CsaV3_2G002360 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G002360
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr2: 952213 .. 952415 (+)
RNA-Seq ExpressionCsaV3_2G002360
SyntenyCsaV3_2G002360
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGCCGGCGCCGGTACAGCTAAATCTACAAAATTCACTCGGTAATTTCGTCGAACACCTTCCGAGCAAAAAAAATAAAGCTGTAAAACTCCGGTCACCCGTGCCGGCGCCGGTGTACGATCACTTTATAACTATTGGGCAACCCGATATTCAAACCGGAAAATCGCTGGCAGCGTCCGAAAAATCAACTGAGTTCTGTCG

mRNA sequence

ATGCTGCCGGCGCCGGTACAGCTAAATCTACAAAATTCACTCGGTAATTTCGTCGAACACCTTCCGAGCAAAAAAAATAAAGCTGTAAAACTCCGGTCACCCGTGCCGGCGCCGGTGTACGATCACTTTATAACTATTGGGCAACCCGATATTCAAACCGGAAAATCGCTGGCAGCGTCCGAAAAATCAACTGAGTTCTGTCG

Coding sequence (CDS)

ATGCTGCCGGCGCCGGTACAGCTAAATCTACAAAATTCACTCGGTAATTTCGTCGAACACCTTCCGAGCAAAAAAAATAAAGCTGTAAAACTCCGGTCACCCGTGCCGGCGCCGGTGTACGATCACTTTATAACTATTGGGCAACCCGATATTCAAACCGGAAAATCGCTGGCAGCGTCCGAAAAATCAACTGAGTTCTGTCG

Protein sequence

MLPAPVQLNLQNSLGNFVEHLPSKKNKAVKLRSPVPAPVYDHFITIGQPDIQTGKSLAASEKSTEFCX
Homology
[Close]
BLAST of CsaV3_2G002360 vs. NCBI nr
Match: KAE8651517.1 (hypothetical protein Csa_019416, partial [Cucumis sativus])

HSP 1 Score: 139.8 bits (351), Expect = 8.6e-30
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 1  MLPAPVQLNLQNSLGNFVEHLPSKKNKAVKLRSPVPAPVYDHFITIGQPDIQTGKSLAAS 60
          MLPAPVQLNLQNSLGNFVEHLPSKKNKAVKLRSPVPAPVYDHFITIGQPDIQTGKSLAAS
Sbjct: 1  MLPAPVQLNLQNSLGNFVEHLPSKKNKAVKLRSPVPAPVYDHFITIGQPDIQTGKSLAAS 60

Query: 61 EKSTEFC 68
          EKSTEFC
Sbjct: 61 EKSTEFC 67

[Close]
BLAST of CsaV3_2G002360 vs. ExPASy TrEMBL
Match: A0A0A0LFW1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004770 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 4.2e-30
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 1  MLPAPVQLNLQNSLGNFVEHLPSKKNKAVKLRSPVPAPVYDHFITIGQPDIQTGKSLAAS 60
          MLPAPVQLNLQNSLGNFVEHLPSKKNKAVKLRSPVPAPVYDHFITIGQPDIQTGKSLAAS
Sbjct: 1  MLPAPVQLNLQNSLGNFVEHLPSKKNKAVKLRSPVPAPVYDHFITIGQPDIQTGKSLAAS 60

Query: 61 EKSTEFC 68
          EKSTEFC
Sbjct: 61 EKSTEFC 67

The following BLAST results are available for this feature:
BLAST of CsaV3_2G002360 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8651517.18.6e-30100.00hypothetical protein Csa_019416, partial [Cucumis sativus][more]
BLAST of CsaV3_2G002360 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G002360 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LFW14.2e-30100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004770 PE=4 SV=1[more]
BLAST of CsaV3_2G002360 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G002360.1CsaV3_2G002360.1mRNA