CsaV3_2G006920 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G006920
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr2: 3440958 .. 3441250 (+)
RNA-Seq ExpressionCsaV3_2G006920
SyntenyCsaV3_2G006920
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGTGATGGTACTGATGGATTTCCAGACAAATATTGCAGAGGAAGCTCTGATATCTGGTTTCAAGTACTTTCCATCTTCATTAACATTGTTTTTCTTTTATAACAATATTTCCTTTTATAATACTTACTCTTACTCTTTAGCAAAATTGTAGGGCTGTCATTCTCTTCAAAATCAAAGGTGGGGGAGATGGGGAATTTTTTCTTTTTCTTTTTCTTTTTGGATTTTGTTTTTCAGGATGGAGATGAAAAGGCGACACCTCACATCTTTTATAGGTTCGGTTTAGATTAA

mRNA sequence

ATGGTGGTGATGGTACTGATGGATTTCCAGACAAATATTGCAGAGGAAGCTCTGATATCTGGTTTCAACAAAATTGTAGGGCTGTCATTCTCTTCAAAATCAAAGGTGGGGGAGATGGGGAATTTTTTCTTTTTCTTTTTCTTTTTGGATTTTGTTTTTCAGGATGGAGATGAAAAGGCGACACCTCACATCTTTTATAGGTTCGGTTTAGATTAA

Coding sequence (CDS)

ATGGTGGTGATGGTACTGATGGATTTCCAGACAAATATTGCAGAGGAAGCTCTGATATCTGGTTTCAACAAAATTGTAGGGCTGTCATTCTCTTCAAAATCAAAGGTGGGGGAGATGGGGAATTTTTTCTTTTTCTTTTTCTTTTTGGATTTTGTTTTTCAGGATGGAGATGAAAAGGCGACACCTCACATCTTTTATAGGTTCGGTTTAGATTAA

Protein sequence

MVVMVLMDFQTNIAEEALISGFNKIVGLSFSSKSKVGEMGNFFFFFFFLDFVFQDGDEKATPHIFYRFGLD*
Homology
[Close]
BLAST of CsaV3_2G006920 vs. NCBI nr
Match: KGN60983.1 (hypothetical protein Csa_021168 [Cucumis sativus])

HSP 1 Score: 142.5 bits (358), Expect = 1.4e-30
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 1  MVVMVLMDFQTNIAEEALISGFNKIVGLSFSSKSKVGEMGNFFFFFFFLDFVFQDGDEKA 60
          MVVMVLMDFQTNIAEEALISGFNKIVGLSFSSKSKVGEMGNFFFFFFFLDFVFQDGDEKA
Sbjct: 1  MVVMVLMDFQTNIAEEALISGFNKIVGLSFSSKSKVGEMGNFFFFFFFLDFVFQDGDEKA 60

Query: 61 TPHIFYRFGLD 72
          TPHIFYRFGLD
Sbjct: 61 TPHIFYRFGLD 71

[Close]
BLAST of CsaV3_2G006920 vs. ExPASy TrEMBL
Match: A0A0A0LGI5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G033380 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 6.8e-31
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 1  MVVMVLMDFQTNIAEEALISGFNKIVGLSFSSKSKVGEMGNFFFFFFFLDFVFQDGDEKA 60
          MVVMVLMDFQTNIAEEALISGFNKIVGLSFSSKSKVGEMGNFFFFFFFLDFVFQDGDEKA
Sbjct: 1  MVVMVLMDFQTNIAEEALISGFNKIVGLSFSSKSKVGEMGNFFFFFFFLDFVFQDGDEKA 60

Query: 61 TPHIFYRFGLD 72
          TPHIFYRFGLD
Sbjct: 61 TPHIFYRFGLD 71

The following BLAST results are available for this feature:
BLAST of CsaV3_2G006920 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN60983.11.4e-30100.00hypothetical protein Csa_021168 [Cucumis sativus][more]
BLAST of CsaV3_2G006920 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G006920 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LGI56.8e-31100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G033380 PE=4 SV=1[more]
BLAST of CsaV3_2G006920 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G006920.1CsaV3_2G006920.1mRNA