CsaV3_2G004090 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G004090
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Descriptionpathogenesis-related protein PR-4-like
Locationchr2: 2108167 .. 2108937 (-)
RNA-Seq ExpressionCsaV3_2G004090
SyntenyCsaV3_2G004090
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCCCAATGAAACTTTACCTACAAACAAAAAGAAAAAGGCTACAAAAGTTGTATAAAGGAGAGAGTTTATATTCTTAGAGAGAATTAAGAAAGGCAAAGAATGGGGAAAGGAAGTATTATGATGATATTGGTGTTGGCTTTGGGGGTTTTGAGCTTAGCAAATGCTCAAAGTGCCACAAATGTAAGAGCTACCTATCATTTGTACAACCCACAAGACATCAATTGGGATTATCTTAGGGCAAGTGTTTTTTGTGCAACATGGGATGCCGACAAGCCTTTGGAATGGCGTCGTCAATACGGTTGGACTGCCTTCTGTGGCCCTGTTGGCCCTCGTGGCCGTGATTCTTGTGGACGTTGTTTGAGGGTAAGAAAATCTTTTAGTTGATGTGATTTTCATTGTAATAAATAACCTCAAAGCCATTTAATATACCATAAAAAAAGAAAGGAGAGTATTTTTAATTTGAGAAACTTTGATGGGTATAATGCAGGTGACTAACACTGAAACGGGAGCTTCGGAAATAGTAAGAATTGTTGATCAATGCGCAAATGGAGGGCTAGATTTAGACGTGAATGTGTTCAGGAGGATTGATACTAATGGAAATGGAAACTTGAGAGGCCATCTTATTGTCAACTATCAATTTGTCAATTGCTAAGATCACTATTTTAAATTTCATTTCATTCCTCCTAGAAGAAGAAAGAAAGCCATGTTCTAATGAATAAAGTATATGAATAATAATAAAGTATGAAATAAAGGTTATTTTTCTTTGATTT

mRNA sequence

ATGGGGAAAGGAAGTATTATGATGATATTGGTGTTGGCTTTGGGGGTTTTGAGCTTAGCAAATGCTCAAAGTGCCACAAATGTAAGAGCTACCTATCATTTGTACAACCCACAAGACATCAATTGGGATTATCTTAGGGCAAGTGTTTTTTGTGCAACATGGGATGCCGACAAGCCTTTGGAATGGCGTCGTCAATACGGTTGGACTGCCTTCTGTGGCCCTGTTGGCCCTCGTGGCCGTGATTCTTGTGGACGTTGTTTGAGGGTGACTAACACTGAAACGGGAGCTTCGGAAATAGTAAGAATTGTTGATCAATGCGCAAATGGAGGGCTAGATTTAGACGTGAATGTGTTCAGGAGGATTGATACTAATGGAAATGGAAACTTGAGAGGCCATCTTATTGTCAACTATCAATTTGTCAATTGCTAA

Coding sequence (CDS)

ATGGGGAAAGGAAGTATTATGATGATATTGGTGTTGGCTTTGGGGGTTTTGAGCTTAGCAAATGCTCAAAGTGCCACAAATGTAAGAGCTACCTATCATTTGTACAACCCACAAGACATCAATTGGGATTATCTTAGGGCAAGTGTTTTTTGTGCAACATGGGATGCCGACAAGCCTTTGGAATGGCGTCGTCAATACGGTTGGACTGCCTTCTGTGGCCCTGTTGGCCCTCGTGGCCGTGATTCTTGTGGACGTTGTTTGAGGGTGACTAACACTGAAACGGGAGCTTCGGAAATAGTAAGAATTGTTGATCAATGCGCAAATGGAGGGCTAGATTTAGACGTGAATGTGTTCAGGAGGATTGATACTAATGGAAATGGAAACTTGAGAGGCCATCTTATTGTCAACTATCAATTTGTCAATTGCTAA

