CsaV3_1G046630 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G046630
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionAAI domain-containing protein
Locationchr1: 32595659 .. 32595922 (+)
RNA-Seq ExpressionCsaV3_1G046630
SyntenyCsaV3_1G046630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGGCATATGGCTGTTGGTGGTTGTGATCAATGAAACTCAGGTGTCCAAGGCAGTGAAATGCGACCCAGGGGAGTTGAGACCATGTCATTTGTCCTTCACAATGTCGATGGAGCCATCGTCGGCTTGTTGCAAGAAGGTGCTGCAGCATAGGACATGCTATTGTGAATATAGTAAAAATCCAAAGACTCAACCTTATTTAAAATATGATGCCACTCAAAGGATCATTTCTGATTGTGGCGTTGCAATCCCAACTTGCTAA

mRNA sequence

ATGAGAGGCATATGGCTGTTGGTGGTTGTGATCAATGAAACTCAGGTGTCCAAGGCAGTGAAATGCGACCCAGGGGAGTTGAGACCATGTCATTTGTCCTTCACAATGTCGATGGAGCCATCGTCGGCTTGTTGCAAGAAGGTGCTGCAGCATAGGACATGCTATTGTGAATATAGTAAAAATCCAAAGACTCAACCTTATTTAAAATATGATGCCACTCAAAGGATCATTTCTGATTGTGGCGTTGCAATCCCAACTTGCTAA

Coding sequence (CDS)

ATGAGAGGCATATGGCTGTTGGTGGTTGTGATCAATGAAACTCAGGTGTCCAAGGCAGTGAAATGCGACCCAGGGGAGTTGAGACCATGTCATTTGTCCTTCACAATGTCGATGGAGCCATCGTCGGCTTGTTGCAAGAAGGTGCTGCAGCATAGGACATGCTATTGTGAATATAGTAAAAATCCAAAGACTCAACCTTATTTAAAATATGATGCCACTCAAAGGATCATTTCTGATTGTGGCGTTGCAATCCCAACTTGCTAA

Protein sequence

MRGIWLLVVVINETQVSKAVKCDPGELRPCHLSFTMSMEPSSACCKKVLQHRTCYCEYSKNPKTQPYLKYDATQRIISDCGVAIPTC*
Homology
BLAST of CsaV3_1G046630 vs. NCBI nr
Match: KGN66906.1 (hypothetical protein Csa_006987 [Cucumis sativus])

HSP 1 Score: 190.7 bits (483), Expect = 5.5e-45
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0

Query: 1  MRGIWLLVVVINETQVSKAVKCDPGELRPCHLSFTMSMEPSSACCKKVLQHRTCYCEYSK 60
          MRGIWLLVVVINETQVSKAVKCDPGELRPCHLSFTMSMEPSSACCKKVLQHRTCYCEYSK
Sbjct: 1  MRGIWLLVVVINETQVSKAVKCDPGELRPCHLSFTMSMEPSSACCKKVLQHRTCYCEYSK 60

Query: 61 NPKTQPYLKYDATQRIISDCGVAIPTC 88
          NPKTQPYLKYDATQRIISDCGVAIPTC
Sbjct: 61 NPKTQPYLKYDATQRIISDCGVAIPTC 87

BLAST of CsaV3_1G046630 vs. NCBI nr
Match: KAE8648143.1 (hypothetical protein Csa_023893, partial [Cucumis sativus])

HSP 1 Score: 98.6 bits (244), Expect = 2.9e-17
Identity = 39/82 (47.56%), Postives = 56/82 (68.29%), Query Frame = 0

Query: 6  LLVVVINETQVSKAVKCDPGELRPCHLSFTMSMEPSSACCKKVLQHRTCYCEYSKNPKTQ 65
          LL V + E Q++ A  CDP E+R C  ++T S  PSS+CC  V +HR+CYC+Y KNP  Q
Sbjct: 2  LLAVFVKEAQLANAATCDPNEMRVCMWAYTTSTAPSSSCCDMVRKHRSCYCQYKKNPTFQ 61

Query: 66 PYLKYDATQRIISDCGVAIPTC 88
           YL+   T++II+ CG+ +P+C
Sbjct: 62 SYLQSPTTKKIIAQCGITLPSC 83

BLAST of CsaV3_1G046630 vs. NCBI nr
Match: KAE8648147.1 (hypothetical protein Csa_023900, partial [Cucumis sativus])

