CsaV3_1G046630 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAGGCATATGGCTGTTGGTGGTTGTGATCAATGAAACTCAGGTGTCCAAGGCAGTGAAATGCGACCCAGGGGAGTTGAGACCATGTCATTTGTCCTTCACAATGTCGATGGAGCCATCGTCGGCTTGTTGCAAGAAGGTGCTGCAGCATAGGACATGCTATTGTGAATATAGTAAAAATCCAAAGACTCAACCTTATTTAAAATATGATGCCACTCAAAGGATCATTTCTGATTGTGGCGTTGCAATCCCAACTTGCTAA ATGAGAGGCATATGGCTGTTGGTGGTTGTGATCAATGAAACTCAGGTGTCCAAGGCAGTGAAATGCGACCCAGGGGAGTTGAGACCATGTCATTTGTCCTTCACAATGTCGATGGAGCCATCGTCGGCTTGTTGCAAGAAGGTGCTGCAGCATAGGACATGCTATTGTGAATATAGTAAAAATCCAAAGACTCAACCTTATTTAAAATATGATGCCACTCAAAGGATCATTTCTGATTGTGGCGTTGCAATCCCAACTTGCTAA ATGAGAGGCATATGGCTGTTGGTGGTTGTGATCAATGAAACTCAGGTGTCCAAGGCAGTGAAATGCGACCCAGGGGAGTTGAGACCATGTCATTTGTCCTTCACAATGTCGATGGAGCCATCGTCGGCTTGTTGCAAGAAGGTGCTGCAGCATAGGACATGCTATTGTGAATATAGTAAAAATCCAAAGACTCAACCTTATTTAAAATATGATGCCACTCAAAGGATCATTTCTGATTGTGGCGTTGCAATCCCAACTTGCTAA MRGIWLLVVVINETQVSKAVKCDPGELRPCHLSFTMSMEPSSACCKKVLQHRTCYCEYSKNPKTQPYLKYDATQRIISDCGVAIPTC* Homology
BLAST of CsaV3_1G046630 vs. NCBI nr
Match: KGN66906.1 (hypothetical protein Csa_006987 [Cucumis sativus]) HSP 1 Score: 190.7 bits (483), Expect = 5.5e-45 Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0
BLAST of CsaV3_1G046630 vs. NCBI nr
Match: KAE8648143.1 (hypothetical protein Csa_023893, partial [Cucumis sativus]) HSP 1 Score: 98.6 bits (244), Expect = 2.9e-17 Identity = 39/82 (47.56%), Postives = 56/82 (68.29%), Query Frame = 0
BLAST of CsaV3_1G046630 vs. NCBI nr
Match: KAE8648147.1 (hypothetical protein Csa_023900, partial [Cucumis sativus]) HSP 1 Score: 92.8 bits (229), Expect = 1.6e-15 Identity = 36/73 (49.32%), Postives = 51/73 (69.86%), Query Frame = 0
BLAST of CsaV3_1G046630 vs. NCBI nr
Match: KAF7130038.1 (hypothetical protein RHSIM_Rhsim10G0071300 [Rhododendron simsii]) HSP 1 Score: 88.2 bits (217), Expect = 3.9e-14 Identity = 37/82 (45.12%), Postives = 55/82 (67.07%), Query Frame = 0
BLAST of CsaV3_1G046630 vs. NCBI nr
Match: KAG5527969.1 (hypothetical protein RHGRI_028783 [Rhododendron griersonianum]) HSP 1 Score: 87.0 bits (214), Expect = 8.6e-14 Identity = 39/82 (47.56%), Postives = 51/82 (62.20%), Query Frame = 0
BLAST of CsaV3_1G046630 vs. ExPASy Swiss-Prot
Match: A2XBN5 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=LTP-2 PE=3 SV=2) HSP 1 Score: 59.3 bits (142), Expect = 2.5e-08 Identity = 20/66 (30.30%), Postives = 39/66 (59.09%), Query Frame = 0
BLAST of CsaV3_1G046630 vs. ExPASy Swiss-Prot
Match: P82900 (Non-specific lipid-transfer protein 2G OS=Triticum aestivum OX=4565 PE=1 SV=2) HSP 1 Score: 53.9 bits (128), Expect = 1.1e-06 Identity = 21/84 (25.00%), Postives = 40/84 (47.62%), Query Frame = 0
BLAST of CsaV3_1G046630 vs. ExPASy Swiss-Prot
Match: P82901 (Non-specific lipid-transfer protein 2P OS=Triticum aestivum OX=4565 PE=1 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 4.0e-06 Identity = 18/66 (27.27%), Postives = 33/66 (50.00%), Query Frame = 0
BLAST of CsaV3_1G046630 vs. ExPASy TrEMBL
Match: A0A0A0M3W7 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G711160 PE=4 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 2.7e-45 Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0
BLAST of CsaV3_1G046630 vs. ExPASy TrEMBL
Match: A0A5C7IL66 (AAI domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_004968 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.2e-13 Identity = 36/82 (43.90%), Postives = 52/82 (63.41%), Query Frame = 0
BLAST of CsaV3_1G046630 vs. ExPASy TrEMBL
Match: A0A6I9SZ88 (non-specific lipid-transfer protein 2-like OS=Sesamum indicum OX=4182 GN=LOC105160581 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 2.1e-13 Identity = 32/82 (39.02%), Postives = 52/82 (63.41%), Query Frame = 0
BLAST of CsaV3_1G046630 vs. ExPASy TrEMBL
Match: A0A5C7ILK8 (AAI domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_004965 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 2.7e-13 Identity = 35/82 (42.68%), Postives = 52/82 (63.41%), Query Frame = 0
BLAST of CsaV3_1G046630 vs. ExPASy TrEMBL
Match: A0A6J1D4R3 (non-specific lipid-transfer protein 2-like OS=Momordica charantia OX=3673 GN=LOC111016938 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 3.5e-13 Identity = 37/88 (42.05%), Postives = 53/88 (60.23%), Query Frame = 0
BLAST of CsaV3_1G046630 vs. TAIR 10
Match: AT1G73780.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 67.8 bits (164), Expect = 5.0e-12 Identity = 29/84 (34.52%), Postives = 44/84 (52.38%), Query Frame = 0
BLAST of CsaV3_1G046630 vs. TAIR 10
Match: AT1G66850.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 65.1 bits (157), Expect = 3.3e-11 Identity = 25/68 (36.76%), Postives = 40/68 (58.82%), Query Frame = 0
BLAST of CsaV3_1G046630 vs. TAIR 10
Match: AT1G43667.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 58.9 bits (141), Expect = 2.3e-09 Identity = 24/70 (34.29%), Postives = 41/70 (58.57%), Query Frame = 0
BLAST of CsaV3_1G046630 vs. TAIR 10
Match: AT5G38160.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 58.9 bits (141), Expect = 2.3e-09 Identity = 24/68 (35.29%), Postives = 36/68 (52.94%), Query Frame = 0
BLAST of CsaV3_1G046630 vs. TAIR 10
Match: AT1G07747.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 58.2 bits (139), Expect = 4.0e-09 Identity = 23/74 (31.08%), Postives = 39/74 (52.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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