CsaV3_2G006680 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTCTACAAATCCAAAGCATCGTCTTCTTTCTCCGTTTTAGCGAAACTGAAAATTTTCACGGAAGGTCTTCAAAAATGGCGGAAAGGACCAAGAATATAAATATTTGGCACTTGTTCATGCTGCTTAATTTTAATCTCCTGTTTCCCTTTTCATCTGGTAAACTGACTCTATTATTTGCTTCATTTCCTCCCTCGCCTCTTCTGCAACATGATCTCTATATCAGTCTTGTGTTCATGTTAGATTCATTACTAAATGTTTTCTTATTGTGTCGAATTGTAATGTATTTGGTGATATTTTTACTGATTGTGGCTGATTTCTGGAGATTACACCTGGGTTTTGCATCTAAAGAATTTTTTGACACTTCATGGGTGTAATTTTCTGGAATTTAGATTATGGTCTTTCCAATTTGTTGACTCTTTTGTTTCATATATGGTGAAATATTTTTTATTTTAAATCCCTGGAATCATCCTTCTATCAATGAGTATTACTCGATGAGTAGAGAATTTTCTTTTGTTCTATGACAAAAAAAAAACTTGTGGCAGTTTCTTCTTTCTTGTGAATCTATTGGTTGGCTTGGTTGTGTCAGTATGGATGAACTTTGGCGTTATATCTATCTGATTTCTTAGTTGAATAAATAGATTCTTTCATCATATTGAACTAAGAATTTATTGTTCAAGGTTGTACTTCCATGCGTATTTGTGATTTGGTTTACATGGAAGGTGAACATAGCTATGTAGTATTTTTCGTTGTTTTTTCCATTTTATTTACTGAATGACTTGTATCACGTTTCACATTTATAGTAAAAGTTTGGATTATGAGGAATACTAATTGACCTCTTTGTTCTTTCTGTTGCAAGTAGGATTTGTTTTTACAGAATTGTGTTTTTTTCTTGTAGGTGAATCAAACGATGTCTGTATTTCGAAAGGTGGTCGTTTCGCACCCTTCTCATTGGAAGGAAAACCTCCTAGCAAGGTTAGCAAAGTACAAGATTTGACACTTTGCCGAGTTTTCCGAAAGAGGACTTGCTGTGGTGTAGCACAAACACACCCGGCTTTGCTTTCTGTTAGGAGGCTAGCTTCAACAGGGGAAGCCAACCATGAATGCTTGCAATTATGGGAACTTCTGGAGTGCTCAATATGTGATCCACAAGTTGGTGTTCAACCCGGACCTCCTCTAATATGTGCCTCTTTCTGCGACAGAGTCTTCAAAGCTTGTTCTGATGCTTACTTTTCTGTTGATGCTAAAACGCAGGTGAGCAGATGATAATGACCTGGTGATTCTTTTATTTTATTTATTTATTTGGCTGATTTTGTGTCCTAAACAGGTTTCGAGTGTGACCAAACCATAAAAATTTTAACTGTATAAGTTTTCTAAAGCCGGTTCGCTTCTTGAAACATAGATCTTGATACTCATCTTAGAATGAAAAAGAAAAATAGTGTCTCATTACTAGTAAAACTTTGGTTTAGTTATAAATTTAGTCTCTAAGCACAAAGAAGGTGTATTTAATTCTTGAATGTAAGATTATGCTTCTATTTAGTATTTGCTATGAAGGTCGTCAACAAAACATTAATATGACATACGACAGACTATAGTACATCGTAAAAAGCATGAATAAAGATGTGATACATGGATACAACATGATATGAACACAGAACACGTCATTTCTTCCCAATCTAGAACAATTTGACTAGGACACATTTTTAATAATATATATCATCTGTATACTGTATGAAATTTATTTTATGCATAAAAAGTGAGTTTGATGTATTTTTCACATTCAATATTTATTATTTTGTTCTATATTATTATGAGCCAATTTAGTGTATGTGTTCTATATATGCCTACAAATGTTGCATTAAAATTTAAATTGACTTTGTACAACTAGTGTCAAACGCGTATCTATTGTGCTACTAAGTGTCCAATAAGCATGAAACATGTGTTGAAGTGTCCAAGTCCAACATGTGTTGTACTTGGACATGTAAGTCAAACTTAAGCTTTTGTGTTTCTTAGAGCACATCAAAACTAAAGTGTTCTTGTTTCTTAGAGCATATCATTCCAACTCAAGGAAGAGTTTATATGATGAGCATGCGGTATTAGAATTTCACTAACATTATTAACTTAAGGACATTATAAACACAATGTTCAAAGTTGAGAAATACTTTAGCCTTGTAAATTTTAAATTTGTTATGCCGGGTTATTTTTGCTGTAATTTATGATACAATTGGAACTTCATTAAAATTATATTAGTTTGTTTCTTCCATTTTTCCACATGCATGATGTGCTTTCAACCAACACAATGAGAAGTAAAAGCATAATCTTGAACCTTGGCCACCACGTGAGATTAAATATACTTCCTGATTAGACTTTATGATTCAGGTTCTAGCACCCTGCGGAGTGAATGACTTTGTGTGTGGCAGGGCTTCCGAGTGGGTCTCAAATGGTACAGACCTTTGCAACGCTGCAGGTTTTACAATTAAGATCTCTGATGAAGAATCCTCTTGCTATGGTAGTAAAGCCAGACTAGACTCCATTGCTAATTCATGGAAGACTTCACCATCAGTAATGTCATCCCAAAGAACAGGTTACTTGGGCATCTTGGAGGATTTCCAGCAATGGGTAAAAGAAATGAGTTTTCATGAACAGGTTTCGTGGCTGATCGGGTCCATGGTGCTTTCAGCAGGGCTTCTGTTTGCAAGGTTGGGGAAGCTAAACATTTTCATTACATGGTCTTTTATTTTACAACTCTTGAGAGAGAAAAAACTGTCCTCCATTCTTATAAGTTTCTCGATGGCTATGCTTTAGGTTTTACCTTCTATAAGACGGGAACCGGTCATTTAATGTGTAAAACTCGAAGTGTAGTTAGAAATATAAAAAGAACTTGCTTATGTTCATACTCGATCAAGTTAAATGTTAAAACCATGTAGTGCTTGATGTTGAAGACTCAAAATGTTCTAATATTTTTTTCCTTGTGTTTCATCTGTTATATTTTTATGCTGTTTTTAATTCAGCAAAAGGCAAAGCCATAGCCAGCGCCAGAAATATGCTGCCATTCAACGAGCAACGAAGAAAATTGAAGTGACCATGAATCAAAATTCTCTTGCTACCCAAGGAATCAGGAAAGGAAGTAGAAGATGACCTGATACCTTACATCTAAAGACATTTTGTTTGGCCTATTTCTGAGGTAAAGCTATACCTCTTTTCTATCAACTATCTGACCTCTTAATGCTTTTCTCAATCTGCCTCTTCGTCGTACTCTTTTCCTCTCACTTTTATATTCATTGAAGTTCACTTTTGCAGAAAAATTGACTCTGTTCTCCAACAGTTCTGATGCTTGAAAAGTGGCACCCATGGTTGTTCTTCCATTTCAATGAAATATAGAAGACTAAAAAAAATGAGTTATGATGTAGCTGTACAATTGTAGGAAGTACTGGACATTGTGATAATTACTATTGAATTGTGTATTTAAGATAAATCTCTTGTCAAAATCAGCCATATTCAGTTTTATCCTTTTGTAGAGAGGGATTTTGCTCATAGATTAATTTTTGGTGAGAATAACAGTTTGTTGATGTGTACTGAACTGATGAAGCAGCTTTCATTAACTTGATAATTTTTTTAACTTTTACATGTGTACCAAACTGTAATGAAATCTGATGTAATTGTAACTATTGACAGATCAACGATAATGAGCTTAAATCACAAACGTAATTTGATTGTTTT ATGGCGGAAAGGACCAAGAATATAAATATTTGGCACTTGTTCATGCTGCTTAATTTTAATCTCCTGTTTCCCTTTTCATCTGGTGAATCAAACGATGTCTGTATTTCGAAAGGTGGTCGTTTCGCACCCTTCTCATTGGAAGGAAAACCTCCTAGCAAGGTTAGCAAAGTACAAGATTTGACACTTTGCCGAGTTTTCCGAAAGAGGACTTGCTGTGGTGTAGCACAAACACACCCGGCTTTGCTTTCTGTTAGGAGGCTAGCTTCAACAGGGGAAGCCAACCATGAATGCTTGCAATTATGGGAACTTCTGGAGTGCTCAATATGTGATCCACAAGTTGGTGTTCAACCCGGACCTCCTCTAATATGTGCCTCTTTCTGCGACAGAGTCTTCAAAGCTTGTTCTGATGCTTACTTTTCTGTTGATGCTAAAACGCAGGTTCTAGCACCCTGCGGAGTGAATGACTTTGTGTGTGGCAGGGCTTCCGAGTGGGTCTCAAATGGTACAGACCTTTGCAACGCTGCAGGTTTTACAATTAAGATCTCTGATGAAGAATCCTCTTGCTATGGTAGTAAAGCCAGACTAGACTCCATTGCTAATTCATGGAAGACTTCACCATCAGTAATGTCATCCCAAAGAACAGGTTACTTGGGCATCTTGGAGGATTTCCAGCAATGGGTAAAAGAAATGAGTTTTCATGAACAGGTTTCGTGGCTGATCGGGTCCATGGTGCTTTCAGCAGGGCTTCTGTTTGCAAGCAAAAGGCAAAGCCATAGCCAGCGCCAGAAATATGCTGCCATTCAACGAGCAACGAAGAAAATTGAAGTGACCATGAATCAAAATTCTCTTGCTACCCAAGGAATCAGGAAAGGAAGTAGAAGATGA ATGGCGGAAAGGACCAAGAATATAAATATTTGGCACTTGTTCATGCTGCTTAATTTTAATCTCCTGTTTCCCTTTTCATCTGGTGAATCAAACGATGTCTGTATTTCGAAAGGTGGTCGTTTCGCACCCTTCTCATTGGAAGGAAAACCTCCTAGCAAGGTTAGCAAAGTACAAGATTTGACACTTTGCCGAGTTTTCCGAAAGAGGACTTGCTGTGGTGTAGCACAAACACACCCGGCTTTGCTTTCTGTTAGGAGGCTAGCTTCAACAGGGGAAGCCAACCATGAATGCTTGCAATTATGGGAACTTCTGGAGTGCTCAATATGTGATCCACAAGTTGGTGTTCAACCCGGACCTCCTCTAATATGTGCCTCTTTCTGCGACAGAGTCTTCAAAGCTTGTTCTGATGCTTACTTTTCTGTTGATGCTAAAACGCAGGTTCTAGCACCCTGCGGAGTGAATGACTTTGTGTGTGGCAGGGCTTCCGAGTGGGTCTCAAATGGTACAGACCTTTGCAACGCTGCAGGTTTTACAATTAAGATCTCTGATGAAGAATCCTCTTGCTATGGTAGTAAAGCCAGACTAGACTCCATTGCTAATTCATGGAAGACTTCACCATCAGTAATGTCATCCCAAAGAACAGGTTACTTGGGCATCTTGGAGGATTTCCAGCAATGGGTAAAAGAAATGAGTTTTCATGAACAGGTTTCGTGGCTGATCGGGTCCATGGTGCTTTCAGCAGGGCTTCTGTTTGCAAGCAAAAGGCAAAGCCATAGCCAGCGCCAGAAATATGCTGCCATTCAACGAGCAACGAAGAAAATTGAAGTGACCATGAATCAAAATTCTCTTGCTACCCAAGGAATCAGGAAAGGAAGTAGAAGATGA