CsaV3_2G007780 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_2G007780
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	transmembrane protein 208 homolog
Location	chr2: 4048817 .. 4052891 (-)
RNA-Seq Expression	CsaV3_2G007780
Synteny	CsaV3_2G007780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGGAGTCCCTCTACTTCTCACAAATTAAATGAATATTATGATTCGACCATCTCCGATTTACACGTCAAAATCAAATCAGACGCTTCGTTCTTCTTATTCTTGTTCTTCACCATCTTCGGTTCATTCAGATACGCAGCTGCAAACTCATCTACATTCTGCTCTAATTTCAACTTACAGCTTCCGAATCCAGCTTCTATAGATGGCAAACCAAGGTGCAAAGAAGCGTAAGGAAGAGAACGCTCGTCATATGGCGAATCTTCGTCGCCTTATCATTGCCTGCAACGTATGAACTTCTATTTCATCATTTTCTCTCTATTCTTTTTCACTTTTTTATCCGTTGTTTGTGATTTATTATGCGTCTTCATAAATAATTCTACTTGTTGGCAGATTTCTGGAGTTCTATCGATTTTTCCTTTGTACTATGTGTTTTACTTTTGGTGATTTGACTTGAAATTTGGAGGTGGAAGTCATTTTGTACGATTGTATGTTTTTTTTTCATAAAGGAGCAGCAATTGATTTTGTCCTACTGTTGATAATTGAATATTCTTGTTGTAAGATTTTCTGGAGTTTCTCGAAGTAATCGAAATCGATCGGTTTTTTGTTTCGTTTTCTTTAATTGATTTGGAAGTAATTGTAGGGTAGGATGAGCTGTTTGTTTCATACACAAACAATTTACTACTTCGTTTCTCTGTCCATCTACTGAAAATTTTAATTTATCGGTTTCACTTCTAATGCTATTGATAACAAGAAGTGAAAAAAGTTTTTTCTGTTTATTTATTTTTCTAAAATCCCCAAATGCATGTTCTCCGAATCAAACTATTGTTAATTAAATTAGAGCAGGTATCAACAAATGTGAACTAGAAACGTAGGAATGTAAGATCGAGGGAGATTTTTTGTGATTTCTTCAATGCTATGAGATTACTTGAGAATTGGAAGGTGGAGAATTATTTAGATTGTCTTTGTTTCATGCAGTAAGTTCAGAGTTTGTTTTTGGTTTGTAAATTCTTGTTTAGGTTTTCTAGCATTTTTCTTAAGATTTGTCAAAGGTATAACCGTACAACTTATAAGCACCGTTCTGAGCATATCCAGAAACTTCATCATTTTTGCTCTAATCACGATTCATTAAGCCTACGAGCGCAGTGTGGCTTATGTTGTTTACTTTGTGTAACTTAAGTTGCTTATGTAGGTTATTTATATATTGGTTCGGATGCTGATTTTTCATTCAAGTTTCACCTGGAAACACTGGATTGGTCTGATTTTCACATCTGCAGCTTATTTTATTCCTTACAACCAACTTGAAAAAATGGCACAGCCAATCTATGGGGATGATGGTGAACTTCTAGATGGTGGATTTGATATGAGTACTGGTGGAATTTGTGGGTATGTCTTCTTTCTTCTTAATGTATAACCATTACATTTCAGTTTCATGCATGTTTTTATCTCCATTATATAAAGTAATCGTTGAGTACAGACCTGGCATGATTAATTGTTCTGTGACCCAAGTTTAAGGTGAGCGGTTTCTCTGAAACTTGCTAAGAATTGGTATGATATTGTTCACCAAATATCAAATTTGATGAGGAAGGTGAAGCTATTTTTCTTGATCGTCATTACAAAATTCAGTCTAAAATGCTTGAAATGGAAGAAACTAGTGATTTGCTTGGCTTAACTCTCATTTCTTCCCACTCTTCAAAAGCCCAGCATCTTCAAAGTTACCCCTTTTGTTGGGGCTTTGCTCTAAGATCCCTGAGCGCCTTTTTCTTCTTCCTTCATCTCTTAAATACTGGCCATATCAACCTCGTCAGAACCTTTCTTCTCAACATTTTGTAGCTTCAAAGGCCTTCCTTTAGCAGCTGAGATAAGGCTTAGGCCCAAGTAAAAAAAAAAAAAGAAAACAATGAGAGATCACTCGTGCATGGCAATTGGTGGTTCAATTCACTGATGTACAACTGTAGCATATTATTCTATTTCAGTTTCCTCTACAGTTACGATTTCCTTTCCGCCTAAATTTCATGACTAAATTGACCTTCATTTACAGAATTGTAAATTGATATTTAGTATAATTGTCGATTGGCTTAATAACTCTCCATGAGGGCAATATACACAAAAATCATGGTTGTTTGGTCGTTTGCTTTACTGGATCTTTTAATTTTCTTGAACATATTTCAAATTGGATAGTGATAAGCAAACTTGCAGCTTAAAAAGGTATTGGCTTATTTGGTTTTTAAGTTTTCTGGTAAATGGTTCTGCTCTACTGGTTGCTTTGATCAATTGATGTGTTTATCATCATCAATGTGACAGAACAATTCCATGGCAATATATTTGGCCTACAAAATATTGAGTAGTTTTGTGTGGGGTTTTTCATTCAGTCGCAAAGGTGGTGTTTGTTGGGAGTTGGGAGACATTAGAGATTGGGTTTAAATGATTTCAACTTGGAAAATCTTGTATTGTAATAAGTAGCTCTAGTCCTTTATGTTGGTGATATATAATTAAATTTGTCTTCAACCACCAGCCTAAGCTTTTGGTTAAATTTGTGGTTTGATATGATATCAGAACAGGTGGTCCAGGGAGGTCTTGTGTTTAAGTCCCTGCATGGTCGTTTCCTCTTCAATTAAAAATGATTTCCACTTGTTGGGTTTAATACTTTATAATATGGATGAAGTAATTGAAAGGAACAAATGGCTTTTCAGTGACTCTTTTTCTTCTTTTAATCGTTTTAGGAATCTTGTTGTGTCGCCTGCTTTTTCTTGGGAGTAAAACTAAGCATCCCTAAAACTAAGCATCCCTTCTCTCATTTCATCTTTTCTTTTTTAGTCAGTAATTGGTGATCCCTTATGTAACAACCTTTTGCTGTTCGTGGTTCTTCATTGTTTATGATGAATTGTTTCTTTTACCGAAAAAATTATGGATTGATTTAAAAAAAGAGGTTGGAATCCAAAATGGCTAGCCTTCCATCTGTTAACCCTTTCTTGACATTTCAATAACTAATCGAAACATCTTGATGGTTTATCTTGTTTTTTGCAGCTACATGCATGATGTGATCTACATTACAAGCTTTGTGCAAATAATGTCAATCCTCTCCGGGAAGTTTTGGTACACCTACCTTGTGGTAAGGTCTATTTACTTTTGAAATTGAACTTTAGGCATAATTAGTACTAATATCCTTGCGCCAACCCTGATCTTTGGGTGGGAATTTCTAAACATCAATGTTTGTGCATCACTGCATCAAATAGAAAATTCAAAATACTTTGCCAAGGATCCATATCTAATTAGTATGTAATGTTCATTCTCCTGTTCTTCTGCAGATTCCAGGATTCGGAGTATATAAATCTTCCGGTTTTATTCGAGGTTTGTTGTCGCAAGGTTCTGAGGTAATCTCTCCCCACTCCAATCAAGATTTCTATATTTAAAATCAAGGTCCGGCCTCCTCTTTTTATACACGTATATACTCGTGTGTGTAATTTAGGATGAACCCGAGGACGAGAAGACTCGCAAGAAGAGGGAAAAGATGGAGAAGAAAGCCTCAAGAGTGAAATTTATGAAGACGAAGAACAGATAAAAAAGACTAATCAACTTATGTTATCAAATGCAAAATTGAGGAAAAGGAATGAAGACACAGTCGAGTTATAGGTACCGTTTGAAGTTAATTTAAGTATGTGTATTTGATCTGACTAATTATAAACAGGTATGAGAGGCTGAAACAGTTCATTGTAAAAACTCTTTATTCAGTCAACTGAGGATTTTAGAAGGTTCAATCCAGATTCCTCTTTCAAAATGACATCAACAGGTACACAACTTTTGCAGCTTTGGGTTTCATTTAGTAGAGAGAGATACCAAAGCAATAGAGTTTAAAATCTCTTTTAAATTTGTTTCTACACTTGTGGATAGAATTTGAGCTCAACAATTTTGCGTTATTTTCTTACGACAATTTTACTCACCGTAATGCTTGAGTTTTTTAAGTTATAGTTTTTATGGATGGAGTAATGTACTGGTTTTATGAAAGCAATATCTTGTCCACAAAATCCAACAAAATATACTTTATGGAAATAAACCGAACTTAAACACATTAATAAAAAG

