CsaV3_2G005040 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_2G005040
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	TIR-NBS-LRR disease resistance protein
Location	chr2: 2727485 .. 2728495 (-)
RNA-Seq Expression	CsaV3_2G005040
Synteny	CsaV3_2G005040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGACAGAGAGGAAGGTTGTTGGAATCAAGATGCCACCAAAAATATGACAGACAAAATGGAAGAAAATGAGAAACAGAGAGAGGTCTCCAAGGTATTGATAAGGTATTCACTTATATATCTTCTACTTTTCCATTCCTCAATATGGATAGAGCAAGTGGATCATCTTCTTCCTCATGTTTTAGATGGACTTTTGATGTCTTTTTAAGCTTTCGAGGGGAAGATACTCGATCCAACTTCACCAGTCATCTTAATATGGCTTTGCGTCAAAGAGGAATCAATGTTTTTATAGATAACAGGATTTCAAGGGGTCAAGAAATTTCTGCATCTCTTTTCGAAGCTATTGAAGAATCCAAGATCTCCATCGTTATTATCTCCCAAAATTATGCATCTTCCAGTTGGTGTTTGAATGAATTGGTGAAAATCATTATGTGTAAGGAATTGAGAGGACAAGTTGTTTTACCAATTTTTTACAAAGTGAATCCATCTCAAGTACGGAAACAAAATGGAGCATTTGGAGAAGCATTTGCCGAACTTGAAGTTAGATTCTTTGACAAGATGCAAGCATGGGGAGAGGCTTTGACTGCTGTTTCCCATATGTCTGGATGGGTGGTTCTTGAGAAAGAGTATTTTTTTTTTTCTTTTTCATATCCTTCTACTCTTTTTTCTATTCAAATTGTAATTTTACTATTTTTTTTTTTTAAGGAGATCATGCTTTGGTGTAAAGGAAAAAGGAAATTTGAAAACTTGATATTTACATCTGATTTGATAACATTTTCAGTTTGTACGCTTTTGTGCTTTATGAACTTTTATATGGCTGTTAATCATCCATTTTTTCAATTTTTGTTAAAAGAAACACTTGAAATTCTAATTGACTTCTAAAAACAAAAGCAATTTTTTAGAACTTATTTTTTTTAGTTACCAAGAGGACTACTTTTAAATATACCAAAATAAACAAAAATATTTACAAATTTAGAAAACATCATATTGATAGATGTTAATTGACATTGAAA

mRNA sequence

ATGGATAGAGCAAGTGGATCATCTTCTTCCTCATGTTTTAGATGGACTTTTGATGTCTTTTTAAGCTTTCGAGGGGAAGATACTCGATCCAACTTCACCAGTCATCTTAATATGGCTTTGCGTCAAAGAGGAATCAATGTTTTTATAGATAACAGGATTTCAAGGGGTCAAGAAATTTCTGCATCTCTTTTCGAAGCTATTGAAGAATCCAAGATCTCCATCGTTATTATCTCCCAAAATTATGCATCTTCCAGTTGGTGTTTGAATGAATTGGTGAAAATCATTATGTGTAAGGAATTGAGAGGACAAGTTGTTTTACCAATTTTTTACAAAGTGAATCCATCTCAAGTACGGAAACAAAATGGAGCATTTGGAGAAGCATTTGCCGAACTTGAAGTTAGATTCTTTGACAAGATGCAAGCATGGGGAGAGGCTTTGACTGCTGTTTCCCATATGTCTGGATGGGTGGTTCTTGAGAAAGAGTATTTTTTTTTTTCTTTTTCATATCCTTCTACTCTTTTTTCTATTCAAATTGTAATTTTACTATTTTTTTTTTTTAAGGAGATCATGCTTTGGTGTAAAGGAAAAAGGAAATTTGAAAACTTGATATTTACATCTGATTTGATAACATTTTCAGTTTGTACGCTTTTGTGCTTTATGAACTTTTATATGGCTGTTAATCATCCATTTTTTCAATTTTTGTTAAAAGAAACACTTGAAATTCTAATTGACTTCTAA

