CsaV3_2G004260 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAATTGCTTTAGAAGTCAACAGTTTCAACAAATCATTTATAAAAAAAGTGGAGAGAAGAAAATTTGATTGCTGGCCAAACATAAACACAAAAAAGCCCCACACCCATTTGAATTTGATGATCGATCATATAATTCAAACTTGTTTGAAAGAATTTCAAAAACCCATTTCTTCTTTTTGTGTTTGATCTTCTGAAACACCAAGATGGGGAAAGCTGGAAAATGGATATTGAATTTTCTTCTTGGGAAAAAGGATGAAAATCAAAAGAAAAAGAAGAAGAAGAAAATGGGTTCTTCTTCTTCTTCTTCTTTTCCTGATCACCCTGAAAATTTGAAGCTAAAGTGGAGTTTTAGAAAGACATCAACCAAAAGTTCTAACCTTCTTTTAACTCATCATCTTTCTAAATCTGTTAACTCCATTGACACCATTCAAGCTTTGAACCATGTGGCCATCGCAGAGCAGAGGAAGCCACCATCAACTGTTCAAAATGCTGCTGCTACCACGATCCAATCCGCCTATCGGTCTCATTTGGTAACAAATGTTTCTTTTCCCTACTTCCTTCCGAGTTATCAATTTAGTCTCTATATTTTATTATGTGTTTTGATTGTTTTTTAGTAGTGTTAAATTAAACTCTTTAGAATACAATAACATTAGAAATTAGACTCTCAAATGATAAAAGATGAACCATCAAGTTTCAACTTTACAATTATATAAGTTTGATGATCCAATTTTTAATTTTACGGTTGAAAATTTGAAAGTACAATTGCAACTACCACAGTTCGTTAGGAATGATCTTTTCAAATTAACGATATATAAAGTTGTTGATTTTGCCTTTACCTTAACTGCCTTTCTTTGTTATAATTGCTTGAAAGTTAGCTGGTATAGAAAGTTGGAGATAAACTATGCCACTCATGATGATGCTGTATGAGCTTTTTATTTGTCAATTCAATTGAATAGCATTTTTGTGAAGTTGTTTGGTAGTAAAATGAAAAAATGTTGGCTTCGTTTGTTGTGATTTGCTTGGTTTGTTTTAGGCAAGGAAAGCATTGCATGCTTTAAGAGCATTGGTTAAGATACAAGCACTTGTGAGAGGCCATCTTGTGAGAAAACAAACAGCTGCTACCCTTAAGAGCCTGCAAGCTTTGATGGCAATCCAAGTTCGAGCTCGGGCAAGTCGGATCCAGCTGCTCGAGGAGGATGAAGAGCTTCCTGAAAGGAGGCGCTGTAAGCATACCATTAACACCAATCTCGAACAATTATACAAAGTAAATTTCACAACTCATCTTATAAAAGTGTTTCTATTTACTTTGAAAAGATTACGAATAATACTCATTTCATTTTGTTTATACTTGTTTTCTTGGCTTTTCTTATTTAGGAGAGACTAAACGTGAATCTCAATGAAAAATTGAAACCATATAAAAGTAAGAGTGGCCATATAAGTCGTTCTCAAATTGAGCAGATAGAGAATGAACAAGATGCTTATTGTAGACGAAATTTTTCGACTCCAAGGAGGCAACTTCAATACAAAAATCAATCCTCCTCCATGGAATCAGACACTTCTGAGTATTATATATTGGTGTCGAAACCAACAGCTGACACAACCTTATATTCTATGGATCAACAAAGGCATTCAGATTTTGTGCCGGATGACTATCTCTTATATCCAAATTATATGGCCAAGACAGAATCCTCAAGGGCAAAAGTACGATCGCAAAGTGAACCGAAACAAAGACCCAATTCGAACGCACGAATGAAGAGCAAGCAAATAGGAACAGCTGACAGAATCAATCTAAATGATCAAATCCATAACTCTTTACAAGGTCCGAAGCATAATGGCTATGAAAATCACAACCCTTGGTTCATGAAGCTTTATCAGTTCAAAAAAACGTCCAAGAACCAAGATGGCGACTCTACAAGCAGCAAATTTAGTTATTCCAACGACTGATCTTGATTATATTGCTTACTTTTCATCGATTCTATTAGAATTGATCAAACTTCAATGAGATATTGTACACTTGAAATCATTATTGACTCCGTCGAATTTACAAAGAACGACTTCAATTGTTTCAGGAAGCGTTAAAAATGGAGTGCTACATTTGACAAGAAAAAATTGCTTCTAAACTCACAACTCTCGAAACAGAGCCCTAATTTGTACTCCATTCAAAGTTCATTTCTACTTCAACAAAGGAACATTCACTAAAACTGAGATCATCTTAGCCATCTAAACTGTTGTAAATTTACATTCCTACAACAGAAATGTAGCATATCAGCTACTACTAATGAGTTAAAACTAAGGATGACAAATAACTGCTACTCGTTACATCGTCTATCAAACTAAAAGAATTATAATCTACAATGAAAAGATATTTTCTCCTTCTTAGCGGCTGCCTAAGTGTCAATTATACCTCGAGAAAATGTGGTGACTCTAGATCATACACTTACAAGTTCTAGCAGTTACGTTATCGTACATATTCGAGAGCGGTTCACGTTTCCTGCTTGAGAGTATTTTCTTTGAAGCTTTTACTCAACCAGATAGCGGTTTCCCTTGGGGAGACTTTCTCAGGCCCAAATGGCTTCAGCAGCACCCCAAGCTCTTCATACCTCTCTTGCTGCAACAATCTCGCACTAAACTCAAGCAGACCTTCCAAAGCCTCAGCTCTTTGTTGTAAAGATGAAGTATCAAAATGGCGTCGCCGTAAGTCTGATGATGTATGGCTTGATGCCCCAGCAGTTGCATTCTGATCTGAGGAATCACTTCGTGCTACTTGGTCATCTTGGAATATGCTGCATTGTATTCCCTGCCATGCGCTAGTGTAACCAGGAGTTGAACAAACCTTGTCACAGACTTGGATTGTACATTTGTCTTTGGTTATGGAACAATCAATGTGCTGCAGGGAGCCAGTTGATCCGTGCATGGATGGCAGTGAAGCACGGCGAACAGGAAGAAAGGTATCATCATATGATGCTAAAGGGAATTCAGCAATCCTGTCAATTCGGGGAGAATTCACCGAGACATCTGGGGACTTGATATGGTGAAGAATACCAGCATTTGGTCTGCAAGGGTTTTGATCAGTAGCAGCTTTCGTATGCAATGGGAATGATGCTCGACGAACATGAGATTTACTAGGAGTAGATGAAATGGGAAGCTGCTGTAACAAAGATGAAGTTTCAGTTTTTATTACAACAATCGGCATTAATAAGGTAGATCATCCAGACTTGGATCAACTTCAACTTACCACTTTTTTATCGTTTTTCAACGGTTCAGCCCATTTTTTCGGAGTGGCATGTGCTTTTGATAGAAGCCGTGTAGTTTTAGCATTAGTTGCAGACTTGGAAGGAGTCTTGTGAATCGCTACTCCACCTCGAGTGCCACCGATGGATGGCTTTCGACTTGGATAGTTTTGTGTATCATGTATATCATGTGTTGAGCTGAGAGAATCGTACTCAATTACAGAAACACTTGGATTTATGGCTCGATCGTTGCTTAAAGAATGTCGCTTATAGGGAAATGGCTCAGAGAACCTCGTCTTCTTCATATAATTGGGTTCGGACCAGAGTGCTGGTAACGTACTGCGTCTTGGAGAATTTAGTTTGAGATGAATCTGAACAATATAAGACTGCAAATGAGGATGACCAAGTAGCTCCCCTGCCTGCCAAACAAAATTAACACTGGAGTCAGAAAACCTAAAAAAGGGAGCAATTACATACATGGTACAACAGAATATAATGAAATTTATTGGTTAAAAAGACAAATAAATTTGATAAACTTTTTCAGTAACAATCATTTGTCACTTCAGTCCATTTGGAATTCTTTTGGATAAGAAAATTAGAGGATTGAAGAGATCAGATAGACTCGTAGATGGTTTTCTTTTGTTCATATCAGAGTAGATTATGAGTGGAGGATAACACATACACTTGGTCGAAGTTCTGGGTTTTTGCGTAGCATGCTTTTGACGAGACCTCGACTATAAACCAAAGAGGAAAGAGATTAGATTGACGATAACACAGGATCAACAAGGAGTATAAAAAGGAGGAAAAAACTTACAATGCACCAGAATATTTTGTTGGAAGAGGGGCCACAATGGACTTGTTAATTTTATTGATAAGAGCTTGCATATCCTGCTCAAAAGACATGATCCAAATCAGAAAAAAAAAATAGCAAAACTCAGCATTCAACACAAATAAGCTTCAAAAGATATTGAGCCAACTACAAGAAGGCCATCCAAAAATCGCATATTTTCATTATTGTACACAAAATCAACATTGGTGCAGAGTAGAAAAGAAGAAACAAAGGTTAAAAAGTGAAAGAGGATGGGCTTTTAAAGGGCAACAGTTGGATTTAGGAATTACAACCATTACATATTATATGTGAGGCTTTTTTTTGTTTTTTGAGGTGTTCATTTGACGTTTCTAGCTTGAATTTCAATATGTACTACAGTTTGTATATAGTTAACTGACTTCCTCGATAATCAACCCTGAGCAATGGACTTACTCGGTATATTCAAAGATACCCTCTATCATCCTCGTCTGAGACTAGGTAGAAAGCTCAATAATTAAAATCATTGGTGTCTCCTAAAGCAATTCGTAGGATGATTAAAGCCTCCAAGGAATTAGTGGGTTGTACATGAAGAAAATAAGGTAAGAAGTGGATCCCAATTCCTTAGTTATAAAATAAAACCATACTTACTACAGTGGGAATGGAGCTATCTAATGCACATAAGCCACCAAATTTGGGCAAAAAAAGTCCATCAGCTCAAAAAAAAATTAAAAAAAAAAAAGGTGTAAAAGAATTCATAGTTTATAAAAACAACAATCATGTGCTAAAGATCAGAAATTGGCATTTGAAATTCCTGAATGAGAACAAATTGCGTCCGGAACTTACAAATGCTTTAAATGCTGGCTTTAGAGCAGTCATCTCATATATACAGCATCCTGGGAGACATATGTCAAATAGAGTCATTTCAAGTCAATAAGGGCAAAACAAGGTTCACAGTTGAGTTCAGCAGTTCTTACCTAAAGACCAAATATCTGACTTTGAACCATAAGGTATATCAGCAAGAAGTTCCGGACACATATAGCTCGGTGTTCC ATGGGGAAAGCTGGAAAATGGATATTGAATTTTCTTCTTGGGAAAAAGGATGAAAATCAAAAGAAAAAGAAGAAGAAGAAAATGGGTTCTTCTTCTTCTTCTTCTTTTCCTGATCACCCTGAAAATTTGAAGCTAAAGTGGAGTTTTAGAAAGACATCAACCAAAAGTTCTAACCTTCTTTTAACTCATCATCTTTCTAAATCTGTTAACTCCATTGACACCATTCAAGCTTTGAACCATGTGGCCATCGCAGAGCAGAGGAAGCCACCATCAACTGTTCAAAATGCTGCTGCTACCACGATCCAATCCGCCTATCGGTCTCATTTGGCAAGGAAAGCATTGCATGCTTTAAGAGCATTGGTTAAGATACAAGCACTTGTGAGAGGCCATCTTGTGAGAAAACAAACAGCTGCTACCCTTAAGAGCCTGCAAGCTTTGATGGCAATCCAAGTTCGAGCTCGGGCAAGTCGGATCCAGCTGCTCGAGGAGGATGAAGAGCTTCCTGAAAGGAGGCGCTGTAAGCATACCATTAACACCAATCTCGAACAATTATACAAAGAGAGACTAAACGTGAATCTCAATGAAAAATTGAAACCATATAAAAGTAAGAGTGGCCATATAAGTCGTTCTCAAATTGAGCAGATAGAGAATGAACAAGATGCTTATTGTAGACGAAATTTTTCGACTCCAAGGAGGCAACTTCAATACAAAAATCAATCCTCCTCCATGGAATCAGACACTTCTGAGTATTATATATTGGTGTCGAAACCAACAGCTGACACAACCTTATATTCTATGGATCAACAAAGGCATTCAGATTTTGTGCCGGATGACTATCTCTTATATCCAAATTATATGGCCAAGACAGAATCCTCAAGGGCAAAAGTACGATCGCAAAGTGAACCGAAACAAAGACCCAATTCGAACGCACGAATGAAGAGCAAGCAAATAGGAACAGCTGACAGAATCAATCTAAATGATCAAATCCATAACTCTTTACAAGGTCCGAAGCATAATGGCTATGAAAATCACAACCCTTGGTTCATGAAGCTTTATCAGTTCAAAAAAACGTCCAAGAACCAAGATGGCGACTCTACAAGCAGCAAATTTAGTTATTCCAACGACTGA