Protein sequence

MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRRIDTNGNGNLRGHLIVNYQFVNC*
Homology
[Close]
BLAST of CsaV3_2G004090 vs. NCBI nr
Match: XP_004139239.1 (pathogenesis-related protein PR-4 [Cucumis sativus] >KGN60804.1 hypothetical protein Csa_019369 [Cucumis sativus])

HSP 1 Score: 302.0 bits (772), Expect = 2.8e-78
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0 

Query: 1   MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL 60
           MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL
Sbjct: 1   MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL 60

Query: 61  EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120
           EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR
Sbjct: 61  EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120

Query: 121 IDTNGNGNLRGHLIVNYQFVNC 143
           IDTNGNGNLRGHLIVNYQFVNC
Sbjct: 121 IDTNGNGNLRGHLIVNYQFVNC 142

[Close]
BLAST of CsaV3_2G004090 vs. NCBI nr
Match: XP_008456018.1 (PREDICTED: pathogenesis-related protein PR-4-like [Cucumis melo] >KAA0063603.1 pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa] >TYK18424.1 pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa])

HSP 1 Score: 292.0 bits (746), Expect = 2.9e-75
Identity = 137/142 (96.48%), Postives = 139/142 (97.89%), Query Frame = 0 

Query: 1   MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL 60
           M KGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDA+KPL
Sbjct: 1   MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPL 60

Query: 61  EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120
           EWRR+YGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR
Sbjct: 61  EWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120

Query: 121 IDTNGNGNLRGHLIVNYQFVNC 143
           IDTNGNGN RGHL VNYQFVNC
Sbjct: 121 IDTNGNGNFRGHLTVNYQFVNC 142

[Close]
BLAST of CsaV3_2G004090 vs. NCBI nr
Match: XP_022999102.1 (pathogenesis-related protein PR-4-like [Cucurbita maxima] >XP_023521168.1 pathogenesis-related protein PR-4-like [Cucurbita pepo subsp. pepo] >XP_023547311.1 pathogenesis-related protein PR-4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 278.9 bits (712), Expect = 2.5e-71
Identity = 129/142 (90.85%), Postives = 135/142 (95.07%), Query Frame = 0 

Query: 1   MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL 60
           M KGS +MIL LALG+LSLANAQSA NVRATYHLYNPQDINWDYLRASVFCATWDA+KP+
Sbjct: 1   MEKGSFLMILALALGILSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPI 60

Query: 61  EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120
           EWRRQYGWTAFCGPVGPRG+ SCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVF+R
Sbjct: 61  EWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKR 120

Query: 121 IDTNGNGNLRGHLIVNYQFVNC 143
           IDTNGNG  RGHLIVNYQFVNC
Sbjct: 121 IDTNGNGVFRGHLIVNYQFVNC 142

[Close]
BLAST of CsaV3_2G004090 vs. NCBI nr
Match: XP_022946136.1 (pathogenesis-related protein PR-4-like [Cucurbita moschata])

HSP 1 Score: 277.3 bits (708), Expect = 7.3e-71
Identity = 130/142 (91.55%), Postives = 135/142 (95.07%), Query Frame = 0 

Query: 1   MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL 60
           M K SI+MIL LALGVLSLANAQSA NVRATYHLYNPQDINWDYLRASVFCATWDA+KP+
Sbjct: 1   MEKVSILMILALALGVLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPI 60

Query: 61  EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120
           EWRRQYGWTAFCGPVGPRG+ SCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVF+R
Sbjct: 61  EWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKR 120

Query: 121 IDTNGNGNLRGHLIVNYQFVNC 143
           IDTNGNG  RGHLIVNYQFVNC
Sbjct: 121 IDTNGNGVFRGHLIVNYQFVNC 142

[Close]
BLAST of CsaV3_2G004090 vs. NCBI nr
Match: KAG6599312.1 (hypothetical protein SDJN03_09090, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 274.6 bits (701), Expect = 4.7e-70
Identity = 128/142 (90.14%), Postives = 134/142 (94.37%), Query Frame = 0 

