CsaV3_1G046010 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G046010
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1: 31815159 .. 31815956 (+)
RNA-Seq ExpressionCsaV3_1G046010
SyntenyCsaV3_1G046010
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAGGAGCCCCGACTGGTTACTTTTTGTAGGATCCTGCTGCCTTTTCCTTCCTCTAAGATTGTTACAATCCTCCATTTTCTCTCCTTCTCTCTTTTTCCTATCCCTTTCTCAGAAAATCATTTTTTCTTTTGTTCATTTTCTCCCCTTATAAATTCCTCTTTGATTTCTCATGTCACGAATCCATCCATTCATTCCTCTTAATTTGTCAACAAAGTGGTGGAGAAAAAGAAAAGAAATCTTCATTTTTTTCCTTTTTTGGGTCTTCTAAACTTGATTCTAGTTATAGGAAGGAAGAAATTTTATCATTATCATCATTATCATAACTGGGTTCCTAAGTTAATGTCCATACATGGGCCAAAATTTCTTTTTGGTTAAATAAATGGGCAAAAAACCCTAACTTGAGGAGATGGGAGACGACGGGCGAGTTCGATGGGCGACGATAGCCAATGACAAAGACGTTCAGAGATGGTCGGTTGCGTTTGAAGTGGTTGAGTTTGTTCGAATATTGTCGGCGGCATTCGGTGGCATTCGAAGCTGTTCGATGGTCTACGAGCGTTTTCGAAGAGGATGAGAGTGTGAGAAAGGCTTAGGGAGGTTTTGAGATTTTGTTTTTATTATTTTATTTTTATTCTATGATATCAAATAACTGTCACAATAATAGCATTTTTCCACAAAAAACGTGTTGTTTCCCTTTTGTGACAATTTTTTTTCTCCCTCCATTTTGTGATATAAATAACTGTCGTAGTAGATGATGTTTCTTGTAGTGTGATCGTAAATCTGTTGCTGCATATTTTGTC

mRNA sequence

ATGGGAGACGACGGGCGAGTTCGATGGGCGACGATAGCCAATGACAAAGACGTTCAGAGATGGTCGGTTGCGTTTGAAGTGGTTGAGTTTGTTCGAATATTGTCGGCGGCATTCGGTGGCATTCGAAGCTGTTCGATGGTCTACGAGCGTTTTCGAAGAGGATGA

Coding sequence (CDS)

ATGGGAGACGACGGGCGAGTTCGATGGGCGACGATAGCCAATGACAAAGACGTTCAGAGATGGTCGGTTGCGTTTGAAGTGGTTGAGTTTGTTCGAATATTGTCGGCGGCATTCGGTGGCATTCGAAGCTGTTCGATGGTCTACGAGCGTTTTCGAAGAGGATGA

Protein sequence

MGDDGRVRWATIANDKDVQRWSVAFEVVEFVRILSAAFGGIRSCSMVYERFRRG*
Homology
[Close]
BLAST of CsaV3_1G046010 vs. NCBI nr
Match: KGN66838.1 (hypothetical protein Csa_007543 [Cucumis sativus])

HSP 1 Score: 114.8 bits (286), Expect = 2.4e-22
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0 

Query: 1  MGDDGRVRWATIANDKDVQRWSVAFEVVEFVRILSAAFGGIRSCSMVYERFRRG 55
          MGDDGRVRWATIANDKDVQRWSVAFEVVEFVRILSAAFGGIRSCSMVYERFRRG
Sbjct: 1  MGDDGRVRWATIANDKDVQRWSVAFEVVEFVRILSAAFGGIRSCSMVYERFRRG 54

[Close]
BLAST of CsaV3_1G046010 vs. ExPASy TrEMBL
Match: A0A0A0LYH5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G700650 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.2e-22
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0 

Query: 1  MGDDGRVRWATIANDKDVQRWSVAFEVVEFVRILSAAFGGIRSCSMVYERFRRG 55
          MGDDGRVRWATIANDKDVQRWSVAFEVVEFVRILSAAFGGIRSCSMVYERFRRG
Sbjct: 1  MGDDGRVRWATIANDKDVQRWSVAFEVVEFVRILSAAFGGIRSCSMVYERFRRG 54

The following BLAST results are available for this feature:
BLAST of CsaV3_1G046010 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN66838.12.4e-22100.00hypothetical protein Csa_007543 [Cucumis sativus][more]
BLAST of CsaV3_1G046010 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G046010 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LYH51.2e-22100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G700650 PE=4 SV=1[more]
BLAST of CsaV3_1G046010 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G046010.1CsaV3_1G046010.1mRNA