HSP 1 Score: 92.8 bits (229), Expect = 1.6e-15
Identity = 36/73 (49.32%), Postives = 51/73 (69.86%), Query Frame = 0

Query: 15 QVSKAVKCDPGELRPCHLSFTMSMEPSSACCKKVLQHRTCYCEYSKNPKTQPYLKYDATQ 74
          Q++ A  CDP E+R C  ++T S  PSS+CC  V +HR+CYC+Y KNP  Q YL+   T+
Sbjct: 2  QLANAATCDPNEMRVCMWAYTTSTAPSSSCCDMVRKHRSCYCQYKKNPTFQSYLQSPTTK 61

Query: 75 RIISDCGVAIPTC 88
          +IIS CG+ +P+C
Sbjct: 62 KIISQCGITLPSC 74

BLAST of CsaV3_1G046630 vs. NCBI nr
Match: KAF7130038.1 (hypothetical protein RHSIM_Rhsim10G0071300 [Rhododendron simsii])

HSP 1 Score: 88.2 bits (217), Expect = 3.9e-14
Identity = 37/82 (45.12%), Postives = 55/82 (67.07%), Query Frame = 0

Query: 6   LLVVVINETQVSKAVKCDPGELRPCHLSFTMSMEPSSACCKKVLQHRTCYCEYSKNPKTQ 65
           ++VVV+ E +V+KAV C+P ELRPC  +FT    PS+ CC K+ + + C C Y KNP  +
Sbjct: 24  VVVVVLAEARVTKAVTCNPLELRPCLGAFTSGQPPSAGCCDKLREQKPCLCGYIKNPDLK 83

Query: 66  PYLKYDATQRIISDCGVAIPTC 88
            ++   +T+R++S CGV  PTC
Sbjct: 84  QFVNSPSTRRVVSACGVPYPTC 105

BLAST of CsaV3_1G046630 vs. NCBI nr
Match: KAG5527969.1 (hypothetical protein RHGRI_028783 [Rhododendron griersonianum])

HSP 1 Score: 87.0 bits (214), Expect = 8.6e-14
Identity = 39/82 (47.56%), Postives = 51/82 (62.20%), Query Frame = 0

Query: 6  LLVVVINETQVSKAVKCDPGELRPCHLSFTMSMEPSSACCKKVLQHRTCYCEYSKNPKTQ 65
          ++VVV+ E QV++AV C P ELR C  +F  S +PSS CC K+ +   C C Y KNP   
Sbjct: 14 VVVVVLAEAQVAEAVTCSPLELRSCMGAFMSSQKPSSHCCDKLNEQTPCLCGYIKNPNLS 73

Query: 66 PYLKYDATQRIISDCGVAIPTC 88
           Y+     QR+ SDCGV +PTC
Sbjct: 74 QYVNSPNAQRVASDCGVTLPTC 95

BLAST of CsaV3_1G046630 vs. ExPASy Swiss-Prot
Match: A2XBN5 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=LTP-2 PE=3 SV=2)

HSP 1 Score: 59.3 bits (142), Expect = 2.5e-08
Identity = 20/66 (30.30%), Postives = 39/66 (59.09%), Query Frame = 0

Query: 22 CDPGELRPCHLSFTMSMEPSSACCKKVLQHRTCYCEYSKNPKTQPYLKYDATQRIISDCG 81
          C+ G+L  C  +      P++ACC  +   + C+C+++K+P+   Y+     ++ +S CG
Sbjct: 30 CNAGQLTVCAGAIAGGARPTAACCSSLRAQQGCFCQFAKDPRYGRYVNSPNARKAVSSCG 89

Query: 82 VAIPTC 88
          +A+PTC
Sbjct: 90 IALPTC 95

BLAST of CsaV3_1G046630 vs. ExPASy Swiss-Prot
Match: P82900 (Non-specific lipid-transfer protein 2G OS=Triticum aestivum OX=4565 PE=1 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 1.1e-06
Identity = 21/84 (25.00%), Postives = 40/84 (47.62%), Query Frame = 0