Query: 1   MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL 60
           M K S +MIL LALGVLSLANAQSA NVRATYHLYNPQDINWDYLRASVFCATWDA+KP+
Sbjct: 1   MEKVSFLMILALALGVLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPI 60

Query: 61  EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120
           EWRRQYGWTAFCGPVGPRG+ SCGRCLRVTNTETG+SEIVRIVDQCANGGLDLDVNVF+R
Sbjct: 61  EWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGSSEIVRIVDQCANGGLDLDVNVFKR 120

Query: 121 IDTNGNGNLRGHLIVNYQFVNC 143
           IDTNGNG  RGHLIVNYQFVNC
Sbjct: 121 IDTNGNGVFRGHLIVNYQFVNC 142

[Close]
BLAST of CsaV3_2G004090 vs. ExPASy Swiss-Prot
Match: P32045 (Pathogenesis-related protein P2 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 6.2e-57
Identity = 99/127 (77.95%), Postives = 110/127 (86.61%), Query Frame = 0 

Query: 16  VLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPV 75
           ++++A AQSATNVRATYHLYNPQ+INWD   ASV+CATWDADKPLEWRR+YGWTAFCGP 
Sbjct: 17  MMAVAAAQSATNVRATYHLYNPQNINWDLRTASVYCATWDADKPLEWRRRYGWTAFCGPA 76

Query: 76  GPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRRIDTNGNGNLRGHLIV 135
           GP G+ SCGRCLRVTNT TG  E VRIVDQC NGGLDLDVNVF R+DTNG G  RG+L V
Sbjct: 77  GPTGQASCGRCLRVTNTGTGTQETVRIVDQCRNGGLDLDVNVFNRLDTNGLGYQRGNLNV 136

Query: 136 NYQFVNC 143
           NY+FVNC
Sbjct: 137 NYEFVNC 143

[Close]
BLAST of CsaV3_2G004090 vs. ExPASy Swiss-Prot
Match: P29063 (Pathogenesis-related protein PR-4B OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 8.1e-57
Identity = 98/137 (71.53%), Postives = 116/137 (84.67%), Query Frame = 0 

Query: 6   IMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQ 65
           + + L++   ++++A AQSATNVR+TYHLYNPQ+INWD   AS FCATWDADKPL WR++
Sbjct: 9   LCVALLIMSVMMAMAAAQSATNVRSTYHLYNPQNINWDLRAASAFCATWDADKPLAWRQK 68

Query: 66  YGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRRIDTNG 125
           YGWTAFCGP GPRG+DSCGRCLRVTNT TG    VRIVDQC+NGGLDLDVNVF ++DTNG
Sbjct: 69  YGWTAFCGPAGPRGQDSCGRCLRVTNTGTGTQATVRIVDQCSNGGLDLDVNVFNQLDTNG 128

Query: 126 NGNLRGHLIVNYQFVNC 143
            G  +GHLIVNY+FVNC
Sbjct: 129 LGYQQGHLIVNYEFVNC 145

[Close]
BLAST of CsaV3_2G004090 vs. ExPASy Swiss-Prot
Match: P29062 (Pathogenesis-related protein PR-4A OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.4e-56
Identity = 98/137 (71.53%), Postives = 115/137 (83.94%), Query Frame = 0 

Query: 6   IMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQ 65
           + + L++   V+++A AQSATNVR+TYHLYNPQ+INWD   AS FCATWDADKPL WR++
Sbjct: 9   LCVALLIISMVMAMAAAQSATNVRSTYHLYNPQNINWDLRAASAFCATWDADKPLAWRQK 68

