CsaV3_2G007360 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G007360
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr2: 3718401 .. 3720392 (+)
RNA-Seq ExpressionCsaV3_2G007360
SyntenyCsaV3_2G007360
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGTATGTGAACGGTTTCCACAGAGCCACTCGTTCAGCACCAACGTAGGAACTCGTCATGAATTTGCAGTAGATGTGGCTTCTGTTCAAGCAGAACTTTTTGCCTCACATGCCAAGGTGAGTAGGCCACTTTTACAAATTACTTTCCTGATGCCAGAGGTTTGTCACAATAGAGTTGCTCTCAAAGGATTGGTCTATGACTTAAACAAAAATATAGGTTTAACTTCCCCACATTATAAATAGATGATGTGTAGAAATGCCTCATGGTAGAGTTTCTTTATTTCCTTTCGGATAGAGTCTCCTTGAAGATTGCAAATATAATGATTTTTTTGTAAAATCAAGTCATTGTAACATGCAGCGTTTAAAGTACTATAGTTCAACAAACCGAATTTGAGCGGTTAAGGCATTTATCTTAGGAGTTAATCTCTCTGCTCTCTTGCTCAAGCAATGTTTTCTTTCCAAGTTTTGGTTTCTGATCTTTTTAGAAACAGGCTCAAGAAAAGTCCAACAAATGCTTTTCAATGAGCCCAAAAGAATATCATTCAATATTGTATGAATAAAGAGATCAATCAAGCCCTAGACTAAGACCCCTAGTTAGGGAAGTATTGGGATTATTAGTATGGTTATCAGTAGTGGCATACTACTAGTAATTAGGTTGTGAGTTTGTTAGGACTTTTAGTTGTAAATAGAGGGAGTGAGTTGGGAGCAAAGGTGTGAAGTTTTTGGTAGTAATTTGTACATCGTAGTTTCTTAAATGATATGGCAATATATATTTCTATCCTTTTTGTTCTTTACTTTTCTTGGGAGCTCTTGTTAGGTGGAAACCTAACATACTAACAAGTGCAAGTGCAGTATAAAAAGTTGTCAAAGAAGAATACTTTGTTGACAGCGCGGCAGTAATTTTCATGCCATAGAGGAAAAAGCTATATAGATCAATATAGCCAAAGAACCAACCTTGAAACCTTGGTTGGGAATCTTAGGCCTTTAAATTCTTAAATTTATTGAAATTTAACTTTTAACTTTTGATAATCTACTAACCATAAGAATATGATTTATAGTCAGTATTATGTTGGTAATTCGTTAGCTAATTCATGCTCACCAATCATAAGAAAATGGTTTAGAAAAAAATTTAAAACATAAAAAAACTCAAGGTAAAAAACTCCCAAGAGTTTTCTATGATTGTAGTTACTTGCACTTGTGATTGTGTAGTTAGTATCTCTACATTTTCCATTGTGTTCCAACTGCTGTGCTGAATAATGATGAGGACTCAACACTTGGCAATTTCTGTTCAAACTAAGAATGCACACTTGGAGGCTGTTGATTTGTTCATGTCGTTTCACTTTCAAGACCCCTTCCTCACATGGGATGCCTTGTGCAATGCTCTTCTTGACTATCCTTGAGGACTTCCATTGTCAGGTGACTATCTATCCTATCTATCAATAAATGATATAGGATTAGAATTAAAAAATGGTTTCCTCCTCTATGTTGGAAGATTTAAAATAGAAAGAGGAAAGAAGGTTAGCCTTTTCCTTACCCTTTCTCATTAAAAAAGAAATGAACTAAGTTGACCTTTACTCACGAATATAAAAAAAATGTCTATAGAAGCGAGGGTGAAAAGATTACTTATCGCTTTAGTAATACTAGCATTGAGCATGAAGTTGGAAGATGAATAGAAACTTCCATATTCTTGCTTCTTTTATGTTGTTGAAAGTCATTCCTTGCGTCAAGTTGATTGAAATGAGTTCAACTTTTTTATTGCAGCCAAGACAGAAAAAGCAGTAACCACGAACGCTATAATTTTAGTGGCCAAATGTTTCATCTATCTTTTAAAGGGATTAACTCAAGATTTTGGAAGATAAGTATGTATTTATATTTTAGACAGTCTTAAACCTCAGTTTAAGATCTAAAATGTTTCTATCACGTTCGTTCTATTGAAAAGGTTGGCTGTTTCGTAAAGACGAACAAGATATCACACAATTATTATCTTAA