mRNA sequence

ATGGCAAACCAAGGTGCAAAGAAGCGTAAGGAAGAGAACGCTCGTCATATGGCGAATCTTCGTCGCCTTATCATTGCCTGCAACGTTATTTATATATTGGTTCGGATGCTGATTTTTCATTCAAGTTTCACCTGGAAACACTGGATTGGTCTGATTTTCACATCTGCAGCTTATTTTATTCCTTACAACCAACTTGAAAAAATGGCACAGCCAATCTATGGGGATGATGGTGAACTTCTAGATGGTGGATTTGATATGAGTACTGGTGGAATTTGTGGCTACATGCATGATGTGATCTACATTACAAGCTTTGTGCAAATAATGTCAATCCTCTCCGGGAAGTTTTGGTACACCTACCTTGTGATTCCAGGATTCGGAGTATATAAATCTTCCGGTTTTATTCGAGGTTTGTTGTCGCAAGGTTCTGAGGATGAACCCGAGGACGAGAAGACTCGCAAGAAGAGGGAAAAGATGGAGAAGAAAGCCTCAAGAGTGAAATTTATGAAGACGAAGAACAGATAA

Coding sequence (CDS)

ATGGCAAACCAAGGTGCAAAGAAGCGTAAGGAAGAGAACGCTCGTCATATGGCGAATCTTCGTCGCCTTATCATTGCCTGCAACGTTATTTATATATTGGTTCGGATGCTGATTTTTCATTCAAGTTTCACCTGGAAACACTGGATTGGTCTGATTTTCACATCTGCAGCTTATTTTATTCCTTACAACCAACTTGAAAAAATGGCACAGCCAATCTATGGGGATGATGGTGAACTTCTAGATGGTGGATTTGATATGAGTACTGGTGGAATTTGTGGCTACATGCATGATGTGATCTACATTACAAGCTTTGTGCAAATAATGTCAATCCTCTCCGGGAAGTTTTGGTACACCTACCTTGTGATTCCAGGATTCGGAGTATATAAATCTTCCGGTTTTATTCGAGGTTTGTTGTCGCAAGGTTCTGAGGATGAACCCGAGGACGAGAAGACTCGCAAGAAGAGGGAAAAGATGGAGAAGAAAGCCTCAAGAGTGAAATTTATGAAGACGAAGAACAGATAA

Protein sequence

MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWIGLIFTSAAYFIPYNQLEKMAQPIYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYLVIPGFGVYKSSGFIRGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR*

Homology

[Close]

BLAST of CsaV3_2G007780 vs. NCBI nr
Match: XP_004144713.1 (transmembrane protein 208 homolog [Cucumis sativus] >KGN61073.1 hypothetical protein Csa_021142 [Cucumis sativus])

HSP 1 Score: 341.7 bits (875), Expect = 3.8e-90
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWIGLIFTSAAYFI 60
           MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWIGLIFTSAAYFI
Sbjct: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWIGLIFTSAAYFI 60

Query: 61  PYNQLEKMAQPIYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120
           PYNQLEKMAQPIYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL
Sbjct: 61  PYNQLEKMAQPIYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120

Query: 121 VIPGFGVYKSSGFIRGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR 174
           VIPGFGVYKSSGFIRGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR
Sbjct: 121 VIPGFGVYKSSGFIRGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR 173

[Close]

BLAST of CsaV3_2G007780 vs. NCBI nr
Match: XP_038889500.1 (transmembrane protein 208 homolog [Benincasa hispida])

