CsaV3_1G045920 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G045920
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1: 31757008 .. 31758555 (+)
RNA-Seq ExpressionCsaV3_1G045920
SyntenyCsaV3_1G045920
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TGCTTGAAATAATGAAGTAACGAGAGTAAAAAACACATTGTTTCTACGATTTGAAATTTAAAAAAACATTGTTTCCAAGATTTGAAATTTGAAAACTGTTGTTGTGGGTTCTAACAGTTTTCTCAGACCATTTTTTTAAAAAAATGTTTACTTAATCTTAGTGTCCAACCACACCCTAAAAAATATTTGTGTTTTGTAATGAAGATTGTCCCCACGAGACAACGTTGAGTGACTGACATCTTCAAAATGTTTTAATTTTAAATAAATTTAAAAAAGAAGACGTTTTGAACACCTTGTTTGAAATATTAGAGTAATAAGGATAAAATAAGGTATTGTTTTTTTAAAAAAATTAAACAATATTTTCAATTCAAGATTTGAAATTTGGTAATCATTTTTTCAAAAGTTATGTAGGGTTCTAAACGTTTTTGCAAACCATTTTTTTTATCATTTTATTTAAAACTTGTTTTCTTTATTTCAATGTGTAATCAACCCTGAAAAACTGACAAACATTTTGAAGATATCGATCACTCCATAGTGTGTCGAGCACGTGATGACAATCTTCATGACAAAGCACAAATGGGTATTCTCAAGAACCCTAAAAAATTGACAAACATTTTGAAGATGTGTGTCGAGCAGTTGATGACAATCTTCATGACAAAACACAAATGGGTATTCTCAAGAACTCGAAAGAACTTACTAGAAATTATCCAAAAGCTTGTGGAAATTGGTCACCTTTGCTAAACAGCACACTAACGAGTATCCCTCGTCCAAAAGTCAAGGTCGTCACCAAAAGTTTGCCTAACAACGTCTAAATTTCATTCCTAATAGACTGGACAGCAGCTAACTCCTTCAAAATACTCAGATATATCTAACAACTAAATATGATGGTATTGACTAATTTGGGTTAAAAGCTAATAGGGGTATTTGAAAACTCCAAGAAATCCATATATAGATACTCACCAAAATTCAAAATTTACCTACAACAGTTCCAACGACGTAGATCAGGCTTCACCAGCGACTAATTTCAGCACAAGAGAGAGATCCGATGTTGGGACTCAACTAATGTGGCAACCCAAAATTTGGCGTGTTGAGCTGAGCGGTGTATAGGCGACGAGCGTCATTGGCTGGTCGACGTACGTCTGGTGATTGGTGCGATGAGAGAGTGAGAATGGAGTGTGAAGGAGAGATCAAGTATTTCAGATCTGGGGCGGGGCAGAAAAGACTTGAACGGCGAGGTGAGCTAGATGATGAGAAGGAACAAAAGCCGGCGGCAGAATACTGGTGCGTGGTTGTTCGGTGGAAAGGAAAGAATGCATCGAAAGGGGGGTCCGTCGGCGAGATACCAAGAAGATCTCTTAAATTACCTGTGTTTAAGAACATATTGCCCCTCCCACTCCCTTCATTTCTTATATCTTTTGATCCTCACCGCTTCATCTTTTCCTAACAACTCATCAACAATTTGCATTTCATAAAACTAATCCCTTATCACCTCTCTTTACCACAATTATGATAAAATTTATTAATAATATTTTACCAATAAAAATTTTT

mRNA sequence

ATGGAGTGTGAAGGAGAGATCAAGTATTTCAGATCTGGGGCGGGGCAGAAAAGACTTGAACGGCGAGGTGAGCTAGATGATGAGAAGGAACAAAAGCCGGCGGCAGAATACTGGTGCGTGGTTGTTCGGTGGAAAGGAAAGAATGCATCGAAAGGGGGGTCCGTCGGCGAGATACCAAGAAGATCTCTTAAATTACCTGTGTTTAAGAACATATTGCCCCTCCCACTCCCTTCATTTCTTATATCTTTTGATCCTCACCGCTTCATCTTTTCCTAA

Coding sequence (CDS)

ATGGAGTGTGAAGGAGAGATCAAGTATTTCAGATCTGGGGCGGGGCAGAAAAGACTTGAACGGCGAGGTGAGCTAGATGATGAGAAGGAACAAAAGCCGGCGGCAGAATACTGGTGCGTGGTTGTTCGGTGGAAAGGAAAGAATGCATCGAAAGGGGGGTCCGTCGGCGAGATACCAAGAAGATCTCTTAAATTACCTGTGTTTAAGAACATATTGCCCCTCCCACTCCCTTCATTTCTTATATCTTTTGATCCTCACCGCTTCATCTTTTCCTAA

Protein sequence

MECEGEIKYFRSGAGQKRLERRGELDDEKEQKPAAEYWCVVVRWKGKNASKGGSVGEIPRRSLKLPVFKNILPLPLPSFLISFDPHRFIFS*
Homology
[Close]
BLAST of CsaV3_1G045920 vs. NCBI nr
Match: KGN66830.1 (hypothetical protein Csa_007637 [Cucumis sativus])

HSP 1 Score: 191.8 bits (486), Expect = 2.6e-45
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0 

Query: 1  MECEGEIKYFRSGAGQKRLERRGELDDEKEQKPAAEYWCVVVRWKGKNASKGGSVGEIPR 60
          MECEGEIKYFRSGAGQKRLERRGELDDEKEQKPAAEYWCVVVRWKGKNASKGGSVGEIPR
Sbjct: 1  MECEGEIKYFRSGAGQKRLERRGELDDEKEQKPAAEYWCVVVRWKGKNASKGGSVGEIPR 60

Query: 61 RSLKLPVFKNILPLPLPSFLISFDPHRFIFS 92
          RSLKLPVFKNILPLPLPSFLISFDPHRFIFS
Sbjct: 61 RSLKLPVFKNILPLPLPSFLISFDPHRFIFS 91

[Close]
BLAST of CsaV3_1G045920 vs. ExPASy TrEMBL
Match: A0A0A0LY79 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G699590 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.3e-45
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0 

Query: 1  MECEGEIKYFRSGAGQKRLERRGELDDEKEQKPAAEYWCVVVRWKGKNASKGGSVGEIPR 60
          MECEGEIKYFRSGAGQKRLERRGELDDEKEQKPAAEYWCVVVRWKGKNASKGGSVGEIPR
Sbjct: 1  MECEGEIKYFRSGAGQKRLERRGELDDEKEQKPAAEYWCVVVRWKGKNASKGGSVGEIPR 60

Query: 61 RSLKLPVFKNILPLPLPSFLISFDPHRFIFS 92
          RSLKLPVFKNILPLPLPSFLISFDPHRFIFS
Sbjct: 61 RSLKLPVFKNILPLPLPSFLISFDPHRFIFS 91

The following BLAST results are available for this feature:
BLAST of CsaV3_1G045920 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN66830.12.6e-45100.00hypothetical protein Csa_007637 [Cucumis sativus][more]
BLAST of CsaV3_1G045920 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G045920 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LY791.3e-45100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G699590 PE=4 SV=1[more]
BLAST of CsaV3_1G045920 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G045920.1CsaV3_1G045920.1mRNA