CsaV3_1G045090 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G045090
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1: 30683187 .. 30683884 (-)
RNA-Seq ExpressionCsaV3_1G045090
SyntenyCsaV3_1G045090
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTGAACGGGCTCTAAAACAAGGCACAAACATTACATTCCTTAAAAAGGAGGATATGCGGTCTGTAACCCTTTAGTTTGGATTATAATAGTAAAGTATACTATATTTCCTTTCTCAGGGTAATAATCCTTCGTTTCTTTCATGCTTATATTTTTTTTATAGGATTTTGGCGCAATGCCATAGGCTAATAGCTCAGGACCTCTGCTTATTTGAACCTAACGTGGCACACAATGATGAATGGAACATGTAACTTTGAATCGCAGAAGGTGAGCTGGCTGGCTGAAGCTTGGACTAATCTGTACTTGTAGATAGCACAGGATTTAAACCAACTACCATTGCCATTGTCACTGTTTCCAAGAAGATTTTTGGTTGGCCTTTTTATAGAGGTGCATTTTTTCACTAAATCCATGAATTTTGTTGTTAGTGGTTTCTTTTTTCATCTATTTTTTTCTATCATGCATTCGAAGATATCTTCAAGTAATGAAAATAAAACTACTGTACGACTTATGTGCCAACTTCTCGTTATTATTATTATTATTTTAACTGATTGATGATGTGATTTTAAGATTTTAATAACATGAATTTGTGTACTCATTTTATCTAAACCTACACCTAAACCTATCTAATTTGTGTATTGATAGCAGCAGGTTGGTCAAGTTATGGAATTCAAGTTCAGCCCACATGGGTTACATTTGA

mRNA sequence

ATGCTTGAACGGGCTCTAAAACAAGGCACAAACATTACATTCCTTAAAAAGGAGGATATGCGGATTTTGGCGCAATGCCATAGGCTAATAGCTCAGGACCTCTGCTTATTTGAACCTAACGTGGCACACAATGATGAATGGAACATGTTGGTCAAGTTATGGAATTCAAGTTCAGCCCACATGGGTTACATTTGA

Coding sequence (CDS)

ATGCTTGAACGGGCTCTAAAACAAGGCACAAACATTACATTCCTTAAAAAGGAGGATATGCGGATTTTGGCGCAATGCCATAGGCTAATAGCTCAGGACCTCTGCTTATTTGAACCTAACGTGGCACACAATGATGAATGGAACATGTTGGTCAAGTTATGGAATTCAAGTTCAGCCCACATGGGTTACATTTGA

Protein sequence

MLERALKQGTNITFLKKEDMRILAQCHRLIAQDLCLFEPNVAHNDEWNMLVKLWNSSSAHMGYI*
Homology
[Close]
BLAST of CsaV3_1G045090 vs. NCBI nr
Match: KGN66734.1 (hypothetical protein Csa_007518 [Cucumis sativus])

HSP 1 Score: 138.3 bits (347), Expect = 2.4e-29
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MLERALKQGTNITFLKKEDMRILAQCHRLIAQDLCLFEPNVAHNDEWNMLVKLWNSSSAH 60
          MLERALKQGTNITFLKKEDMRILAQCHRLIAQDLCLFEPNVAHNDEWNMLVKLWNSSSAH
Sbjct: 1  MLERALKQGTNITFLKKEDMRILAQCHRLIAQDLCLFEPNVAHNDEWNMLVKLWNSSSAH 60

Query: 61 MGYI 65
          MGYI
Sbjct: 61 MGYI 64

[Close]
BLAST of CsaV3_1G045090 vs. ExPASy TrEMBL
Match: A0A0A0M0A7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G666440 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.2e-29
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MLERALKQGTNITFLKKEDMRILAQCHRLIAQDLCLFEPNVAHNDEWNMLVKLWNSSSAH 60
          MLERALKQGTNITFLKKEDMRILAQCHRLIAQDLCLFEPNVAHNDEWNMLVKLWNSSSAH
Sbjct: 1  MLERALKQGTNITFLKKEDMRILAQCHRLIAQDLCLFEPNVAHNDEWNMLVKLWNSSSAH 60

Query: 61 MGYI 65
          MGYI
Sbjct: 61 MGYI 64

The following BLAST results are available for this feature:
BLAST of CsaV3_1G045090 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN66734.12.4e-29100.00hypothetical protein Csa_007518 [Cucumis sativus][more]
BLAST of CsaV3_1G045090 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G045090 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M0A71.2e-29100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G666440 PE=4 SV=1[more]
BLAST of CsaV3_1G045090 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G045090.1CsaV3_1G045090.1mRNA