTLFF+FLGLATALLL HLC
Sbjct: 1   MPLQDSAAGSGDPLPHPPPPPKPEAKLLSLLLKVAVMIFFTTLFFIFLGLATALLLFHLC 60

Query: 116 VASALHRRRRFHSRHSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRKG 175
           +ASALHRRR      +QY DSSSGFS RDLKKLLQF+FSN VNPHSQIDCSICLDGFRKG
Sbjct: 61  IASALHRRR------AQYPDSSSGFSRRDLKKLLQFQFSNGVNPHSQIDCSICLDGFRKG 114

[Close]

BLAST of CsaV3_2G007920 vs. TAIR 10
Match: AT2G18670.1 (RING/U-box superfamily protein )

HSP 1 Score: 68.2 bits (165), Expect = 8.7e-12
Identity = 50/127 (39.37%), Postives = 71/127 (55.91%), Query Frame = 0


Query: 50  PPNNPQMPFQPSAAVSGHPLPHPPPPPKPETQLLSLLLKIAIMILLTTLFFVFLGLATAL 109
           P NN ++  +P +    H      PPPKP+T++LSL L   IM  +  LF V +G+A+ L
Sbjct: 3   PTNNYRISGEPPSTTPSH------PPPKPKTRILSLFLVGVIMFSIFFLFLVLIGIASVL 62

Query: 110 LLIHLCVASALHRRRRFHSRHSQYSDSSSGFSHRDLKKLLQFRFSN-WVNPHSQIDCSIC 169
           +L  L  +   H RRR   R ++  +SS G S R +KKL QF+FS        + DC +C
Sbjct: 63  ILPLLLSSLHRHHRRR---RRNRRQESSDGLSSRFVKKLPQFKFSEPSTYTRYESDCVVC 120

Query: 170 LDGFRKG 176
            DGFR+G
Sbjct: 123 FDGFRQG 120

[Close]

BLAST of CsaV3_2G007920 vs. TAIR 10
Match: AT4G30370.1 (RING/U-box superfamily protein )

HSP 1 Score: 45.1 bits (105), Expect = 7.8e-05
Identity = 43/121 (35.54%), Postives = 60/121 (49.59%), Query Frame = 0


Query: 63  AVSGHPLPHPPPP----PKPETQLLSLLLKIAIMILLTTLFFVF----LGLATALLLIHL 122
           ++S  P P PPPP        T++LS  L   IMI +    F+F    LG          
Sbjct: 10  SISREPSPSPPPPKANTKNLPTKILSNFLIGLIMIPVAITAFIFILTSLGFTFFFAFYWF 69

Query: 123 CVASALHRRRRFHSRHSQYSDSSSGFSHRDLKKLLQFRFSNWVNPHSQIDCSICLDGFRK 176
              +  HR RR H RH +YSD   G S R +K+L QF++    + +   DC +C+DGFR+
Sbjct: 70  LQRNYRHRLRR-HRRH-EYSD---GLSPRCVKRLPQFKYCEPSSEYGGDDCVVCIDGFRQ 125

The following BLAST results are available for this feature:

BLAST of CsaV3_2G007920 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8651650.1	8.2e-105	100.00	hypothetical protein Csa_021355 [Cucumis sativus]	[more]
XP_004149098.1	1.3e-57	100.00	RING-H2 finger protein ATL56 [Cucumis sativus]	[more]
XP_008452306.1	1.3e-54	97.50	PREDICTED: RING-H2 finger protein ATL56 [Cucumis melo] >KAA0048646.1 RING-H2 fin...	[more]
XP_038889631.1	2.1e-52	93.33	RING-H2 finger protein ATL56-like [Benincasa hispida]	[more]
XP_022997472.1	1.3e-41	80.00	RING-H2 finger protein ATL56-like [Cucurbita maxima]	[more]

BLAST of CsaV3_2G007920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZV51	1.2e-10	39.37	RING-H2 finger protein ATL56 OS=Arabidopsis thaliana OX=3702 GN=ATL56 PE=2 SV=1	[more]

BLAST of CsaV3_2G007920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJ61	3.3e-91	100.00	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G047820 P...	[more]
A0A5D3CFV1	6.4e-55	97.50	RING-H2 finger protein ATL56 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3BTK8	6.4e-55	97.50	RING-H2 finger protein ATL56 OS=Cucumis melo OX=3656 GN=LOC103493368 PE=4 SV=1	[more]
A0A6J1K548	6.2e-42	80.00	RING-H2 finger protein ATL56-like OS=Cucurbita maxima OX=3661 GN=LOC111492378 PE...	[more]
A0A6J1ENH8	6.2e-42	80.00	RING-H2 finger protein ATL56-like OS=Cucurbita moschata OX=3662 GN=LOC111436213 ...	[more]

BLAST of CsaV3_2G007920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G18670.1	8.7e-12	39.37	RING/U-box superfamily protein	[more]
AT4G30370.1	7.8e-05	35.54	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..75
None	No IPR available	PANTHER	PTHR46539	E3 UBIQUITIN-PROTEIN LIGASE ATL42	coord: 54..175
None	No IPR available	PANTHER	PTHR46539:SF9	RING-H2 FINGER PROTEIN ATL56	coord: 54..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G007920.1	CsaV3_2G007920.1	mRNA