Coding sequence (CDS)

ATGGATAGAGCAAGTGGATCATCTTCTTCCTCATGTTTTAGATGGACTTTTGATGTCTTTTTAAGCTTTCGAGGGGAAGATACTCGATCCAACTTCACCAGTCATCTTAATATGGCTTTGCGTCAAAGAGGAATCAATGTTTTTATAGATAACAGGATTTCAAGGGGTCAAGAAATTTCTGCATCTCTTTTCGAAGCTATTGAAGAATCCAAGATCTCCATCGTTATTATCTCCCAAAATTATGCATCTTCCAGTTGGTGTTTGAATGAATTGGTGAAAATCATTATGTGTAAGGAATTGAGAGGACAAGTTGTTTTACCAATTTTTTACAAAGTGAATCCATCTCAAGTACGGAAACAAAATGGAGCATTTGGAGAAGCATTTGCCGAACTTGAAGTTAGATTCTTTGACAAGATGCAAGCATGGGGAGAGGCTTTGACTGCTGTTTCCCATATGTCTGGATGGGTGGTTCTTGAGAAAGAGTATTTTTTTTTTTCTTTTTCATATCCTTCTACTCTTTTTTCTATTCAAATTGTAATTTTACTATTTTTTTTTTTTAAGGAGATCATGCTTTGGTGTAAAGGAAAAAGGAAATTTGAAAACTTGATATTTACATCTGATTTGATAACATTTTCAGTTTGTACGCTTTTGTGCTTTATGAACTTTTATATGGCTGTTAATCATCCATTTTTTCAATTTTTGTTAAAAGAAACACTTGAAATTCTAATTGACTTCTAA

Protein sequence

MDRASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEISASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQNGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGWVVLEKEYFFFSFSYPSTLFSIQIVILLFFFFKEIMLWCKGKRKFENLIFTSDLITFSVCTLLCFMNFYMAVNHPFFQFLLKETLEILIDF*

Homology

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BLAST of CsaV3_2G005040 vs. NCBI nr
Match: KAE8651589.1 (hypothetical protein Csa_023433 [Cucumis sativus])

HSP 1 Score: 482.3 bits (1240), Expect = 2.6e-132
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0


Query: 1   MDRASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEIS 60
           MDRASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEIS
Sbjct: 1   MDRASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEIS 60

Query: 61  ASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQ 120
           ASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQ
Sbjct: 61  ASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQ 120

Query: 121 NGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGWVVLEKEYFFFSFSYPSTLFSIQIVI 180
           NGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGWVVLEKEYFFFSFSYPSTLFSIQIVI
Sbjct: 121 NGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGWVVLEKEYFFFSFSYPSTLFSIQIVI 180

Query: 181 LLFFFFKEIMLWCKGKRKFENLIFTSDLITFSVCTLLCFMNFYMAVNHPFFQFLLKETLE 240
           LLFFFFKEIMLWCKGKRKFENLIFTSDLITFSVCTLLCFMNFYMAVNHPFFQFLLKETLE
Sbjct: 181 LLFFFFKEIMLWCKGKRKFENLIFTSDLITFSVCTLLCFMNFYMAVNHPFFQFLLKETLE 240

Query: 241 ILIDF 246
           ILIDF
Sbjct: 241 ILIDF 245

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BLAST of CsaV3_2G005040 vs. NCBI nr
Match: XP_031737216.1 (TMV resistance protein N isoform X3 [Cucumis sativus])

HSP 1 Score: 318.5 bits (815), Expect = 4.9e-83
Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MDRASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEIS 60
           MDRASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEIS
Sbjct: 1   MDRASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEIS 60

Query: 61  ASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQ 120
           ASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQ
Sbjct: 61  ASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQ 120

Query: 121 NGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGWVVLEKE 162
           NGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGWVVLEK+
Sbjct: 121 NGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGWVVLEKD 161