HSP 1 Score: 325.9 bits (834), Expect = 2.2e-85
Identity = 164/173 (94.80%), Postives = 168/173 (97.11%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWIGLIFTSAAYFI 60
           MANQGAKKRKEENARH+ANLRRLIIACNVIYILVRMLIFHSSFTWKHWIGLI TSAAYFI
Sbjct: 1   MANQGAKKRKEENARHVANLRRLIIACNVIYILVRMLIFHSSFTWKHWIGLIVTSAAYFI 60

Query: 61  PYNQLEKMAQPIYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120
           PYNQLEKMA P YGDDGELLDGGFDMSTGGICGY+HDVIYITSFVQIMSILSGKFWYTYL
Sbjct: 61  PYNQLEKMANPTYGDDGELLDGGFDMSTGGICGYLHDVIYITSFVQIMSILSGKFWYTYL 120

Query: 121 VIPGFGVYKSSGFIRGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR 174
           VIP FG+YKSSG IRGLLSQGSEDEPEDEKTRKKREKMEKKASRVKF+KTKNR
Sbjct: 121 VIPAFGIYKSSGLIRGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR 173

[Close]

BLAST of CsaV3_2G007780 vs. NCBI nr
Match: XP_008452429.1 (PREDICTED: transmembrane protein 208 homolog [Cucumis melo])

HSP 1 Score: 325.1 bits (832), Expect = 3.7e-85
Identity = 165/173 (95.38%), Postives = 167/173 (96.53%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWIGLIFTSAAYFI 60
           MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWIGLI TS AYFI
Sbjct: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWIGLIVTSVAYFI 60

Query: 61  PYNQLEKMAQPIYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120
           PYNQLEKMA+P YGDDGELLDGGFDMST GICGYMHDVIYITSFVQIMSILSGKFWYTYL
Sbjct: 61  PYNQLEKMAKPTYGDDGELLDGGFDMSTDGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120

Query: 121 VIPGFGVYKSSGFIRGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR 174
           VIP FGVYKSSG IRGLLSQGSEDEPEDEKTRKKREKMEKKASRVKF+KTKNR
Sbjct: 121 VIPAFGVYKSSGLIRGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR 173

[Close]

BLAST of CsaV3_2G007780 vs. NCBI nr
Match: XP_022946520.1 (transmembrane protein 208 homolog [Cucurbita moschata] >XP_022999772.1 transmembrane protein 208 homolog [Cucurbita maxima] >KAG6599131.1 Transmembrane protein 208, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030072.1 Transmembrane protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 322.4 bits (825), Expect = 2.4e-84
Identity = 163/173 (94.22%), Postives = 165/173 (95.38%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWIGLIFTSAAYFI 60
           MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHW+GLI TSAAYFI
Sbjct: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60

Query: 61  PYNQLEKMAQPIYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120
           PYNQL KMA P YGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL
Sbjct: 61  PYNQLAKMADPTYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120

Query: 121 VIPGFGVYKSSGFIRGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR 174
           VIP FGVYKSSG I+ LLS GSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR
Sbjct: 121 VIPAFGVYKSSGLIKSLLSHGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR 173

[Close]

BLAST of CsaV3_2G007780 vs. NCBI nr
Match: XP_023521195.1 (transmembrane protein 208 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 320.5 bits (820), Expect = 9.1e-84
Identity = 162/173 (93.64%), Postives = 164/173 (94.80%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWIGLIFTSAAYFI 60
           MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHW+GLI TSAAYFI
Sbjct: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60

Query: 61  PYNQLEKMAQPIYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120
           PYNQL KMA P YGDDGELLDGGFDM TGGICGYMHDVIYITSFVQIMSILSGKFWYTYL
Sbjct: 61  PYNQLAKMADPTYGDDGELLDGGFDMRTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120

Query: 121 VIPGFGVYKSSGFIRGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR 174
           VIP FGVYKSSG I+ LLS GSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR
Sbjct: 121 VIPAFGVYKSSGLIKSLLSHGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR 173

[Close]

BLAST of CsaV3_2G007780 vs. ExPASy Swiss-Prot
Match: Q54UB0 (Transmembrane protein 208 homolog OS=Dictyostelium discoideum OX=44689 GN=tmem208 PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.6e-19
Identity = 60/173 (34.68%), Postives = 96/173 (55.49%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWIGLIFTSAAYFI 60
           MAN GAKKRK +N + +  +R ++ A  + YIL R++    +F    W   +  +A    
Sbjct: 1   MANSGAKKRKTQNEKELFKVRLIMAAGTIPYILYRVVYHSETFGGWLWFAYLSLNALNMF 60

Query: 61  PYNQLEKMAQPIYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120
            Y  +  M +  Y ++GEL+DGG D++ GG+  Y  D+IY+   +Q + ++S K  Y  L
Sbjct: 61  AYYIITSMCKLTYDNNGELIDGGSDLNQGGMTEYYFDIIYVCCIIQGLGLISDKCLYLIL 120

Query: 121 VIPGFGVYKSSGFIRG--LLSQGSEDEPEDEKTRKKREKMEKK--ASRVKFMK 170
           VIP F ++K      G  L S+  + +   E+  K+REKMEKK    +VK++K
Sbjct: 121 VIPAFAIFKIWKTFIGPYLASRNQQQQQPQEEKSKRREKMEKKQEKQKVKYVK 173

[Close]

BLAST of CsaV3_2G007780 vs. ExPASy Swiss-Prot
Match: Q6NYP0 (Transmembrane protein 208 OS=Danio rerio OX=7955 GN=tmem208 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 4.8e-19
Identity = 58/167 (34.73%), Postives = 95/167 (56.89%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWIGLIFTSAAYFI 60
           +  +G K+  EEN   +    R+I+  N IYI V +L+F++S ++  W  L+F  A Y  
Sbjct: 7   VGTKGKKQIHEENQDTLKFYSRIILGANAIYIAVNLLLFYNSSSFWTWFSLMFAVAVYVG 66

Query: 61  PYNQLEKMAQPIYGDDGELLDGGFDMS-TGGICGYMHDVIYITSFVQIMSILSGKFWYTY 120
            Y  +  MA+P + +DG LLDGG D++   G+  ++ DVI +T+ VQ++S LS  FWY +
Sbjct: 67  SYRSMSAMAKPAFAEDGSLLDGGIDLNMEQGMAEHLKDVILLTAIVQVLSTLSSYFWYLW 126

Query: 121 LVIPGFGVYKS-SGFIRGLLSQGSEDEPED-EKTRKKREKMEKKASR 165
           L+ P   ++     F+    S  S+  PE+ EK  KK+ + E++  R
Sbjct: 127 LLAPARALHLLWVNFLGPWFSADSQAAPEENEKNDKKQRRQERRQMR 173

[Close]

BLAST of CsaV3_2G007780 vs. ExPASy Swiss-Prot
Match: Q3SZZ5 (Transmembrane protein 208 OS=Bos taurus OX=9913 GN=TMEM208 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.5e-15
Identity = 49/162 (30.25%), Postives = 88/162 (54.32%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWIGLIFTSAAYFI 60
           +  +G K+  EEN   +    R+I+  N IY LV +++F+SS ++  W+ L+F+ A Y  
Sbjct: 7   VGTRGKKQIFEENKETLKFYLRIILGANAIYCLVTLVVFYSSASFWAWMALLFSLAVYGA 66

Query: 61  PYNQLEKMAQPIYGDDGELLDGGFDMS-TGGICGYMHDVIYITSFVQIMSILSGKFWYTY 120
            Y+ +  MA+  + +DG L+DGG D++   G+  ++ DVI +T+ VQ++S  S   W  +
Sbjct: 67  SYHSMSSMARAAFSEDGALVDGGMDLNMEQGMAEHLKDVILLTAIVQVLSCFSLYIWSFW 126

Query: 121 LVIPGFGVYKSSGFIRGLLSQGSEDEPEDEKTRKKREKMEKK 162
           L+ PG  +Y     + G         P  E   K++ + E++
Sbjct: 127 LLAPGRALYLLWVNVLGPWFTADSGAPAPEHNEKRQRRQERR 168

[Close]

BLAST of CsaV3_2G007780 vs. ExPASy Swiss-Prot
Match: Q9BTX3 (Transmembrane protein 208 OS=Homo sapiens OX=9606 GN=TMEM208 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.1e-14
Identity = 49/162 (30.25%), Postives = 86/162 (53.09%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWIGLIFTSAAYFI 60
           +  +G K+  EEN   +    R+I+  N IY LV ++ F+SS ++  W+ L F+ A Y  
Sbjct: 7   VGTRGKKQIFEENRETLKFYLRIILGANAIYCLVTLVFFYSSASFWAWLALGFSLAVYGA 66

