CsaV3_2G002540 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G002540
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr2: 1094483 .. 1094740 (-)
RNA-Seq ExpressionCsaV3_2G002540
SyntenyCsaV3_2G002540
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTTTAGGAGTGAATCTAATGGGTTGGAGGGCAGCGGGAGAGACGAGGAGAGATGCATGGGGTGGTCCACGGTGGGGGGAGCCAAAGGCTGACACACACAACCACTTTGGGGTGAGAAAAAGTGAGCCAACTAGACCCAGGCTGTCGACCGGTCCACTGCCTCCAATCATGGAAATGATTTTCGCACCACGTGGCGATCTGTCATTCCACTTTTGCTTTTCACTCACCTTCAAGTTTCTCCAAATAATGGATAA

mRNA sequence

ATGGAGTTTAGGAGTGAATCTAATGGGTTGGAGGGCAGCGGGAGAGACGAGGAGAGATGCATGGGGTGGTCCACGGCTGTCGACCGGTCCACTGCCTCCAATCATGGAAATGATTTTCGCACCACGTGGCGATCTGTCATTCCACTTTTGCTTTTCACTCACCTTCAAGTTTCTCCAAATAATGGATAA

Coding sequence (CDS)

ATGGAGTTTAGGAGTGAATCTAATGGGTTGGAGGGCAGCGGGAGAGACGAGGAGAGATGCATGGGGTGGTCCACGGCTGTCGACCGGTCCACTGCCTCCAATCATGGAAATGATTTTCGCACCACGTGGCGATCTGTCATTCCACTTTTGCTTTTCACTCACCTTCAAGTTTCTCCAAATAATGGATAA

Protein sequence

MEFRSESNGLEGSGRDEERCMGWSTAVDRSTASNHGNDFRTTWRSVIPLLLFTHLQVSPNNG*
Homology
[Close]
BLAST of CsaV3_2G002540 vs. NCBI nr
Match: KGN60645.1 (hypothetical protein Csa_019287 [Cucumis sativus])

HSP 1 Score: 133.7 bits (335), Expect = 5.7e-28
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0 

Query: 1  MEFRSESNGLEGSGRDEERCMGWSTAVDRSTASNHGNDFRTTWRSVIPLLLFTHLQVSPN 60
          MEFRSESNGLEGSGRDEERCMGWSTAVDRSTASNHGNDFRTTWRSVIPLLLFTHLQVSPN
Sbjct: 1  MEFRSESNGLEGSGRDEERCMGWSTAVDRSTASNHGNDFRTTWRSVIPLLLFTHLQVSPN 60

Query: 61 NG 63
          NG
Sbjct: 61 NG 62

[Close]
BLAST of CsaV3_2G002540 vs. ExPASy TrEMBL
Match: A0A0A0LF38 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G005910 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.8e-28
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0 

Query: 1  MEFRSESNGLEGSGRDEERCMGWSTAVDRSTASNHGNDFRTTWRSVIPLLLFTHLQVSPN 60
          MEFRSESNGLEGSGRDEERCMGWSTAVDRSTASNHGNDFRTTWRSVIPLLLFTHLQVSPN
Sbjct: 1  MEFRSESNGLEGSGRDEERCMGWSTAVDRSTASNHGNDFRTTWRSVIPLLLFTHLQVSPN 60

Query: 61 NG 63
          NG
Sbjct: 61 NG 62

The following BLAST results are available for this feature:
BLAST of CsaV3_2G002540 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN60645.15.7e-28100.00hypothetical protein Csa_019287 [Cucumis sativus][more]
BLAST of CsaV3_2G002540 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G002540 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LF382.8e-28100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G005910 PE=4 SV=1[more]
BLAST of CsaV3_2G002540 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G002540.1CsaV3_2G002540.1mRNA