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BLAST of CsaV3_2G005040 vs. NCBI nr
Match: XP_011648801.1 (TMV resistance protein N isoform X2 [Cucumis sativus])

HSP 1 Score: 318.5 bits (815), Expect = 4.9e-83
Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MDRASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEIS 60
           MDRASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEIS
Sbjct: 1   MDRASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEIS 60

Query: 61  ASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQ 120
           ASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQ
Sbjct: 61  ASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQ 120

Query: 121 NGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGWVVLEKE 162
           NGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGWVVLEK+
Sbjct: 121 NGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGWVVLEKD 161

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BLAST of CsaV3_2G005040 vs. NCBI nr
Match: XP_031737215.1 (TMV resistance protein N isoform X1 [Cucumis sativus])

HSP 1 Score: 318.5 bits (815), Expect = 4.9e-83
Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MDRASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEIS 60
           MDRASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEIS
Sbjct: 1   MDRASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEIS 60

Query: 61  ASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQ 120
           ASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQ
Sbjct: 61  ASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQ 120

Query: 121 NGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGWVVLEKE 162
           NGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGWVVLEK+
Sbjct: 121 NGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGWVVLEKD 161

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BLAST of CsaV3_2G005040 vs. NCBI nr
Match: ADI99937.1 (TIR-NBS-LRR-AAA+ATPase class resistance protein [Cucumis sativus])

HSP 1 Score: 278.9 bits (712), Expect = 4.3e-71
Identity = 140/143 (97.90%), Postives = 142/143 (99.30%), Query Frame = 0


Query: 19  VFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEISASLFEAIEESKISIVIIS 78
           V +SFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEISASLFEAIEESKISIVIIS
Sbjct: 17  VLISFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEISASLFEAIEESKISIVIIS 76

Query: 79  QNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQNGAFGEAFAELEVRFFDK 138
           QNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQNGAFGEAFAELEVRFFDK
Sbjct: 77  QNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQNGAFGEAFAELEVRFFDK 136

Query: 139 MQAWGEALTAVSHMSGWVVLEKE 162
           MQAWGEALTAVSHMSGWVVLEK+
Sbjct: 137 MQAWGEALTAVSHMSGWVVLEKD 159

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BLAST of CsaV3_2G005040 vs. ExPASy Swiss-Prot
Match: V9M2S5 (Disease resistance protein RPV1 OS=Vitis rotundifolia OX=103349 GN=RPV1 PE=1 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 7.4e-42
Identity = 88/162 (54.32%), Postives = 114/162 (70.37%), Query Frame = 0


Query: 3   RASGSSSSSCF--RWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEIS 62
           RAS SSS+       T+DVFLSFRGEDTR NFT HL  AL +RGI  F D+R+ RG+ I+
Sbjct: 8   RASSSSSTPSIPRTTTYDVFLSFRGEDTRYNFTDHLYSALGRRGIRTFRDDRLRRGEAIA 67

Query: 63  ASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQ 122
             L +AIEES+ S+++ S+NYA S WCL+ELVKI+ C++  G  V PIFY V+PS VRKQ
Sbjct: 68  PELLKAIEESRSSVIVFSENYAHSRWCLDELVKIMECQKDLGHAVFPIFYHVDPSHVRKQ 127

Query: 123 NGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGWVVLEKEY 163
            G+FGEAFA  E  + DK+  W  ALT  +++SGW +L+  Y
Sbjct: 128 EGSFGEAFAGYEENWKDKIPRWRTALTEAANLSGWHLLDDRY 169

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BLAST of CsaV3_2G005040 vs. ExPASy Swiss-Prot
Match: V9M398 (Disease resistance protein RUN1 OS=Vitis rotundifolia OX=103349 GN=RUN1 PE=1 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.2e-38
Identity = 87/161 (54.04%), Postives = 109/161 (67.70%), Query Frame = 0


Query: 3   RASGSSSSSCF-----RWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQ 62
           RAS SSSSS         T+DVFLSFRGEDTR NFT HL  AL +RGI  F D+++ RG+
Sbjct: 8   RASSSSSSSSTPSIPRTITYDVFLSFRGEDTRFNFTDHLYSALGRRGIRTFRDDKLRRGE 67