Query: 66  YGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRRIDTNG 125
           YGWTAFCGP GPRG+DSCGRCLRVTNT TG    VRIVDQC+NGGLDLDVNVF ++DTNG
Sbjct: 69  YGWTAFCGPAGPRGQDSCGRCLRVTNTGTGTQTTVRIVDQCSNGGLDLDVNVFNQLDTNG 128

Query: 126 NGNLRGHLIVNYQFVNC 143
            G  +GHL VNY+FVNC
Sbjct: 129 VGYQQGHLTVNYEFVNC 145

[Close]
BLAST of CsaV3_2G004090 vs. ExPASy Swiss-Prot
Match: P09761 (Wound-induced protein WIN1 OS=Solanum tuberosum OX=4113 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 1.5e-55
Identity = 92/119 (77.31%), Postives = 106/119 (89.08%), Query Frame = 0 

Query: 24  SATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSC 83
           SA NVRATYH+YNPQ++ WD    S +C+TWDA+KPL WR++YGWTAFCGPVGPRGRDSC
Sbjct: 79  SAQNVRATYHIYNPQNVGWDLNAVSAYCSTWDANKPLSWRKKYGWTAFCGPVGPRGRDSC 138

Query: 84  GRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRRIDTNGNGNLRGHLIVNYQFVNC 143
           G+CLRVTNT TGA   VRIVDQC+NGGLDLDVNVFR+IDT+GNGN +GHLIVNYQFV+C
Sbjct: 139 GKCLRVTNTRTGAQTTVRIVDQCSNGGLDLDVNVFRQIDTDGNGNHQGHLIVNYQFVDC 197

[Close]
BLAST of CsaV3_2G004090 vs. ExPASy Swiss-Prot
Match: P09762 (Wound-induced protein WIN2 OS=Solanum tuberosum OX=4113 GN=WIN2 PE=2 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.4e-53
Identity = 89/119 (74.79%), Postives = 103/119 (86.55%), Query Frame = 0 

Query: 24  SATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDSC 83
           SA NVRATYH+YNPQ++ WD    S +C+TWDA+KP  WR +YGWTAFCGPVGPRGRDSC
Sbjct: 78  SAQNVRATYHIYNPQNVGWDLNAVSAYCSTWDANKPYAWRSKYGWTAFCGPVGPRGRDSC 137

Query: 84  GRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRRIDTNGNGNLRGHLIVNYQFVNC 143
           G+CLRVTNT TGA   VRIVDQC+NGGLDLD+NVF++IDT+G GN +GHLIVNYQFVNC
Sbjct: 138 GKCLRVTNTRTGAQTTVRIVDQCSNGGLDLDINVFQQIDTDGVGNQQGHLIVNYQFVNC 196

[Close]
BLAST of CsaV3_2G004090 vs. ExPASy TrEMBL
Match: A0A0A0LIC8 (Barwin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010390 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.3e-78
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0 

Query: 1   MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL 60
           MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL
Sbjct: 1   MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL 60

Query: 61  EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120
           EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR
Sbjct: 61  EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120

Query: 121 IDTNGNGNLRGHLIVNYQFVNC 143
           IDTNGNGNLRGHLIVNYQFVNC
Sbjct: 121 IDTNGNGNLRGHLIVNYQFVNC 142

[Close]
BLAST of CsaV3_2G004090 vs. ExPASy TrEMBL
Match: A0A5D3D4G8 (Pathogenesis-related protein PR-4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001500 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.4e-75
Identity = 137/142 (96.48%), Postives = 139/142 (97.89%), Query Frame = 0 

Query: 1   MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL 60
           M KGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDA+KPL
Sbjct: 1   MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPL 60

Query: 61  EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120
           EWRR+YGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR
Sbjct: 61  EWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120