Query: 4  IWLLVVVINETQVSKAVKCDPGELRPCHLSFTMSMEPSSACCKKVLQHRTCYCEYSKNPK 63
          + L +VV+          C   +L  C  +     +PS  CC  +   + C+C+Y+K+P 
Sbjct: 13 LMLALVVLAAAPGGARAACQASQLAVCASAILSGAKPSGECCGNLRAQQGCFCQYAKDPT 72

Query: 64 TQPYLKYDATQRIISDCGVAIPTC 88
             Y++    +  ++ CG+A+P C
Sbjct: 73 YGQYIRSPHARDTLTSCGLAVPHC 96

BLAST of CsaV3_1G046630 vs. ExPASy Swiss-Prot
Match: P82901 (Non-specific lipid-transfer protein 2P OS=Triticum aestivum OX=4565 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 4.0e-06
Identity = 18/66 (27.27%), Postives = 33/66 (50.00%), Query Frame = 0

Query: 22 CDPGELRPCHLSFTMSMEPSSACCKKVLQHRTCYCEYSKNPKTQPYLKYDATQRIISDCG 81
          C   +L  C  +     +PS  CC  +   + C+C+Y+K+P    Y++    +  +  CG
Sbjct: 2  CQASQLAVCASAILSGAKPSGECCGNLRAQQPCFCQYAKDPTYGQYIRSPHARDTLQSCG 61

Query: 82 VAIPTC 88
          +A+P C
Sbjct: 62 LAVPHC 67

BLAST of CsaV3_1G046630 vs. ExPASy TrEMBL
Match: A0A0A0M3W7 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G711160 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 2.7e-45
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0

Query: 1  MRGIWLLVVVINETQVSKAVKCDPGELRPCHLSFTMSMEPSSACCKKVLQHRTCYCEYSK 60
          MRGIWLLVVVINETQVSKAVKCDPGELRPCHLSFTMSMEPSSACCKKVLQHRTCYCEYSK
Sbjct: 1  MRGIWLLVVVINETQVSKAVKCDPGELRPCHLSFTMSMEPSSACCKKVLQHRTCYCEYSK 60

Query: 61 NPKTQPYLKYDATQRIISDCGVAIPTC 88
          NPKTQPYLKYDATQRIISDCGVAIPTC
Sbjct: 61 NPKTQPYLKYDATQRIISDCGVAIPTC 87

BLAST of CsaV3_1G046630 vs. ExPASy TrEMBL
Match: A0A5C7IL66 (AAI domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_004968 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.2e-13
Identity = 36/82 (43.90%), Postives = 52/82 (63.41%), Query Frame = 0

Query: 6  LLVVVINETQVSKAVKCDPGELRPCHLSFTMSMEPSSACCKKVLQHRTCYCEYSKNPKTQ 65
          +LVV+ +E +V+KAV C+P EL PC  + T S  PSS CC KV + R C C Y K+P  +
Sbjct: 16 MLVVLSSEVRVAKAVTCNPTELSPCMAAITSSAPPSSTCCSKVREQRPCLCGYIKDPNLK 75

Query: 66 PYLKYDATQRIISDCGVAIPTC 88
           Y+     ++++S CGV+ P C
Sbjct: 76 QYVNSPNARKVVSTCGVSYPQC 97

BLAST of CsaV3_1G046630 vs. ExPASy TrEMBL
Match: A0A6I9SZ88 (non-specific lipid-transfer protein 2-like OS=Sesamum indicum OX=4182 GN=LOC105160581 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 2.1e-13
Identity = 32/82 (39.02%), Postives = 52/82 (63.41%), Query Frame = 0

Query: 6  LLVVVINETQVSKAVKCDPGELRPCHLSFTMSMEPSSACCKKVLQHRTCYCEYSKNPKTQ 65
          +LV+++ E +V+ AV C+P +L PC  + T S +PS+ACC K+ + R C C+Y KNP  Q
Sbjct: 15 VLVLILGEVEVTNAVTCNPLQLSPCASAITSSSKPSAACCAKIKEQRPCLCQYMKNPNLQ 74