Query: 63  EISASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMC---KELRGQVVLPIFYKVNP 122
            I+  L +AIEES+ S+++ S+NYA S WCL+ELVKI+ C   K+  G  V PIFY V+P
Sbjct: 68  AIAPELLKAIEESRSSVIVFSENYARSRWCLDELVKIMECHKDKKDPGHAVFPIFYHVDP 127

Query: 123 SQVRKQNGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGW 156
           S VRKQ G+FGEAFA       DK+  W  ALT  +++SGW
Sbjct: 128 SHVRKQEGSFGEAFAGYGENLKDKIPRWRTALTEAANLSGW 168

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BLAST of CsaV3_2G005040 vs. ExPASy Swiss-Prot
Match: Q40392 (TMV resistance protein N OS=Nicotiana glutinosa OX=35889 GN=N PE=1 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 4.4e-34
Identity = 78/152 (51.32%), Postives = 101/152 (66.45%), Query Frame = 0


Query: 7   SSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDN-RISRGQEISASLFE 66
           +SSSS  RW++DVFLSFRGEDTR  FTSHL   L  +GI  F D+ R+  G  I   L +
Sbjct: 2   ASSSSSSRWSYDVFLSFRGEDTRKTFTSHLYEVLNDKGIKTFQDDKRLEYGATIPGELCK 61

Query: 67  AIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQNGAFG 126
           AIEES+ +IV+ S+NYA+S WCLNELVKI+ CK    Q V+PIFY V+PS VR Q  +F 
Sbjct: 62  AIEESQFAIVVFSENYATSRWCLNELVKIMECKTRFKQTVIPIFYDVDPSHVRNQKESFA 121

Query: 127 EAFAELEVRFFDK---MQAWGEALTAVSHMSG 155
           +AF E E ++ D    +Q W  AL   +++ G
Sbjct: 122 KAFEEHETKYKDDVEGIQRWRIALNEAANLKG 153

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BLAST of CsaV3_2G005040 vs. ExPASy Swiss-Prot
Match: F4JWM0 (Disease resistance-like protein DSC2 OS=Arabidopsis thaliana OX=3702 GN=DSC2 PE=1 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 5.7e-34
Identity = 73/141 (51.77%), Postives = 98/141 (69.50%), Query Frame = 0


Query: 15  WTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEISASLFEAIEESKISI 74
           WT  VF SFRGED R  F SH+    + +GI  FID+ + RG+ I   LF+AI ESKI+I
Sbjct: 59  WTHQVFPSFRGEDVRKGFLSHIQKEFKSKGIVPFIDDEMKRGESIGPGLFQAIRESKIAI 118

Query: 75  VIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQNGAFGEAFAELEV- 134
           V++S+NYASSSWCLNELV+I+ C+E  GQ V+ +FY+V+PS VRKQ G FG+AF +  V 
Sbjct: 119 VLLSKNYASSSWCLNELVEIMNCREEIGQTVMTVFYQVDPSDVRKQTGDFGKAFKKTCVG 178

Query: 135 RFFDKMQAWGEALTAVSHMSG 155
           +  +  Q W  AL  V+++ G
Sbjct: 179 KTQEVKQRWSRALMDVANILG 199

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BLAST of CsaV3_2G005040 vs. ExPASy Swiss-Prot
Match: Q9SZ66 (Disease resistance-like protein DSC1 OS=Arabidopsis thaliana OX=3702 GN=DSC1 PE=1 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 7.5e-34
Identity = 79/155 (50.97%), Postives = 107/155 (69.03%), Query Frame = 0


Query: 9   SSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEISASLFEAIE 68
           SSS     FDVFLSFRG DTR+NFT HL  ALR RGI+ FID+R+ RG  ++A LF+ IE
Sbjct: 3   SSSPSSAEFDVFLSFRGFDTRNNFTGHLQKALRLRGIDSFIDDRLRRGDNLTA-LFDRIE 62