ATGGGGAAAGCTGGAAAATGGATATTGAATTTTCTTCTTGGGAAAAAGGATGAAAATCAAAAGAAAAAGAAGAAGAAGAAAATGGGTTCTTCTTCTTCTTCTTCTTTTCCTGATCACCCTGAAAATTTGAAGCTAAAGTGGAGTTTTAGAAAGACATCAACCAAAAGTTCTAACCTTCTTTTAACTCATCATCTTTCTAAATCTGTTAACTCCATTGACACCATTCAAGCTTTGAACCATGTGGCCATCGCAGAGCAGAGGAAGCCACCATCAACTGTTCAAAATGCTGCTGCTACCACGATCCAATCCGCCTATCGGTCTCATTTGGCAAGGAAAGCATTGCATGCTTTAAGAGCATTGGTTAAGATACAAGCACTTGTGAGAGGCCATCTTGTGAGAAAACAAACAGCTGCTACCCTTAAGAGCCTGCAAGCTTTGATGGCAATCCAAGTTCGAGCTCGGGCAAGTCGGATCCAGCTGCTCGAGGAGGATGAAGAGCTTCCTGAAAGGAGGCGCTGTAAGCATACCATTAACACCAATCTCGAACAATTATACAAAGAGAGACTAAACGTGAATCTCAATGAAAAATTGAAACCATATAAAAGTAAGAGTGGCCATATAAGTCGTTCTCAAATTGAGCAGATAGAGAATGAACAAGATGCTTATTGTAGACGAAATTTTTCGACTCCAAGGAGGCAACTTCAATACAAAAATCAATCCTCCTCCATGGAATCAGACACTTCTGAGTATTATATATTGGTGTCGAAACCAACAGCTGACACAACCTTATATTCTATGGATCAACAAAGGCATTCAGATTTTGTGCCGGATGACTATCTCTTATATCCAAATTATATGGCCAAGACAGAATCCTCAAGGGCAAAAGTACGATCGCAAAGTGAACCGAAACAAAGACCCAATTCGAACGCACGAATGAAGAGCAAGCAAATAGGAACAGCTGACAGAATCAATCTAAATGATCAAATCCATAACTCTTTACAAGGTCCGAAGCATAATGGCTATGAAAATCACAACCCTTGGTTCATGAAGCTTTATCAGTTCAAAAAAACGTCCAAGAACCAAGATGGCGACTCTACAAGCAGCAAATTTAGTTATTCCAACGACTGA MGKAGKWILNFLLGKKDENQKKKKKKKMGSSSSSSFPDHPENLKLKWSFRKTSTKSSNLLLTHHLSKSVNSIDTIQALNHVAIAEQRKPPSTVQNAAATTIQSAYRSHLARKALHALRALVKIQALVRGHLVRKQTAATLKSLQALMAIQVRARASRIQLLEEDEELPERRRCKHTINTNLEQLYKERLNVNLNEKLKPYKSKSGHISRSQIEQIENEQDAYCRRNFSTPRRQLQYKNQSSSMESDTSEYYILVSKPTADTTLYSMDQQRHSDFVPDDYLLYPNYMAKTESSRAKVRSQSEPKQRPNSNARMKSKQIGTADRINLNDQIHNSLQGPKHNGYENHNPWFMKLYQFKKTSKNQDGDSTSSKFSYSND* Homology
BLAST of CsaV3_2G004260 vs. NCBI nr
Match: XP_011648766.2 (uncharacterized protein LOC101218293 [Cucumis sativus] >KAE8651563.1 hypothetical protein Csa_019371 [Cucumis sativus]) HSP 1 Score: 709.1 bits (1829), Expect = 2.0e-200 Identity = 375/375 (100.00%), Postives = 375/375 (100.00%), Query Frame = 0
BLAST of CsaV3_2G004260 vs. NCBI nr
Match: XP_008455809.1 (PREDICTED: uncharacterized protein LOC103495905 [Cucumis melo]) HSP 1 Score: 634.8 bits (1636), Expect = 4.7e-178 Identity = 343/375 (91.47%), Postives = 356/375 (94.93%), Query Frame = 0
BLAST of CsaV3_2G004260 vs. NCBI nr
Match: KAA0063620.1 (protein IQ-DOMAIN 14-like [Cucumis melo var. makuwa] >TYK18406.1 protein IQ-DOMAIN 14-like [Cucumis melo var. makuwa]) HSP 1 Score: 620.9 bits (1600), Expect = 7.1e-174 Identity = 338/375 (90.13%), Postives = 354/375 (94.40%), Query Frame = 0