Query: 121 IDTNGNGNLRGHLIVNYQFVNC 143
           IDTNGNGN RGHL VNYQFVNC
Sbjct: 121 IDTNGNGNFRGHLTVNYQFVNC 142

[Close]
BLAST of CsaV3_2G004090 vs. ExPASy TrEMBL
Match: A0A1S3C3H6 (pathogenesis-related protein PR-4-like OS=Cucumis melo OX=3656 GN=LOC103496070 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.4e-75
Identity = 137/142 (96.48%), Postives = 139/142 (97.89%), Query Frame = 0 

Query: 1   MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL 60
           M KGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDA+KPL
Sbjct: 1   MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPL 60

Query: 61  EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120
           EWRR+YGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR
Sbjct: 61  EWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120

Query: 121 IDTNGNGNLRGHLIVNYQFVNC 143
           IDTNGNGN RGHL VNYQFVNC
Sbjct: 121 IDTNGNGNFRGHLTVNYQFVNC 142

[Close]
BLAST of CsaV3_2G004090 vs. ExPASy TrEMBL
Match: A0A6J1K9X1 (pathogenesis-related protein PR-4-like OS=Cucurbita maxima OX=3661 GN=LOC111493583 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.2e-71
Identity = 129/142 (90.85%), Postives = 135/142 (95.07%), Query Frame = 0 

Query: 1   MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL 60
           M KGS +MIL LALG+LSLANAQSA NVRATYHLYNPQDINWDYLRASVFCATWDA+KP+
Sbjct: 1   MEKGSFLMILALALGILSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPI 60

Query: 61  EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120
           EWRRQYGWTAFCGPVGPRG+ SCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVF+R
Sbjct: 61  EWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKR 120

Query: 121 IDTNGNGNLRGHLIVNYQFVNC 143
           IDTNGNG  RGHLIVNYQFVNC
Sbjct: 121 IDTNGNGVFRGHLIVNYQFVNC 142

[Close]
BLAST of CsaV3_2G004090 vs. ExPASy TrEMBL
Match: A0A6J1G2U1 (pathogenesis-related protein PR-4-like OS=Cucurbita moschata OX=3662 GN=LOC111450306 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 3.5e-71
Identity = 130/142 (91.55%), Postives = 135/142 (95.07%), Query Frame = 0 

Query: 1   MGKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPL 60
           M K SI+MIL LALGVLSLANAQSA NVRATYHLYNPQDINWDYLRASVFCATWDA+KP+
Sbjct: 1   MEKVSILMILALALGVLSLANAQSANNVRATYHLYNPQDINWDYLRASVFCATWDANKPI 60

Query: 61  EWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRR 120
           EWRRQYGWTAFCGPVGPRG+ SCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVF+R
Sbjct: 61  EWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFKR 120

Query: 121 IDTNGNGNLRGHLIVNYQFVNC 143
           IDTNGNG  RGHLIVNYQFVNC
Sbjct: 121 IDTNGNGVFRGHLIVNYQFVNC 142

[Close]
BLAST of CsaV3_2G004090 vs. TAIR 10
Match: AT3G04720.1 (pathogenesis-related 4 )

HSP 1 Score: 188.7 bits (478), Expect = 3.2e-48
Identity = 81/120 (67.50%), Postives = 96/120 (80.00%), Query Frame = 0 

Query: 23  QSATNVRATYHLYNPQDINWDYLRASVFCATWDADKPLEWRRQYGWTAFCGPVGPRGRDS 82
           +SA+NVRATYH YNP   NWD    S +C+TWDADKP  WR +YGWTAFCGP GPRG+ S
Sbjct: 72  ESASNVRATYHFYNPAQNNWDLRAVSAYCSTWDADKPYAWRSKYGWTAFCGPAGPRGQAS 131

Query: 83  CGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRRIDTNGNGNLRGHLIVNYQFVNC 142
           CG+CLRV NT T A+  VRIVDQC+NGGLDLDV +F +IDT+G G  +GHLIV+YQFV+C
Sbjct: 132 CGKCLRVKNTRTNAAVTVRIVDQCSNGGLDLDVAMFNQIDTDGFGYQQGHLIVDYQFVDC 191