Query: 69  ESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQNGAFGEAF 128
           +SKI+I++ S NYA+S+WCL ELVKI+ C+    Q+V+PIFYKV+ S V KQ  +F   F
Sbjct: 63  KSKIAIIVFSTNYANSAWCLRELVKILECRNSNQQLVVPIFYKVDKSDVEKQRNSFAVPF 122

Query: 129 AELEVRF----FDKMQAWGEALTAVSHMSGWVVLE 160
              E+ F     +++ +W  AL + S++ G+VV E
Sbjct: 123 KLPELTFPGVTPEEISSWKAALASASNILGYVVKE 156

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BLAST of CsaV3_2G005040 vs. ExPASy TrEMBL
Match: A0A0A0LFP7 (TIR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G021510 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 2.4e-83
Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MDRASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEIS 60
           MDRASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEIS
Sbjct: 1   MDRASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEIS 60

Query: 61  ASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQ 120
           ASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQ
Sbjct: 61  ASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQ 120

Query: 121 NGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGWVVLEKE 162
           NGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGWVVLEK+
Sbjct: 121 NGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGWVVLEKD 161

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BLAST of CsaV3_2G005040 vs. ExPASy TrEMBL
Match: D9I8I7 (TIR-NBS-LRR-AAA+ATPase class resistance protein OS=Cucumis sativus OX=3659 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 2.1e-71
Identity = 140/143 (97.90%), Postives = 142/143 (99.30%), Query Frame = 0


Query: 19  VFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEISASLFEAIEESKISIVIIS 78
           V +SFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEISASLFEAIEESKISIVIIS
Sbjct: 17  VLISFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEISASLFEAIEESKISIVIIS 76

Query: 79  QNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQNGAFGEAFAELEVRFFDK 138
           QNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQNGAFGEAFAELEVRFFDK
Sbjct: 77  QNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQNGAFGEAFAELEVRFFDK 136

Query: 139 MQAWGEALTAVSHMSGWVVLEKE 162
           MQAWGEALTAVSHMSGWVVLEK+
Sbjct: 137 MQAWGEALTAVSHMSGWVVLEKD 159

[Close]

BLAST of CsaV3_2G005040 vs. ExPASy TrEMBL
Match: D9I8I5 (Putative TIR-NBS-LRR-AAA+ATPase OS=Cucumis sativus OX=3659 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 4.1e-67
Identity = 129/161 (80.12%), Postives = 147/161 (91.30%), Query Frame = 0


Query: 1   MDRASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEIS 60
           M++A GSSSSSCFRW+FDVFLSFRGEDTRSNFTSHLNM LRQRGINVFID ++SRG+EI 
Sbjct: 1   MNQAGGSSSSSCFRWSFDVFLSFRGEDTRSNFTSHLNMTLRQRGINVFIDKKLSRGEEIC 60

Query: 61  ASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQ 120
           ASL EAIE SKISIV+IS++YASSSWCLNELVKIIMC +LRGQVVLPIFYKV+PS+V KQ
Sbjct: 61  ASLLEAIEGSKISIVVISESYASSSWCLNELVKIIMCNKLRGQVVLPIFYKVDPSEVGKQ 120

Query: 121 NGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGWVVLEKE 162
           +G FGE FA+LEVRFF+KMQAW EAL  VSHMSGW VL+++
Sbjct: 121 SGRFGEEFAKLEVRFFNKMQAWKEALITVSHMSGWPVLQRD 161

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BLAST of CsaV3_2G005040 vs. ExPASy TrEMBL
Match: E7CHD0 (Putative TIR-NBS-LRR-AAA+ATPase OS=Cucumis sativus var. hardwickii OX=319220 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 4.1e-67
Identity = 129/161 (80.12%), Postives = 147/161 (91.30%), Query Frame = 0