Query: 66 PYLKYDATQRIISDCGVAIPTC 88
           ++K    +++ + CG   P C
Sbjct: 75 KFIKSPGAKKVANSCGTPYPRC 96

BLAST of CsaV3_1G046630 vs. ExPASy TrEMBL
Match: A0A5C7ILK8 (AAI domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_004965 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.7e-13
Identity = 35/82 (42.68%), Postives = 52/82 (63.41%), Query Frame = 0

Query: 6  LLVVVINETQVSKAVKCDPGELRPCHLSFTMSMEPSSACCKKVLQHRTCYCEYSKNPKTQ 65
          ++VV+ +E +V+KAV C+P EL PC  + T S  PSS CC KV + R C C Y K+P  +
Sbjct: 16 MVVVLSSEVRVAKAVTCNPTELSPCMAAITSSAPPSSTCCSKVREQRPCLCGYIKDPNLK 75

Query: 66 PYLKYDATQRIISDCGVAIPTC 88
           Y+     ++++S CGV+ P C
Sbjct: 76 QYVNSPNARKVVSTCGVSYPQC 97

BLAST of CsaV3_1G046630 vs. ExPASy TrEMBL
Match: A0A6J1D4R3 (non-specific lipid-transfer protein 2-like OS=Momordica charantia OX=3673 GN=LOC111016938 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 3.5e-13
Identity = 37/88 (42.05%), Postives = 53/88 (60.23%), Query Frame = 0

Query: 4  IWLLVVVINE----TQVSKAVKCDPGELRPCHLSFTMSMEPSSACCKKVLQHRTCYCEYS 63
          +WLLVV I       +V++AV C P EL PC  +    M PSSACC K+ + + C C Y 
Sbjct: 11 LWLLVVAIAALLIGARVTEAVTCSPTELSPCVTAILSGMPPSSACCSKLREQKPCLCGYL 70

Query: 64 KNPKTQPYLKYDATQRIISDCGVAIPTC 88
          +NP  +PY++    +++ S CGVA P+C
Sbjct: 71 RNPNLKPYVQSPNAKKVASACGVAFPSC 98

BLAST of CsaV3_1G046630 vs. TAIR 10
Match: AT1G73780.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 67.8 bits (164), Expect = 5.0e-12
Identity = 29/84 (34.52%), Postives = 44/84 (52.38%), Query Frame = 0

Query: 4  IWLLVVVINETQVSKAVKCDPGELRPCHLSFTMSMEPSSACCKKVLQHRTCYCEYSKNPK 63
          I L+++V  E +V+    C+P +L PC  +     EPS  CC KV + + C C+Y KNP 
Sbjct: 15 ILLILIVAQENRVAAVDPCNPAQLSPCLETIMKGSEPSDLCCSKVKEQQHCICQYLKNPN 74

Query: 64 TQPYLKYDATQRIISDCGVAIPTC 88
           + +L     + I +DC    P C
Sbjct: 75 FKSFLNSPNAKIIATDCHCPYPKC 98

BLAST of CsaV3_1G046630 vs. TAIR 10
Match: AT1G66850.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 65.1 bits (157), Expect = 3.3e-11
Identity = 25/68 (36.76%), Postives = 40/68 (58.82%), Query Frame = 0

Query: 20  VKCDPGELRPCHLSFTMSMEPSSACCKKVLQHRTCYCEYSKNPKTQPYLKYDATQRIISD 79
           V CD  +L+PC  + T   +PS ACC K+ + ++C C ++KNP    Y+     ++++  
Sbjct: 35  VTCDARQLQPCLAAITGGGQPSGACCAKLTEQQSCLCGFAKNPAFAQYISSPNARKVLLA 94

Query: 80  CGVAIPTC 88
           C VA PTC
Sbjct: 95  CNVAYPTC 102

BLAST of CsaV3_1G046630 vs. TAIR 10
Match: AT1G43667.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 58.9 bits (141), Expect = 2.3e-09
Identity = 24/70 (34.29%), Postives = 41/70 (58.57%), Query Frame = 0

Query: 18 KAVKCDPGELRPCHLSFTMSMEPSSACCKKVLQHRTCYCEYSKNPKTQPYLKYDATQRII 77
          K V C   EL+PC  S     +PS+ CC+K+ +  +C+C+Y +NP+   Y+   A ++I+
Sbjct: 31 KKVACTVTELQPCLPSVIDGSQPSTQCCEKLKEQNSCFCDYLQNPQFSQYI--TAAKQIL 90