mRNA sequence

ATGGACGTATGTGAACGGTTTCCACAGAGCCACTCGTTCAGCACCAACGTAGGAACTCGTCATGAATTTGCAGTAGATGTGGCTTCTGTTCAAGCAGAACTTTTTGCCTCACATGCCAAGAATGCACACTTGGAGGCTGTTGATTTGTTCATGACTTCCATTGTCAGCCAAGACAGAAAAAGCAGTAACCACGAACGCTATAATTTTAGTGGCCAAATGTTTCATCTATCTTTTAAAGGGATTAACTCAAGATTTTGGAAGATAAGTTGGCTGTTTCGTAAAGACGAACAAGATATCACACAATTATTATCTTAA

Coding sequence (CDS)

ATGGACGTATGTGAACGGTTTCCACAGAGCCACTCGTTCAGCACCAACGTAGGAACTCGTCATGAATTTGCAGTAGATGTGGCTTCTGTTCAAGCAGAACTTTTTGCCTCACATGCCAAGAATGCACACTTGGAGGCTGTTGATTTGTTCATGACTTCCATTGTCAGCCAAGACAGAAAAAGCAGTAACCACGAACGCTATAATTTTAGTGGCCAAATGTTTCATCTATCTTTTAAAGGGATTAACTCAAGATTTTGGAAGATAAGTTGGCTGTTTCGTAAAGACGAACAAGATATCACACAATTATTATCTTAA

Protein sequence

MDVCERFPQSHSFSTNVGTRHEFAVDVASVQAELFASHAKNAHLEAVDLFMTSIVSQDRKSSNHERYNFSGQMFHLSFKGINSRFWKISWLFRKDEQDITQLLS*
Homology
[Close]
BLAST of CsaV3_2G007360 vs. NCBI nr
Match: KGN61032.1 (hypothetical protein Csa_021189 [Cucumis sativus])

HSP 1 Score: 213.8 bits (543), Expect = 7.3e-52
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0 

Query: 1   MDVCERFPQSHSFSTNVGTRHEFAVDVASVQAELFASHAKNAHLEAVDLFMTSIVSQDRK 60
           MDVCERFPQSHSFSTNVGTRHEFAVDVASVQAELFASHAKNAHLEAVDLFMTSIVSQDRK
Sbjct: 1   MDVCERFPQSHSFSTNVGTRHEFAVDVASVQAELFASHAKNAHLEAVDLFMTSIVSQDRK 60

Query: 61  SSNHERYNFSGQMFHLSFKGINSRFWKISWLFRKDEQDITQLLS 105
           SSNHERYNFSGQMFHLSFKGINSRFWKISWLFRKDEQDITQLLS
Sbjct: 61  SSNHERYNFSGQMFHLSFKGINSRFWKISWLFRKDEQDITQLLS 104

[Close]
BLAST of CsaV3_2G007360 vs. ExPASy TrEMBL
Match: A0A0A0LK22 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G035080 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 3.5e-52
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0 

Query: 1   MDVCERFPQSHSFSTNVGTRHEFAVDVASVQAELFASHAKNAHLEAVDLFMTSIVSQDRK 60
           MDVCERFPQSHSFSTNVGTRHEFAVDVASVQAELFASHAKNAHLEAVDLFMTSIVSQDRK
Sbjct: 1   MDVCERFPQSHSFSTNVGTRHEFAVDVASVQAELFASHAKNAHLEAVDLFMTSIVSQDRK 60

Query: 61  SSNHERYNFSGQMFHLSFKGINSRFWKISWLFRKDEQDITQLLS 105
           SSNHERYNFSGQMFHLSFKGINSRFWKISWLFRKDEQDITQLLS
Sbjct: 61  SSNHERYNFSGQMFHLSFKGINSRFWKISWLFRKDEQDITQLLS 104

The following BLAST results are available for this feature:
BLAST of CsaV3_2G007360 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61032.17.3e-52100.00hypothetical protein Csa_021189 [Cucumis sativus][more]
BLAST of CsaV3_2G007360 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G007360 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LK223.5e-52100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G035080 PE=4 SV=1[more]
BLAST of CsaV3_2G007360 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G007360.1CsaV3_2G007360.1mRNA