Query: 1   MDRASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEIS 60
           M++A GSSSSSCFRW+FDVFLSFRGEDTRSNFTSHLNM LRQRGINVFID ++SRG+EI 
Sbjct: 1   MNQAGGSSSSSCFRWSFDVFLSFRGEDTRSNFTSHLNMTLRQRGINVFIDKKLSRGEEIC 60

Query: 61  ASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQ 120
           ASL EAIE SKISIV+IS++YASSSWCLNELVKIIMC +LRGQVVLPIFYKV+PS+V KQ
Sbjct: 61  ASLLEAIEGSKISIVVISESYASSSWCLNELVKIIMCNKLRGQVVLPIFYKVDPSEVGKQ 120

Query: 121 NGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGWVVLEKE 162
           +G FGE FA+LEVRFF+KMQAW EAL  VSHMSGW VL+++
Sbjct: 121 SGRFGEEFAKLEVRFFNKMQAWKEALITVSHMSGWPVLQRD 161

[Close]

BLAST of CsaV3_2G005040 vs. ExPASy TrEMBL
Match: A0A0A0LGB6 (TIR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G021540 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 4.1e-67
Identity = 129/161 (80.12%), Postives = 147/161 (91.30%), Query Frame = 0


Query: 1   MDRASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEIS 60
           M++A GSSSSSCFRW+FDVFLSFRGEDTRSNFTSHLNM LRQRGINVFID ++SRG+EI 
Sbjct: 1   MNQAGGSSSSSCFRWSFDVFLSFRGEDTRSNFTSHLNMTLRQRGINVFIDKKLSRGEEIC 60

Query: 61  ASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQ 120
           ASL EAIE SKISIV+IS++YASSSWCLNELVKIIMC +LRGQVVLPIFYKV+PS+V KQ
Sbjct: 61  ASLLEAIEGSKISIVVISESYASSSWCLNELVKIIMCNKLRGQVVLPIFYKVDPSEVGKQ 120

Query: 121 NGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGWVVLEKE 162
           +G FGE FA+LEVRFF+KMQAW EAL  VSHMSGW VL+++
Sbjct: 121 SGRFGEEFAKLEVRFFNKMQAWKEALITVSHMSGWPVLQRD 161

[Close]

BLAST of CsaV3_2G005040 vs. TAIR 10
Match: AT1G56540.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 149.1 bits (375), Expect = 4.8e-36
Identity = 79/152 (51.97%), Postives = 103/152 (67.76%), Query Frame = 0


Query: 4   ASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEISASL 63
           AS SSSSS   W ++VF SF G D R  F SHL       GI +F D RI R Q I+ +L
Sbjct: 2   ASSSSSSSRRTWRYNVFTSFHGPDVRKTFLSHLRKQFNYNGITMFDDQRIERSQIIAPAL 61

Query: 64  FEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQNGA 123
            EAI ES+I+IV++S+NYASSSWCL+EL++I+ CKE  GQ+V+ +FY V+PS VRKQ G 
Sbjct: 62  TEAIRESRIAIVLLSKNYASSSWCLDELLEILDCKEQLGQIVMTVFYGVHPSDVRKQTGD 121

Query: 124 FGEAFAELEVRFFDKM-QAWGEALTAVSHMSG 155
           FG AF E   R  ++  Q W +ALT V +++G
Sbjct: 122 FGIAFNETCARKTEEQRQKWSQALTYVGNIAG 153

[Close]

BLAST of CsaV3_2G005040 vs. TAIR 10
Match: AT5G18370.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 146.0 bits (367), Expect = 4.1e-35
Identity = 73/141 (51.77%), Postives = 98/141 (69.50%), Query Frame = 0


Query: 15  WTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEISASLFEAIEESKISI 74
           WT  VF SFRGED R  F SH+    + +GI  FID+ + RG+ I   LF+AI ESKI+I
Sbjct: 59  WTHQVFPSFRGEDVRKGFLSHIQKEFKSKGIVPFIDDEMKRGESIGPGLFQAIRESKIAI 118

