CsaV3_2G006570 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTAATCGATTATAGAGTATTAGATCTAAACATCACCAGCGCCGAAGGAATCAAAGGTGTTCTAAGTTTCACCAATTTTTTCTTCAAATCAAAAGTCTACGCCGCGGTCTCCGTCGACGGAACCCCTTCAGCCACCCAAGAAACGCCGCTGGCTAAATACTTCGGCAAAAATCCAGTGTGGAATTGTTCGATGAGGTTCCATTTGGAGGAATCGAAGCTACAAGAAAATGCACTGACTCTGAAGATTAAACTAAAGCGAAGGCGAACATTCGGAAGAGATGATGAAGACATTGCTGAAGCTTCGATTCCGTTGAGAAATCTGTTTAATGGCAATGAGAATGTAACAAATGAAAATTGCAGTTCCTCTTTTATGCTATCGAAGTCCGGCGGCCTGCGTGGTTTGGTGTATTTTTCGTATTGTTTCAGCAGGACTTACAATGCATCCGATGCCAGTGACGATGGTGCCACAGTTGCTCCGCCCTTGGCCTTCGAACGTCCCCCTCTTGCACACCGCAGTGATCTTAGTTGCGGGGTTTTTGATTTGTTATTCCATTAA ATGCTAATCGATTATAGAGTATTAGATCTAAACATCACCAGCGCCGAAGGAATCAAAGGTGTTCTAAGTTTCACCAATTTTTTCTTCAAATCAAAAGTCTACGCCGCGGTCTCCGTCGACGGAACCCCTTCAGCCACCCAAGAAACGCCGCTGGCTAAATACTTCGGCAAAAATCCAGTGTGGAATTGTTCGATGAGGTTCCATTTGGAGGAATCGAAGCTACAAGAAAATGCACTGACTCTGAAGATTAAACTAAAGCGAAGGCGAACATTCGGAAGAGATGATGAAGACATTGCTGAAGCTTCGATTCCGTTGAGAAATCTGTTTAATGGCAATGAGAATGTAACAAATGAAAATTGCAGTTCCTCTTTTATGCTATCGAAGTCCGGCGGCCTGCGTGGTTTGGTGTATTTTTCGTATTGTTTCAGCAGGACTTACAATGCATCCGATGCCAGTGACGATGGTGCCACAGTTGCTCCGCCCTTGGCCTTCGAACGTCCCCCTCTTGCACACCGCAGTGATCTTAGTTGCGGGGTTTTTGATTTGTTATTCCATTAA ATGCTAATCGATTATAGAGTATTAGATCTAAACATCACCAGCGCCGAAGGAATCAAAGGTGTTCTAAGTTTCACCAATTTTTTCTTCAAATCAAAAGTCTACGCCGCGGTCTCCGTCGACGGAACCCCTTCAGCCACCCAAGAAACGCCGCTGGCTAAATACTTCGGCAAAAATCCAGTGTGGAATTGTTCGATGAGGTTCCATTTGGAGGAATCGAAGCTACAAGAAAATGCACTGACTCTGAAGATTAAACTAAAGCGAAGGCGAACATTCGGAAGAGATGATGAAGACATTGCTGAAGCTTCGATTCCGTTGAGAAATCTGTTTAATGGCAATGAGAATGTAACAAATGAAAATTGCAGTTCCTCTTTTATGCTATCGAAGTCCGGCGGCCTGCGTGGTTTGGTGTATTTTTCGTATTGTTTCAGCAGGACTTACAATGCATCCGATGCCAGTGACGATGGTGCCACAGTTGCTCCGCCCTTGGCCTTCGAACGTCCCCCTCTTGCACACCGCAGTGATCTTAGTTGCGGGGTTTTTGATTTGTTATTCCATTAA MLIDYRVLDLNITSAEGIKGVLSFTNFFFKSKVYAAVSVDGTPSATQETPLAKYFGKNPVWNCSMRFHLEESKLQENALTLKIKLKRRRTFGRDDEDIAEASIPLRNLFNGNENVTNENCSSSFMLSKSGGLRGLVYFSYCFSRTYNASDASDDGATVAPPLAFERPPLAHRSDLSCGVFDLLFH* Homology
BLAST of CsaV3_2G006570 vs. NCBI nr
Match: XP_031736682.1 (protein SRC2 homolog [Cucumis sativus] >KGN60949.1 hypothetical protein Csa_021167 [Cucumis sativus]) HSP 1 Score: 376.3 bits (965), Expect = 1.5e-100 Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0
BLAST of CsaV3_2G006570 vs. NCBI nr
Match: XP_022938307.1 (protein SRC2 [Cucurbita moschata] >KAG7021095.1 Protein SRC2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 206.5 bits (524), Expect = 2.1e-49 Identity = 105/163 (64.42%), Postives = 129/163 (79.14%), Query Frame = 0
BLAST of CsaV3_2G006570 vs. NCBI nr
Match: KAG6586252.1 (Protein SRC2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 205.7 bits (522), Expect = 3.5e-49 Identity = 104/158 (65.82%), Postives = 126/158 (79.75%), Query Frame = 0
BLAST of CsaV3_2G006570 vs. NCBI nr
