CsaV3_2G006400 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G006400
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr2: 3014909 .. 3015225 (+)
RNA-Seq ExpressionCsaV3_2G006400
SyntenyCsaV3_2G006400
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGGATGATGAGAAAATGTTCGGGAATGAAAATAGCATTAAAGAAAGCAAAAAATAGAGAGAAAAAAAAGTGTAGAATAACGATTGATATTTTGTGCTAAATATATTTAAAATAGCGTCCAGACGCCACGACACTCAAGCTTATGCACACGCATCACATCTGCCTCAAATGTTCAGAACGTCGCAGCGCTTGGCCAATTATGCAAGTTAGGACCCTTCTGCCTTACAGCACCGCTCGAGTCGTCGTGGGGCAAATACAAGGTGGAAGCCTTTTTTACTTCTTTAGCTCATACAAACACCTCCGTTTGCTCTTGA

mRNA sequence

ATGTCGGATGATGAGAAAATCGTCCAGACGCCACGACACTCAAGCTTATGCACACGCATCACATCTGCCTCAAATGTTCAGAACGTCGCAGCGCTTGGCCAATTATGCAAGTTAGGACCCTTCTGCCTTACAGCACCGCTCGAGTCGTCGTGGGGCAAATACAAGGTGGAAGCCTTTTTTACTTCTTTAGCTCATACAAACACCTCCGTTTGCTCTTGA

Coding sequence (CDS)

ATGTCGGATGATGAGAAAATCGTCCAGACGCCACGACACTCAAGCTTATGCACACGCATCACATCTGCCTCAAATGTTCAGAACGTCGCAGCGCTTGGCCAATTATGCAAGTTAGGACCCTTCTGCCTTACAGCACCGCTCGAGTCGTCGTGGGGCAAATACAAGGTGGAAGCCTTTTTTACTTCTTTAGCTCATACAAACACCTCCGTTTGCTCTTGA

Protein sequence

MSDDEKIVQTPRHSSLCTRITSASNVQNVAALGQLCKLGPFCLTAPLESSWGKYKVEAFFTSLAHTNTSVCS*
Homology
[Close]
BLAST of CsaV3_2G006400 vs. NCBI nr
Match: KGN60926.1 (hypothetical protein Csa_021150 [Cucumis sativus])

HSP 1 Score: 149.8 bits (377), Expect = 9.0e-33
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0 

Query: 1  MSDDEKIVQTPRHSSLCTRITSASNVQNVAALGQLCKLGPFCLTAPLESSWGKYKVEAFF 60
          MSDDEKIVQTPRHSSLCTRITSASNVQNVAALGQLCKLGPFCLTAPLESSWGKYKVEAFF
Sbjct: 1  MSDDEKIVQTPRHSSLCTRITSASNVQNVAALGQLCKLGPFCLTAPLESSWGKYKVEAFF 60

Query: 61 TSLAHTNTSVCS 73
          TSLAHTNTSVCS
Sbjct: 61 TSLAHTNTSVCS 72

[Close]
BLAST of CsaV3_2G006400 vs. ExPASy TrEMBL
Match: A0A0A0LLT0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G023930 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 4.3e-33
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0 

Query: 1  MSDDEKIVQTPRHSSLCTRITSASNVQNVAALGQLCKLGPFCLTAPLESSWGKYKVEAFF 60
          MSDDEKIVQTPRHSSLCTRITSASNVQNVAALGQLCKLGPFCLTAPLESSWGKYKVEAFF
Sbjct: 1  MSDDEKIVQTPRHSSLCTRITSASNVQNVAALGQLCKLGPFCLTAPLESSWGKYKVEAFF 60

Query: 61 TSLAHTNTSVCS 73
          TSLAHTNTSVCS
Sbjct: 61 TSLAHTNTSVCS 72

The following BLAST results are available for this feature:
BLAST of CsaV3_2G006400 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN60926.19.0e-33100.00hypothetical protein Csa_021150 [Cucumis sativus][more]
BLAST of CsaV3_2G006400 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G006400 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LLT04.3e-33100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G023930 PE=4 SV=1[more]
BLAST of CsaV3_2G006400 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G006400.1CsaV3_2G006400.1mRNA