Query: 75  VIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQNGAFGEAFAELEV- 134
           V++S+NYASSSWCLNELV+I+ C+E  GQ V+ +FY+V+PS VRKQ G FG+AF +  V 
Sbjct: 119 VLLSKNYASSSWCLNELVEIMNCREEIGQTVMTVFYQVDPSDVRKQTGDFGKAFKKTCVG 178

Query: 135 RFFDKMQAWGEALTAVSHMSG 155
           +  +  Q W  AL  V+++ G
Sbjct: 179 KTQEVKQRWSRALMDVANILG 199

[Close]

BLAST of CsaV3_2G005040 vs. TAIR 10
Match: AT4G12010.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 145.6 bits (366), Expect = 5.3e-35
Identity = 79/155 (50.97%), Postives = 107/155 (69.03%), Query Frame = 0


Query: 9   SSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEISASLFEAIE 68
           SSS     FDVFLSFRG DTR+NFT HL  ALR RGI+ FID+R+ RG  ++A LF+ IE
Sbjct: 3   SSSPSSAEFDVFLSFRGFDTRNNFTGHLQKALRLRGIDSFIDDRLRRGDNLTA-LFDRIE 62

Query: 69  ESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQNGAFGEAF 128
           +SKI+I++ S NYA+S+WCL ELVKI+ C+    Q+V+PIFYKV+ S V KQ  +F   F
Sbjct: 63  KSKIAIIVFSTNYANSAWCLRELVKILECRNSNQQLVVPIFYKVDKSDVEKQRNSFAVPF 122

Query: 129 AELEVRF----FDKMQAWGEALTAVSHMSGWVVLE 160
              E+ F     +++ +W  AL + S++ G+VV E
Sbjct: 123 KLPELTFPGVTPEEISSWKAALASASNILGYVVKE 156

[Close]

BLAST of CsaV3_2G005040 vs. TAIR 10
Match: AT1G65850.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 145.2 bits (365), Expect = 6.9e-35
Identity = 73/149 (48.99%), Postives = 101/149 (67.79%), Query Frame = 0


Query: 8   SSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEISASLFEAI 67
           SSSS  +WT  VF SFRGED R  F SH++   +++GI  FIDN I RG+ I   +  AI
Sbjct: 24  SSSSSHKWTHQVFPSFRGEDVRRGFLSHIHKEFQRKGITPFIDNEIKRGESIGLEIIHAI 83

Query: 68  EESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQNGAFGEA 127
            ESKI+IV++S+NYASSSWCL+ELV+I+ CKE   Q+V+PIFY+V+PS V+K  G FG  
Sbjct: 84  RESKIAIVLLSRNYASSSWCLDELVEIMKCKEEFSQIVIPIFYRVDPSDVKKLTGNFGNV 143

Query: 128 FAELEV-RFFDKMQAWGEALTAVSHMSGW 156
           F    V +  + ++ W +AL  +   +G+
Sbjct: 144 FKNNCVGKTNEVIRKWRQALAKMGTTTGY 172

[Close]

BLAST of CsaV3_2G005040 vs. TAIR 10
Match: AT1G65850.2 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 145.2 bits (365), Expect = 6.9e-35
Identity = 74/153 (48.37%), Postives = 103/153 (67.32%), Query Frame = 0


Query: 4   ASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEISASL 63
           +S  SSSS  +WT  VF SFRGED R  F SH++   +++GI  FIDN I RG+ I   +
Sbjct: 35  SSVPSSSSSHKWTHQVFPSFRGEDVRRGFLSHIHKEFQRKGITPFIDNEIKRGESIGLEI 94

Query: 64  FEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQNGA 123
             AI ESKI+IV++S+NYASSSWCL+ELV+I+ CKE   Q+V+PIFY+V+PS V+K  G 
Sbjct: 95  IHAIRESKIAIVLLSRNYASSSWCLDELVEIMKCKEEFSQIVIPIFYRVDPSDVKKLTGN 154

Query: 124 FGEAFAELEV-RFFDKMQAWGEALTAVSHMSGW 156
           FG  F    V +  + ++ W +AL  +   +G+
Sbjct: 155 FGNVFKNNCVGKTNEVIRKWRQALAKMGTTTGY 187