Match: XP_022150754.1 (protein SRC2 [Momordica charantia]) HSP 1 Score: 181.8 bits (460), Expect = 5.4e-42 Identity = 97/164 (59.15%), Postives = 119/164 (72.56%), Query Frame = 0
BLAST of CsaV3_2G006570 vs. NCBI nr
Match: KAA0048022.1 (protein SRC2-like [Cucumis melo var. makuwa]) HSP 1 Score: 136.0 bits (341), Expect = 3.4e-28 Identity = 69/85 (81.18%), Postives = 74/85 (87.06%), Query Frame = 0
BLAST of CsaV3_2G006570 vs. ExPASy Swiss-Prot
Match: O04133 (Protein SRC2 OS=Glycine max OX=3847 GN=SRC2 PE=2 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 9.1e-16 Identity = 62/171 (36.26%), Postives = 88/171 (51.46%), Query Frame = 0
BLAST of CsaV3_2G006570 vs. ExPASy TrEMBL
Match: A0A0A0LIU2 (C2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G030590 PE=4 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 7.3e-101 Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0
BLAST of CsaV3_2G006570 vs. ExPASy TrEMBL
Match: A0A6J1FDP3 (protein SRC2 OS=Cucurbita moschata OX=3662 GN=LOC111444443 PE=4 SV=1) HSP 1 Score: 206.5 bits (524), Expect = 9.9e-50 Identity = 105/163 (64.42%), Postives = 129/163 (79.14%), Query Frame = 0
BLAST of CsaV3_2G006570 vs. ExPASy TrEMBL
Match: A0A6J1DB07 (protein SRC2 OS=Momordica charantia OX=3673 GN=LOC111018814 PE=4 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.6e-42 Identity = 97/164 (59.15%), Postives = 119/164 (72.56%), Query Frame = 0
BLAST of CsaV3_2G006570 vs. ExPASy TrEMBL
Match: A0A5A7TWY8 (Protein SRC2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00900 PE=4 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 1.7e-28 Identity = 69/85 (81.18%), Postives = 74/85 (87.06%), Query Frame = 0
BLAST of CsaV3_2G006570 vs. ExPASy TrEMBL
Match: A0A2P5CFS7 (C2 domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_156220 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 9.7e-21 Identity = 62/154 (40.26%), Postives = 102/154 (66.23%), Query Frame = 0
BLAST of CsaV3_2G006570 vs. TAIR 10
Match: AT4G15755.1 (Calcium-dependent lipid-binding (CaLB domain) family protein ) HSP 1 Score: 60.1 bits (144), Expect = 2.2e-09 Identity = 52/183 (28.42%), Postives = 86/183 (46.99%), Query Frame = 0
BLAST of CsaV3_2G006570 vs. TAIR 10
Match: AT3G16510.1 (Calcium-dependent lipid-binding (CaLB domain) family protein ) HSP 1 Score: 59.3 bits (142), Expect = 3.8e-09 Identity = 42/145 (28.97%), Postives = 71/145 (48.97%), Query Frame = 0
BLAST of CsaV3_2G006570 vs. TAIR 10
Match: AT4G15740.1 (Calcium-dependent lipid-binding (CaLB domain) family protein ) HSP 1 Score: 49.3 bits (116), Expect = 3.9e-06 Identity = 31/108 (28.70%), Postives = 55/108 (50.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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