MAERTKNINIWHLFMLLNFNLLFPFSSGESNDVCISKGGRFAPFSLEGKPPSKVSKVQDLTLCRVFRKRTCCGVAQTHPALLSVRRLASTGEANHECLQLWELLECSICDPQVGVQPGPPLICASFCDRVFKACSDAYFSVDAKTQVLAPCGVNDFVCGRASEWVSNGTDLCNAAGFTIKISDEESSCYGSKARLDSIANSWKTSPSVMSSQRTGYLGILEDFQQWVKEMSFHEQVSWLIGSMVLSAGLLFASKRQSHSQRQKYAAIQRATKKIEVTMNQNSLATQGIRKGSRR* Homology
BLAST of CsaV3_2G006680 vs. NCBI nr
Match: XP_004144778.1 (uncharacterized protein LOC101210852 [Cucumis sativus] >XP_011648843.1 uncharacterized protein LOC101210852 [Cucumis sativus] >KAE8651616.1 hypothetical protein Csa_021298 [Cucumis sativus]) HSP 1 Score: 600.9 bits (1548), Expect = 5.9e-168 Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0
BLAST of CsaV3_2G006680 vs. NCBI nr
Match: XP_008454094.1 (PREDICTED: uncharacterized protein LOC103494607 [Cucumis melo] >XP_008454104.1 PREDICTED: uncharacterized protein LOC103494607 [Cucumis melo]) HSP 1 Score: 574.7 bits (1480), Expect = 4.6e-160 Identity = 278/294 (94.56%), Postives = 286/294 (97.28%), Query Frame = 0
BLAST of CsaV3_2G006680 vs. NCBI nr
Match: XP_038877718.1 (uncharacterized protein LOC120069948 [Benincasa hispida]) HSP 1 Score: 553.5 bits (1425), Expect = 1.1e-153 Identity = 267/294 (90.82%), Postives = 283/294 (96.26%), Query Frame = 0
BLAST of CsaV3_2G006680 vs. NCBI nr
Match: XP_022946915.1 (uncharacterized protein LOC111450855 [Cucurbita moschata] >XP_022946916.1 uncharacterized protein LOC111450855 [Cucurbita moschata]) HSP 1 Score: 543.5 bits (1399), Expect = 1.1e-150 Identity = 262/294 (89.12%), Postives = 277/294 (94.22%), Query Frame = 0
BLAST of CsaV3_2G006680 vs. NCBI nr
Match: XP_023545311.1 (uncharacterized protein LOC111804755 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 543.5 bits (1399), Expect = 1.1e-150 Identity = 262/294 (89.12%), Postives = 277/294 (94.22%), Query Frame = 0
BLAST of CsaV3_2G006680 vs. ExPASy TrEMBL
Match: A0A0A0LIV4 (Folate_rec domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G031180 PE=4 SV=1) HSP 1 Score: 600.9 bits (1548), Expect = 2.9e-168 Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0
BLAST of CsaV3_2G006680 vs. ExPASy TrEMBL
Match: A0A1S3BYL2 (uncharacterized protein LOC103494607 OS=Cucumis melo OX=3656 GN=LOC103494607 PE=4 SV=1) HSP 1 Score: 574.7 bits (1480), Expect = 2.2e-160 Identity = 278/294 (94.56%), Postives = 286/294 (97.28%), Query Frame = 0
