CsaV3_2G002340 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G002340
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr2: 943533 .. 943784 (+)
RNA-Seq ExpressionCsaV3_2G002340
SyntenyCsaV3_2G002340
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGACGCGGTGCACCACAATAACATGGGCCCCTCATCAGCGCCGACGATCCAGCCGAAGGAACGCGTGGGACCCGCTTCCAAACTGGCTATTGGTTGTCGCTTTCTTAGCGTGGGGGCGCTGATATGATCTGACCTGGCATAGGTTTCTCCACCGTCGGATCATCTTTGATGATGCTGGATCAGCATCATGTACGATGTGGACGCCCGCAGCGGATCGAGATCGAAGTGACGATGCTTTGACTTGGTAA

mRNA sequence

ATGTGGACGCGGTGCACCACAATAACATGGGCCCCTCATCAGCGCCGACGATCCAGCCGAAGGAACGCGTGGGACCCGCTTCCAAACTGGCTATTGGTTGTCGCTTTCTTAGCGTTTCTCCACCGTCGGATCATCTTTGATGATGCTGGATCAGCATCATGTACGATGTGGACGCCCGCAGCGGATCGAGATCGAAGTGACGATGCTTTGACTTGGTAA

Coding sequence (CDS)

ATGTGGACGCGGTGCACCACAATAACATGGGCCCCTCATCAGCGCCGACGATCCAGCCGAAGGAACGCGTGGGACCCGCTTCCAAACTGGCTATTGGTTGTCGCTTTCTTAGCGTTTCTCCACCGTCGGATCATCTTTGATGATGCTGGATCAGCATCATGTACGATGTGGACGCCCGCAGCGGATCGAGATCGAAGTGACGATGCTTTGACTTGGTAA

Protein sequence

MWTRCTTITWAPHQRRRSSRRNAWDPLPNWLLVVAFLAFLHRRIIFDDAGSASCTMWTPAADRDRSDDALTW*
Homology
[Close]
BLAST of CsaV3_2G002340 vs. NCBI nr
Match: KGN60626.1 (hypothetical protein Csa_019193 [Cucumis sativus])

HSP 1 Score: 162.2 bits (409), Expect = 1.7e-36
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0 

Query: 1  MWTRCTTITWAPHQRRRSSRRNAWDPLPNWLLVVAFLAFLHRRIIFDDAGSASCTMWTPA 60
          MWTRCTTITWAPHQRRRSSRRNAWDPLPNWLLVVAFLAFLHRRIIFDDAGSASCTMWTPA
Sbjct: 1  MWTRCTTITWAPHQRRRSSRRNAWDPLPNWLLVVAFLAFLHRRIIFDDAGSASCTMWTPA 60

Query: 61 ADRDRSDDALTW 73
          ADRDRSDDALTW
Sbjct: 61 ADRDRSDDALTW 72

[Close]
BLAST of CsaV3_2G002340 vs. ExPASy TrEMBL
Match: A0A0A0LKU6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004750 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 8.4e-37
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0 

Query: 1  MWTRCTTITWAPHQRRRSSRRNAWDPLPNWLLVVAFLAFLHRRIIFDDAGSASCTMWTPA 60
          MWTRCTTITWAPHQRRRSSRRNAWDPLPNWLLVVAFLAFLHRRIIFDDAGSASCTMWTPA
Sbjct: 1  MWTRCTTITWAPHQRRRSSRRNAWDPLPNWLLVVAFLAFLHRRIIFDDAGSASCTMWTPA 60

Query: 61 ADRDRSDDALTW 73
          ADRDRSDDALTW
Sbjct: 61 ADRDRSDDALTW 72

The following BLAST results are available for this feature:
BLAST of CsaV3_2G002340 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN60626.11.7e-36100.00hypothetical protein Csa_019193 [Cucumis sativus][more]
BLAST of CsaV3_2G002340 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G002340 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LKU68.4e-37100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004750 PE=4 SV=1[more]
BLAST of CsaV3_2G002340 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G002340.1CsaV3_2G002340.1mRNA