Query: 78 SDCGVAIPTC 88
          + C +  P C
Sbjct: 91 AACKIPYPNC 98

BLAST of CsaV3_1G046630 vs. TAIR 10
Match: AT5G38160.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 58.9 bits (141), Expect = 2.3e-09
Identity = 24/68 (35.29%), Postives = 36/68 (52.94%), Query Frame = 0

Query: 20  VKCDPGELRPCHLSFTMSMEPSSACCKKVLQHRTCYCEYSKNPKTQPYLKYDATQRIISD 79
           V CD  +L  C  + +    PS+ CC K+ +H TC C Y +NP    Y+     ++ ++ 
Sbjct: 36  VTCDATQLSSCVTAVSTGAPPSTDCCGKLKEHETCLCTYIQNPLYSSYVTSPNARKTLAA 95

Query: 80  CGVAIPTC 88
           C VA PTC
Sbjct: 96  CDVAYPTC 103

BLAST of CsaV3_1G046630 vs. TAIR 10
Match: AT1G07747.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 58.2 bits (139), Expect = 4.0e-09
Identity = 23/74 (31.08%), Postives = 39/74 (52.70%), Query Frame = 0

Query: 14 TQVSKAVKCDPGELRPCHLSFTMSMEPSSACCKKVLQHRTCYCEYSKNPKTQPYLKYDAT 73
          T+  +   C   +L+ C         PS+ CC K+   ++C+CEY KNP   PY+   + 
Sbjct: 21 TKAEEKAACVVTDLKACLPDIIGETPPSTKCCTKLKDKKSCFCEYLKNPLIAPYM--TSA 80

Query: 74 QRIISDCGVAIPTC 88
          ++++  CGV +P C
Sbjct: 81 KQVLEACGVPVPVC 92

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN66906.15.5e-45100.00hypothetical protein Csa_006987 [Cucumis sativus][more]
KAE8648143.12.9e-1747.56hypothetical protein Csa_023893, partial [Cucumis sativus][more]
KAE8648147.11.6e-1549.32hypothetical protein Csa_023900, partial [Cucumis sativus][more]
KAF7130038.13.9e-1445.12hypothetical protein RHSIM_Rhsim10G0071300 [Rhododendron simsii][more]
KAG5527969.18.6e-1447.56hypothetical protein RHGRI_028783 [Rhododendron griersonianum][more]
Match NameE-valueIdentityDescription
A2XBN52.5e-0830.30Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=... [more]
P829001.1e-0625.00Non-specific lipid-transfer protein 2G OS=Triticum aestivum OX=4565 PE=1 SV=2[more]
P829014.0e-0627.27Non-specific lipid-transfer protein 2P OS=Triticum aestivum OX=4565 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0M3W72.7e-45100.00AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G711160 PE=4 SV... [more]
A0A5C7IL661.2e-1343.90AAI domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_004968 PE=4... [more]
A0A6I9SZ882.1e-1339.02non-specific lipid-transfer protein 2-like OS=Sesamum indicum OX=4182 GN=LOC1051... [more]
A0A5C7ILK82.7e-1342.68AAI domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_004965 PE=4... [more]
A0A6J1D4R33.5e-1342.05non-specific lipid-transfer protein 2-like OS=Momordica charantia OX=3673 GN=LOC... [more]
Match NameE-valueIdentityDescription
AT1G73780.15.0e-1234.52Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT1G66850.13.3e-1136.76Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT1G43667.12.3e-0934.29Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT5G38160.12.3e-0935.29Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
AT1G07747.14.0e-0931.08Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF14368LTP_2coord: 11..85
e-value: 2.3E-6
score: 27.7
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilyGENE3D1.10.110.10coord: 20..87
e-value: 2.1E-16
score: 61.9
IPR036312Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamilySUPERFAMILY47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 22..87
IPR033872Non-specific lipid-transfer protein type 2PANTHERPTHR33214BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEINcoord: 4..87
NoneNo IPR availablePANTHERPTHR33214:SF55NODULE CYSTEINE-RICH (NCR) SECRETED PEPTIDEcoord: 4..87

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G046630.1CsaV3_1G046630.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006869 lipid transport