The following BLAST results are available for this feature:
BLAST of CsaV3_2G004090 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004139239.12.8e-78100.00pathogenesis-related protein PR-4 [Cucumis sativus] >KGN60804.1 hypothetical pro... [more]
XP_008456018.12.9e-7596.48PREDICTED: pathogenesis-related protein PR-4-like [Cucumis melo] >KAA0063603.1 p... [more]
XP_022999102.12.5e-7190.85pathogenesis-related protein PR-4-like [Cucurbita maxima] >XP_023521168.1 pathog... [more]
XP_022946136.17.3e-7191.55pathogenesis-related protein PR-4-like [Cucurbita moschata][more]
KAG6599312.14.7e-7090.14hypothetical protein SDJN03_09090, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of CsaV3_2G004090 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P320456.2e-5777.95Pathogenesis-related protein P2 OS=Solanum lycopersicum OX=4081 PE=2 SV=1[more]
P290638.1e-5771.53Pathogenesis-related protein PR-4B OS=Nicotiana tabacum OX=4097 PE=2 SV=1[more]
P290621.4e-5671.53Pathogenesis-related protein PR-4A OS=Nicotiana tabacum OX=4097 PE=2 SV=1[more]
P097611.5e-5577.31Wound-induced protein WIN1 OS=Solanum tuberosum OX=4113 GN=WIN1 PE=2 SV=1[more]
P097621.4e-5374.79Wound-induced protein WIN2 OS=Solanum tuberosum OX=4113 GN=WIN2 PE=2 SV=1[more]
BLAST of CsaV3_2G004090 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LIC81.3e-78100.00Barwin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010390 PE=4... [more]
A0A5D3D4G81.4e-7596.48Pathogenesis-related protein PR-4-like OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A1S3C3H61.4e-7596.48pathogenesis-related protein PR-4-like OS=Cucumis melo OX=3656 GN=LOC103496070 P... [more]
A0A6J1K9X11.2e-7190.85pathogenesis-related protein PR-4-like OS=Cucurbita maxima OX=3661 GN=LOC1114935... [more]
A0A6J1G2U13.5e-7191.55pathogenesis-related protein PR-4-like OS=Cucurbita moschata OX=3662 GN=LOC11145... [more]
BLAST of CsaV3_2G004090 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G04720.13.2e-4867.50pathogenesis-related 4 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001153Barwin domainPRINTSPR00602BARWINcoord: 58..76
score: 78.95
coord: 77..95
score: 71.58
coord: 96..114
score: 77.19
coord: 117..141
score: 67.2
IPR001153Barwin domainPFAMPF00967Barwincoord: 24..142
e-value: 4.5E-57
score: 191.1
IPR001153Barwin domainPROSITEPS51174BARWIN_3coord: 23..142
score: 79.466721
IPR036908RlpA-like domain superfamilyGENE3D2.40.40.10coord: 23..142
e-value: 6.7E-55
score: 186.1
IPR036908RlpA-like domain superfamilySUPERFAMILY50685Barwin-like endoglucanasescoord: 23..142
IPR044301Pathogenesis-related protein-4PANTHERPTHR46351WOUND-INDUCED PROTEIN WIN2coord: 6..142
NoneNo IPR availablePANTHERPTHR46351:SF6PATHOGENESIS-RELATED PROTEIN PR-4Acoord: 6..142
IPR018226Barwin, conserved sitePROSITEPS00771BARWIN_1coord: 83..91
IPR018226Barwin, conserved sitePROSITEPS00772BARWIN_2coord: 135..142

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G004090.1CsaV3_2G004090.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006952 defense response
biological_process GO:0042742 defense response to bacterium
biological_process GO:0050832 defense response to fungus
molecular_function GO:0004540 ribonuclease activity