Query: 61  PYNQLEKMAQPIYGDDGELLDGGFDMS-TGGICGYMHDVIYITSFVQIMSILSGKFWYTY 120
            Y+ +  MA+  + +DG L+DGG D++   G+  ++ DVI +T+ VQ++S  S   W  +
Sbjct: 67  SYHSMSSMARAAFSEDGALMDGGMDLNMEQGMAEHLKDVILLTAIVQVLSCFSLYVWSFW 126

Query: 121 LVIPGFGVYKSSGFIRGLLSQGSEDEPEDEKTRKKREKMEKK 162
           L+ PG  +Y     + G         P  E   K++ + E++
Sbjct: 127 LLAPGRALYLLWVNVLGPWFTADSGTPAPEHNEKRQRRQERR 168

[Close]

BLAST of CsaV3_2G007780 vs. ExPASy Swiss-Prot
Match: Q9CR96 (Transmembrane protein 208 OS=Mus musculus OX=10090 GN=Tmem208 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.7e-14
Identity = 49/162 (30.25%), Postives = 86/162 (53.09%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWIGLIFTSAAYFI 60
           +  +G K+  EEN   +    R+I+  N IY LV ++ F+SS ++  W+ L F+ A Y  
Sbjct: 7   VGTRGKKQIFEENKETLKFYLRIILGANAIYCLVTLVFFYSSASFWAWMALGFSLAVYGA 66

Query: 61  PYNQLEKMAQPIYGDDGELLDGGFDMS-TGGICGYMHDVIYITSFVQIMSILSGKFWYTY 120
            Y+ +  MA+  + +DG L+DGG D++   G+  ++ DVI +T+ VQ++S  S   W  +
Sbjct: 67  SYHSMSSMARASFSEDGSLMDGGMDLNMEQGMAEHLKDVILLTAIVQVLSCFSLYIWSFW 126

Query: 121 LVIPGFGVYKSSGFIRGLLSQGSEDEPEDEKTRKKREKMEKK 162
           L+ PG  +Y     + G         P  E   K++ + E++
Sbjct: 127 LLAPGRALYLLWVNVLGPWFTADSGAPAPELNEKRQRRQERR 168

[Close]

BLAST of CsaV3_2G007780 vs. ExPASy TrEMBL
Match: A0A0A0LH45 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G036710 PE=3 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 1.9e-90
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWIGLIFTSAAYFI 60
           MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWIGLIFTSAAYFI
Sbjct: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWIGLIFTSAAYFI 60

Query: 61  PYNQLEKMAQPIYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120
           PYNQLEKMAQPIYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL
Sbjct: 61  PYNQLEKMAQPIYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120

Query: 121 VIPGFGVYKSSGFIRGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR 174
           VIPGFGVYKSSGFIRGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR
Sbjct: 121 VIPGFGVYKSSGFIRGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR 173

[Close]

BLAST of CsaV3_2G007780 vs. ExPASy TrEMBL
Match: A0A1S3BUY1 (transmembrane protein 208 homolog OS=Cucumis melo OX=3656 GN=LOC103493461 PE=3 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.8e-85
Identity = 165/173 (95.38%), Postives = 167/173 (96.53%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWIGLIFTSAAYFI 60
           MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWIGLI TS AYFI
Sbjct: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWIGLIVTSVAYFI 60

Query: 61  PYNQLEKMAQPIYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120
           PYNQLEKMA+P YGDDGELLDGGFDMST GICGYMHDVIYITSFVQIMSILSGKFWYTYL
Sbjct: 61  PYNQLEKMAKPTYGDDGELLDGGFDMSTDGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120

Query: 121 VIPGFGVYKSSGFIRGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR 174
           VIP FGVYKSSG IRGLLSQGSEDEPEDEKTRKKREKMEKKASRVKF+KTKNR
Sbjct: 121 VIPAFGVYKSSGLIRGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFVKTKNR 173

[Close]

BLAST of CsaV3_2G007780 vs. ExPASy TrEMBL
Match: A0A6J1KBQ8 (transmembrane protein 208 homolog OS=Cucurbita maxima OX=3661 GN=LOC111494021 PE=3 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.2e-84
Identity = 163/173 (94.22%), Postives = 165/173 (95.38%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWIGLIFTSAAYFI 60
           MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHW+GLI TSAAYFI
Sbjct: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60

Query: 61  PYNQLEKMAQPIYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120
           PYNQL KMA P YGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL
Sbjct: 61  PYNQLAKMADPTYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120

Query: 121 VIPGFGVYKSSGFIRGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR 174
           VIP FGVYKSSG I+ LLS GSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR
Sbjct: 121 VIPAFGVYKSSGLIKSLLSHGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR 173

[Close]

BLAST of CsaV3_2G007780 vs. ExPASy TrEMBL
Match: A0A6J1G433 (transmembrane protein 208 homolog OS=Cucurbita moschata OX=3662 GN=LOC111450556 PE=3 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.2e-84
Identity = 163/173 (94.22%), Postives = 165/173 (95.38%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWIGLIFTSAAYFI 60
           MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHW+GLI TSAAYFI
Sbjct: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60

Query: 61  PYNQLEKMAQPIYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120
           PYNQL KMA P YGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL
Sbjct: 61  PYNQLAKMADPTYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120

Query: 121 VIPGFGVYKSSGFIRGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR 174
           VIP FGVYKSSG I+ LLS GSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR
Sbjct: 121 VIPAFGVYKSSGLIKSLLSHGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR 173

[Close]

BLAST of CsaV3_2G007780 vs. ExPASy TrEMBL
Match: A0A6J1DIN6 (transmembrane protein 208 homolog OS=Momordica charantia OX=3673 GN=LOC111020872 PE=3 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 8.3e-83
Identity = 159/173 (91.91%), Postives = 164/173 (94.80%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWIGLIFTSAAYFI 60
           MANQGAKKRKEEN RHMANLRRLIIACNVIYI+VR+LIFHSSFTWKHWIGLI TSAAYFI
Sbjct: 1   MANQGAKKRKEENVRHMANLRRLIIACNVIYIMVRLLIFHSSFTWKHWIGLIVTSAAYFI 60

Query: 61  PYNQLEKMAQPIYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120
           PYNQL KMA P YGDDGELLDGGFDMSTGGICGY+HDVIYITSFVQIMSI+SGKFWYTYL
Sbjct: 61  PYNQLAKMANPTYGDDGELLDGGFDMSTGGICGYLHDVIYITSFVQIMSIVSGKFWYTYL 120

Query: 121 VIPGFGVYKSSGFIRGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR 174
           VIP FG YKSSGFIRGLLSQGSED  EDEKTRKKREKMEKKASRVKF+KTKNR
Sbjct: 121 VIPAFGAYKSSGFIRGLLSQGSEDVAEDEKTRKKREKMEKKASRVKFLKTKNR 173

[Close]

BLAST of CsaV3_2G007780 vs. TAIR 10
Match: AT2G23940.1 (Protein of unknown function (DUF788) )

HSP 1 Score: 260.8 bits (665), Expect = 8.0e-70
Identity = 128/173 (73.99%), Postives = 150/173 (86.71%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWIGLIFTSAAYFI 60
           MANQGAKKRKEENA+HMA LRR+IIA N +Y +VRMLIF+SSFTWKHWIGL+ TS AY  
Sbjct: 1   MANQGAKKRKEENAKHMAKLRRIIIASNAVYFVVRMLIFYSSFTWKHWIGLVITSLAYAF 60

Query: 61  PYNQLEKMAQPIYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120
           PY QL++MA+P   DDGEL+DGGFDM+TGGICGY+HDVIYIT FVQ+ SI++GKFWYTYL
Sbjct: 61  PYKQLDQMAKPSVTDDGELIDGGFDMTTGGICGYLHDVIYITCFVQLASIITGKFWYTYL 120

Query: 121 VIPGFGVYKSSGFIRGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR 174
           VIP FGVYK+SG IRG +SQGSE   EDEK+RKKREKME+KASR + +KT+ R
Sbjct: 121 VIPAFGVYKASGLIRGFMSQGSEGGVEDEKSRKKREKMERKASRGQVVKTRTR 173

[Close]

BLAST of CsaV3_2G007780 vs. TAIR 10
Match: AT4G30500.1 (Protein of unknown function (DUF788) )