BLAST of CsaV3_2G006680 vs. ExPASy TrEMBL
Match: A0A6J1G4X5 (uncharacterized protein LOC111450855 OS=Cucurbita moschata OX=3662 GN=LOC111450855 PE=4 SV=1) HSP 1 Score: 543.5 bits (1399), Expect = 5.4e-151 Identity = 262/294 (89.12%), Postives = 277/294 (94.22%), Query Frame = 0
BLAST of CsaV3_2G006680 vs. ExPASy TrEMBL
Match: A0A6J1K9P6 (uncharacterized protein LOC111493544 OS=Cucurbita maxima OX=3661 GN=LOC111493544 PE=4 SV=1) HSP 1 Score: 542.0 bits (1395), Expect = 1.6e-150 Identity = 261/294 (88.78%), Postives = 277/294 (94.22%), Query Frame = 0
BLAST of CsaV3_2G006680 vs. ExPASy TrEMBL
Match: A0A5D3CRH7 (Hedgehog-interacting protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00500 PE=4 SV=1) HSP 1 Score: 526.2 bits (1354), Expect = 9.0e-146 Identity = 254/267 (95.13%), Postives = 261/267 (97.75%), Query Frame = 0
BLAST of CsaV3_2G006680 vs. TAIR 10
Match: AT5G27830.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Folate receptor, conserved region (InterPro:IPR018143); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 275.0 bits (702), Expect = 6.9e-74 Identity = 139/285 (48.77%), Postives = 190/285 (66.67%), Query Frame = 0
BLAST of CsaV3_2G006680 vs. TAIR 10
Match: AT5G27830.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Folate receptor, conserved region (InterPro:IPR018143); Has 79 Blast hits to 79 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). ) HSP 1 Score: 271.6 bits (693), Expect = 7.7e-73 Identity = 133/264 (50.38%), Postives = 181/264 (68.56%), Query Frame = 0
BLAST of CsaV3_2G006680 vs. TAIR 10
Match: AT5G27830.5 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Folate receptor, conserved region (InterPro:IPR018143). ) HSP 1 Score: 271.2 bits (692), Expect = 1.0e-72 Identity = 143/288 (49.65%), Postives = 193/288 (67.01%), Query Frame = 0
BLAST of CsaV3_2G006680 vs. TAIR 10
Match: AT5G27830.4 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Folate receptor, conserved region (InterPro:IPR018143). ) HSP 1 Score: 267.7 bits (683), Expect = 1.1e-71 Identity = 137/267 (51.31%), Postives = 184/267 (68.91%), Query Frame = 0
BLAST of CsaV3_2G006680 vs. TAIR 10
Match: AT5G27830.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Folate receptor, conserved region (InterPro:IPR018143); Has 58 Blast hits to 58 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). ) HSP 1 Score: 226.5 bits (576), Expect = 2.8e-59 Identity = 122/284 (42.96%), Postives = 168/284 (59.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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