BLAST of CsaV3_2G004260 vs. NCBI nr
Match: XP_038890615.1 (uncharacterized protein LOC120080123 [Benincasa hispida]) HSP 1 Score: 567.4 bits (1461), Expect = 9.3e-158 Identity = 312/378 (82.54%), Postives = 341/378 (90.21%), Query Frame = 0
BLAST of CsaV3_2G004260 vs. NCBI nr
Match: KAG7021149.1 (Protein IQ-DOMAIN 14, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 435.6 bits (1119), Expect = 4.2e-118 Identity = 257/373 (68.90%), Postives = 301/373 (80.70%), Query Frame = 0
BLAST of CsaV3_2G004260 vs. ExPASy Swiss-Prot
Match: A0A1P8B590 (Protein IQ-DOMAIN 19 OS=Arabidopsis thaliana OX=3702 GN=IQD19 PE=1 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 4.2e-20 Identity = 113/356 (31.74%), Postives = 163/356 (45.79%), Query Frame = 0
BLAST of CsaV3_2G004260 vs. ExPASy Swiss-Prot
Match: F4J061 (Protein IQ-DOMAIN 5 OS=Arabidopsis thaliana OX=3702 GN=IQD5 PE=1 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 1.1e-15 Identity = 70/175 (40.00%), Postives = 99/175 (56.57%), Query Frame = 0
BLAST of CsaV3_2G004260 vs. ExPASy Swiss-Prot
Match: Q9FIT1 (Protein IQ-DOMAIN 23 OS=Arabidopsis thaliana OX=3702 GN=IQD23 PE=1 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 3.8e-13 Identity = 76/229 (33.19%), Postives = 113/229 (49.34%), Query Frame = 0
BLAST of CsaV3_2G004260 vs. ExPASy Swiss-Prot
Match: Q9LYP2 (Protein IQ-DOMAIN 24 OS=Arabidopsis thaliana OX=3702 GN=IQD24 PE=1 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 6.5e-13 Identity = 81/237 (34.18%), Postives = 119/237 (50.21%), Query Frame = 0
BLAST of CsaV3_2G004260 vs. ExPASy Swiss-Prot
Match: Q9LK76 (Protein IQ-domain 26 OS=Arabidopsis thaliana OX=3702 GN=IQD26 PE=1 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 5.2e-10 Identity = 88/338 (26.04%), Postives = 154/338 (45.56%), Query Frame = 0
BLAST of CsaV3_2G004260 vs. ExPASy TrEMBL
Match: A0A0A0LJD2 (DUF4005 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G011550 PE=4 SV=1) HSP 1 Score: 691.8 bits (1784), Expect = 1.6e-195 Identity = 373/397 (93.95%), Postives = 373/397 (93.95%), Query Frame = 0