HSP 1 Score: 242.7 bits (618), Expect = 2.3e-64
Identity = 120/173 (69.36%), Postives = 144/173 (83.24%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWIGLIFTSAAYFI 60
           MANQGAKKRK+ENARHMA LR ++I CN++Y+LVR++I HSS TWK+WIGL+ TS  Y I
Sbjct: 1   MANQGAKKRKDENARHMAKLRLIMILCNILYVLVRVIISHSSHTWKNWIGLVLTSLGYGI 60

Query: 61  PYNQLEKMAQPIYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120
           PY  L +MA+P   D GELLDGGFDMST G+CGY+HDV+YIT FVQ+ SI+SGKFWY YL
Sbjct: 61  PYKLLHQMAKPSVSDAGELLDGGFDMSTPGMCGYLHDVLYITCFVQVGSIISGKFWYAYL 120

Query: 121 VIPGFGVYKSSGFIRGLLSQGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR 174
           VIP FG YK+SG I+GLLS GSE   EDEKTRKKREKME+KASR + +KT++R
Sbjct: 121 VIPAFGAYKASGLIKGLLSHGSEGGVEDEKTRKKREKMERKASRGQVVKTRSR 173

The following BLAST results are available for this feature:

BLAST of CsaV3_2G007780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144713.1	3.8e-90	100.00	transmembrane protein 208 homolog [Cucumis sativus] >KGN61073.1 hypothetical pro...	[more]
XP_038889500.1	2.2e-85	94.80	transmembrane protein 208 homolog [Benincasa hispida]	[more]
XP_008452429.1	3.7e-85	95.38	PREDICTED: transmembrane protein 208 homolog [Cucumis melo]	[more]
XP_022946520.1	2.4e-84	94.22	transmembrane protein 208 homolog [Cucurbita moschata] >XP_022999772.1 transmemb...	[more]
XP_023521195.1	9.1e-84	93.64	transmembrane protein 208 homolog [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_2G007780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54UB0	1.6e-19	34.68	Transmembrane protein 208 homolog OS=Dictyostelium discoideum OX=44689 GN=tmem20...	[more]
Q6NYP0	4.8e-19	34.73	Transmembrane protein 208 OS=Danio rerio OX=7955 GN=tmem208 PE=2 SV=1	[more]
Q3SZZ5	2.5e-15	30.25	Transmembrane protein 208 OS=Bos taurus OX=9913 GN=TMEM208 PE=2 SV=1	[more]
Q9BTX3	2.1e-14	30.25	Transmembrane protein 208 OS=Homo sapiens OX=9606 GN=TMEM208 PE=1 SV=1	[more]
Q9CR96	2.7e-14	30.25	Transmembrane protein 208 OS=Mus musculus OX=10090 GN=Tmem208 PE=2 SV=1	[more]

BLAST of CsaV3_2G007780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LH45	1.9e-90	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G036710 PE=3 SV=1	[more]
A0A1S3BUY1	1.8e-85	95.38	transmembrane protein 208 homolog OS=Cucumis melo OX=3656 GN=LOC103493461 PE=3 S...	[more]
A0A6J1KBQ8	1.2e-84	94.22	transmembrane protein 208 homolog OS=Cucurbita maxima OX=3661 GN=LOC111494021 PE...	[more]
A0A6J1G433	1.2e-84	94.22	transmembrane protein 208 homolog OS=Cucurbita moschata OX=3662 GN=LOC111450556 ...	[more]
A0A6J1DIN6	8.3e-83	91.91	transmembrane protein 208 homolog OS=Momordica charantia OX=3673 GN=LOC111020872...	[more]

BLAST of CsaV3_2G007780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G23940.1	8.0e-70	73.99	Protein of unknown function (DUF788)	[more]
AT4G30500.1	2.3e-64	69.36	Protein of unknown function (DUF788)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008506	SRP-independent targeting protein 2/TMEM208	PFAM	PF05620	TMEM208_SND2	coord: 1..162 e-value: 2.4E-57 score: 193.4
IPR008506	SRP-independent targeting protein 2/TMEM208	PANTHER	PTHR13505	TRANSMEMBRANE PROTEIN 208	coord: 1..172
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..173
None	No IPR available	PANTHER	PTHR13505:SF8	BNAA01G06570D PROTEIN	coord: 1..172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G007780.1	CsaV3_2G007780.1	mRNA