CsaV3_2G003540 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACGATTCCAACGAACACAAAGGAAACTCCTCACCGTCCAGTCTGAAAGAGATGCTCAAATCTTCTCTATGTTTATCTTGTTGCCTTCGTAAGCACCGGAATGGCCATCATCATCTTCATCACCACCATCATCATCACCACCGGCGGATGATGTCTATTTCGTCCGACGGTGAATCGTCGCCTGGACCGCTCATGAGATGTTCTTCTGCAAAGGATAAGTCCAGATCTCGTGAGTGTCATGATATTAAAGATCGACTTCCGAGTTTCATTTCCCGACTCGGTCGCCATGGACGTCGTCACTCTGCTTCCGCTGATTTCCATTACGATGCACTTAGTTATTCGCTTAATTTCGATGAAGGATATGATGAAGGTCATGTTGATGATGATTTTCCTCTCAGGAATTTCTCCTCTAGGTTACCGGCTTCTCCTCCGAAATCCTCACCGTCTACGACTACTGCATCGAGGGAGATGA ATGGACGATTCCAACGAACACAAAGGAAACTCCTCACCGTCCAGTCTGAAAGAGATGCTCAAATCTTCTCTATGTTTATCTTGTTGCCTTCGTAAGCACCGGAATGGCCATCATCATCTTCATCACCACCATCATCATCACCACCGGCGGATGATGTCTATTTCGTCCGACGGTGAATCGTCGCCTGGACCGCTCATGAGATGTTCTTCTGCAAAGGATAAGTCCAGATCTCGAATTTCTCCTCTAGGTTACCGGCTTCTCCTCCGAAATCCTCACCGTCTACGACTACTGCATCGAGGGAGATGA ATGGACGATTCCAACGAACACAAAGGAAACTCCTCACCGTCCAGTCTGAAAGAGATGCTCAAATCTTCTCTATGTTTATCTTGTTGCCTTCGTAAGCACCGGAATGGCCATCATCATCTTCATCACCACCATCATCATCACCACCGGCGGATGATGTCTATTTCGTCCGACGGTGAATCGTCGCCTGGACCGCTCATGAGATGTTCTTCTGCAAAGGATAAGTCCAGATCTCGAATTTCTCCTCTAGGTTACCGGCTTCTCCTCCGAAATCCTCACCGTCTACGACTACTGCATCGAGGGAGATGA MDDSNEHKGNSSPSSLKEMLKSSLCLSCCLRKHRNGHHHLHHHHHHHHRRMMSISSDGESSPGPLMRCSSAKDKSRSRISPLGYRLLLRNPHRLRLLHRGR* Homology
BLAST of CsaV3_2G003540 vs. NCBI nr
Match: KAE8651542.1 (hypothetical protein Csa_019176 [Cucumis sativus]) HSP 1 Score: 203.0 bits (515), Expect = 1.2e-48 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0
BLAST of CsaV3_2G003540 vs. NCBI nr
Match: XP_011650096.1 (NEDD8-specific protease 1 [Cucumis sativus]) HSP 1 Score: 157.9 bits (398), Expect = 4.6e-35 Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0
BLAST of CsaV3_2G003540 vs. NCBI nr
Match: XP_038890730.1 (homeobox protein MOX-2 [Benincasa hispida]) HSP 1 Score: 141.0 bits (354), Expect = 5.8e-30 Identity = 81/99 (81.82%), Postives = 84/99 (84.85%), Query Frame = 0
BLAST of CsaV3_2G003540 vs. NCBI nr
Match: XP_008460859.1 (PREDICTED: uncharacterized protein LOC103499607 [Cucumis melo]) HSP 1 Score: 134.8 bits (338), Expect = 4.2e-28 Identity = 71/81 (87.65%), Postives = 73/81 (90.12%), Query Frame = 0
BLAST of CsaV3_2G003540 vs. NCBI nr
Match: KAA0063552.1 (uncharacterized protein E6C27_scaffold329G00590 [Cucumis melo var. makuwa] >TYJ97879.1 uncharacterized protein E5676_scaffold285G00930 [Cucumis melo var. makuwa]) HSP 1 Score: 134.8 bits (338), Expect = 4.2e-28 Identity = 71/81 (87.65%), Postives = 73/81 (90.12%), Query Frame = 0
BLAST of CsaV3_2G003540 vs. ExPASy TrEMBL
Match: A0A0A0LL60 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009350 PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 2.2e-35 Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0
BLAST of CsaV3_2G003540 vs. ExPASy TrEMBL
Match: A0A5D3BFQ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00930 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 2.0e-28 Identity = 71/81 (87.65%), Postives = 73/81 (90.12%), Query Frame = 0
BLAST of CsaV3_2G003540 vs. ExPASy TrEMBL
Match: A0A1S3CDF1 (uncharacterized protein LOC103499607 OS=Cucumis melo OX=3656 GN=LOC103499607 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 2.0e-28 Identity = 71/81 (87.65%), Postives = 73/81 (90.12%), Query Frame = 0
BLAST of CsaV3_2G003540 vs. ExPASy TrEMBL
Match: A0A6J1FDP2 (uncharacterized protein LOC111444439 OS=Cucurbita moschata OX=3662 GN=LOC111444439 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 6.9e-21 Identity = 60/81 (74.07%), Postives = 65/81 (80.25%), Query Frame = 0
BLAST of CsaV3_2G003540 vs. ExPASy TrEMBL
Match: A0A6J1HQB7 (uncharacterized protein LOC111465710 OS=Cucurbita maxima OX=3661 GN=LOC111465710 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 1.2e-20 Identity = 60/81 (74.07%), Postives = 65/81 (80.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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