BLAST of CsaV3_2G004260 vs. ExPASy TrEMBL
Match: A0A1S3C304 (uncharacterized protein LOC103495905 OS=Cucumis melo OX=3656 GN=LOC103495905 PE=4 SV=1) HSP 1 Score: 634.8 bits (1636), Expect = 2.3e-178 Identity = 343/375 (91.47%), Postives = 356/375 (94.93%), Query Frame = 0
BLAST of CsaV3_2G004260 vs. ExPASy TrEMBL
Match: A0A5A7V8W2 (Protein IQ-DOMAIN 14-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001310 PE=4 SV=1) HSP 1 Score: 620.9 bits (1600), Expect = 3.4e-174 Identity = 338/375 (90.13%), Postives = 354/375 (94.40%), Query Frame = 0
BLAST of CsaV3_2G004260 vs. ExPASy TrEMBL
Match: A0A6J1FBW0 (protein IQ-DOMAIN 14-like OS=Cucurbita moschata OX=3662 GN=LOC111444008 PE=4 SV=1) HSP 1 Score: 424.9 bits (1091), Expect = 3.6e-115 Identity = 255/373 (68.36%), Postives = 299/373 (80.16%), Query Frame = 0
BLAST of CsaV3_2G004260 vs. ExPASy TrEMBL
Match: A0A6J1CPD3 (protein IQ-DOMAIN 14-like OS=Momordica charantia OX=3673 GN=LOC111012945 PE=4 SV=1) HSP 1 Score: 417.5 bits (1072), Expect = 5.7e-113 Identity = 246/336 (73.21%), Postives = 277/336 (82.44%), Query Frame = 0
BLAST of CsaV3_2G004260 vs. TAIR 10
Match: AT4G14750.1 (IQ-domain 19 ) HSP 1 Score: 100.5 bits (249), Expect = 3.0e-21 Identity = 113/356 (31.74%), Postives = 163/356 (45.79%), Query Frame = 0
BLAST of CsaV3_2G004260 vs. TAIR 10
Match: AT3G22190.1 (IQ-domain 5 ) HSP 1 Score: 85.9 bits (211), Expect = 7.6e-17 Identity = 70/175 (40.00%), Postives = 99/175 (56.57%), Query Frame = 0
BLAST of CsaV3_2G004260 vs. TAIR 10
Match: AT3G22190.2 (IQ-domain 5 ) HSP 1 Score: 85.9 bits (211), Expect = 7.6e-17 Identity = 70/175 (40.00%), Postives = 99/175 (56.57%), Query Frame = 0
BLAST of CsaV3_2G004260 vs. TAIR 10
Match: AT5G62070.1 (IQ-domain 23 ) HSP 1 Score: 77.4 bits (189), Expect = 2.7e-14 Identity = 76/229 (33.19%), Postives = 113/229 (49.34%), Query Frame = 0
BLAST of CsaV3_2G004260 vs. TAIR 10
Match: AT5G07240.1 (IQ-domain 24 ) HSP 1 Score: 76.6 bits (187), Expect = 4.6e-14 Identity = 81/237 (34.18%), Postives = 119/237 (50.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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