The following BLAST results are available for this feature:

BLAST of CsaV3_2G005040 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8651589.1	2.6e-132	100.00	hypothetical protein Csa_023433 [Cucumis sativus]	[more]
XP_031737216.1	4.9e-83	99.38	TMV resistance protein N isoform X3 [Cucumis sativus]	[more]
XP_011648801.1	4.9e-83	99.38	TMV resistance protein N isoform X2 [Cucumis sativus]	[more]
XP_031737215.1	4.9e-83	99.38	TMV resistance protein N isoform X1 [Cucumis sativus]	[more]
ADI99937.1	4.3e-71	97.90	TIR-NBS-LRR-AAA+ATPase class resistance protein [Cucumis sativus]	[more]

BLAST of CsaV3_2G005040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
V9M2S5	7.4e-42	54.32	Disease resistance protein RPV1 OS=Vitis rotundifolia OX=103349 GN=RPV1 PE=1 SV=...	[more]
V9M398	2.2e-38	54.04	Disease resistance protein RUN1 OS=Vitis rotundifolia OX=103349 GN=RUN1 PE=1 SV=...	[more]
Q40392	4.4e-34	51.32	TMV resistance protein N OS=Nicotiana glutinosa OX=35889 GN=N PE=1 SV=1	[more]
F4JWM0	5.7e-34	51.77	Disease resistance-like protein DSC2 OS=Arabidopsis thaliana OX=3702 GN=DSC2 PE=...	[more]
Q9SZ66	7.5e-34	50.97	Disease resistance-like protein DSC1 OS=Arabidopsis thaliana OX=3702 GN=DSC1 PE=...	[more]

BLAST of CsaV3_2G005040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFP7	2.4e-83	99.38	TIR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G021510 PE=4 SV...	[more]
D9I8I7	2.1e-71	97.90	TIR-NBS-LRR-AAA+ATPase class resistance protein OS=Cucumis sativus OX=3659 PE=4 ...	[more]
D9I8I5	4.1e-67	80.12	Putative TIR-NBS-LRR-AAA+ATPase OS=Cucumis sativus OX=3659 PE=4 SV=1	[more]
E7CHD0	4.1e-67	80.12	Putative TIR-NBS-LRR-AAA+ATPase OS=Cucumis sativus var. hardwickii OX=319220 PE=...	[more]
A0A0A0LGB6	4.1e-67	80.12	TIR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G021540 PE=4 SV...	[more]

BLAST of CsaV3_2G005040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G56540.1	4.8e-36	51.97	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT5G18370.1	4.1e-35	51.77	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT4G12010.1	5.3e-35	50.97	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT1G65850.1	6.9e-35	48.99	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT1G65850.2	6.9e-35	48.37	Disease resistance protein (TIR-NBS-LRR class) family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	SMART	SM00255	till_3	coord: 16..152 e-value: 1.1E-49 score: 181.0
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	PFAM	PF01582	TIR	coord: 17..150 e-value: 5.4E-44 score: 150.1
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	PROSITE	PS50104	TIR	coord: 15..171 score: 34.807407
IPR035897	Toll/interleukin-1 receptor homology (TIR) domain superfamily	GENE3D	3.40.50.10140		coord: 11..166 e-value: 3.9E-64 score: 217.5
IPR035897	Toll/interleukin-1 receptor homology (TIR) domain superfamily	SUPERFAMILY	52200	Toll/Interleukin receptor TIR domain	coord: 6..155
None	No IPR available	PANTHER	PTHR32009:SF60	TOLL/INTERLEUKIN-1 RECEPTOR-LIKE PROTEIN	coord: 8..159
None	No IPR available	PANTHER	PTHR32009	TMV RESISTANCE PROTEIN N-LIKE	coord: 8..159

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G005040.1	CsaV3_2G005040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007165	signal transduction
molecular_function	GO:0003953	NAD+ nucleosidase activity