CsaV3_1G043720 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGGTTTTGGGTATGAATATTTTGGTGGATTGGAAGGAGAGTCTATTTGGGGAGAAGATGTACTCAGCTATAGGGCTCTCCTTTCTTCTAAACAAAATGAGGAAGCTTTGGTAAGTACTATATACATCTATATATTACTATTTTAGTGATAACCCATAATAATTCACTTTCATTCCACTTTTCTCTATTCTAAATATCATTTTAGGACAAAATTTAAGTTTTAATAACTAAATCTAACATTTATTAAAAATATATAATTAAATTTTTTGTTTATTTAAAGTAATTACAACTACTAAAACAATATTTTAACAATCAACACGTGTTTGGGATAAGTATTATCCATCCGTATAATAGTTAGCTCTATTTCAAAACTCTTTCATTCACAACAATATTTACTTGCTACCGTTTTTTCTATTTTATACTAATCTTTTTTCTTTATTCTTTACTGGAGTGTTTATTATTTCCTTTCCAAATTAAAATAATTTATCCCTCAAACACATATTATTATAATTCAAACTAAAATAACTTACCCTCTAGATACAAACTTCTTATCCAAACGCTCCCTATTGTATTGTAAATCTTAATGAATTGGTTTAGTAAATATAAAAATATATATTAAATTTTATAAATATAACAAAATACCAAAATGTTTACGACTCTGTAACAAAATCAAAAAATCCATGAAATCGACTAATTTTTTAAAAAATATTCTAGGTTTGTCATTCTTTTCCATCTTCTTTTTTTCTTCTTCTTCTGCAATTTTTCTTTTTTCTTCAATTGTCTTTCTTCTCTTCTTCTGCAATTTTTTTTTATAAATTATTGAAATTATAATTTTTGTTATCAATCAATCATAAATATTGTATTATTTTTTATTAATACAATATTGGTACACGGTTGGGATTATTTTTTATTAATACAATATTTATTAAGTGTTATTTAAATTCAAGATCGTGTACTAAAAATAAAATATCTTGAAAAAAAAATGTTGGGATATTGGTACACGATTTTAGATTTGGGTAGCCAAATCTAAACCACCGTGTACCAATTAAATATATTACGCACTTGAGTGGCCAATTAATTGTGTGTTGACCGTGACATTTTTGTTATTTTCTAATGTGGGTCTGTGAACTTTTTCTGTTTTCGAAATTGTTCTATACAGTATAAATATTTTGTCGATTTGTTATATTGTTTAAAATCAACAAAGAAAAATGTAATAAAGGTATATGATGAAGATGGACTTGTTGAATGTGTAATACGTGTGTTTGAGTATGAGTTAACAAGTCAACTAACTTAATTGTTCTAAAACAAGTTGACTTGAGATTAATGTTATAGGTTATGATTAGGGTAGAAAAAAAGAGAGGGATTGAGGTTAGGTTTTTGTAATAAAGAGAGTTGTAGGAAGAAAAGTCTTGAATTGTCGCACCCCTTCAACAATTATTTGTATCCAAAATTCATTTATTCTCATATCAATATATTTAATACTTAATTAATACTCATTAACACTAAATTAGTATAATTTAGTTATACTAAACATAATATTATTTTCAAAATAAGCCTAATTCAAGTAACATAATATTTGTATTATTAATTTTTATTTATTATAATATAATTATTTATATTTTATACCATTTAAATGGCTTCCCAATCATCATTTCATAATTAAAATGTTAAGAAGAATAATTTTAAAATTTATTTTAAGATTTTGGTGTGATCAATTCTCTAAATAAAATAATAATAATAATAATAATAATAAACAAATAAGTATAACCAAGGTTATGTAAATTTTAGAACAAAATGCGAAAAAATTTATAGCTCGTACAATGAAAAAAAACTCATCAACTCACCATTGTTCTTTCATAAGTTTCATATTTTTGCCTTTGTTAGTTTTGAATTTTTTAGGATGATCATTCTCGAATTCATGCACATCTTTTTCATATTCCCCTTTTTCACTATTTCTTCCTTTCTTCTTTCAGAATTTCTTTCTTCTTTGTCATCTCTCATCTTCTTTGTTTTTTTCACTACATGATCATGTATGCCAAAATATAAACGATGATCGTCTATCTCAGATAGACAGAGATAGATCACTATCACTATCTATCCCAAATAGATAAGTGATAGATTTAAACAATCGTTTACCAAGATCTAAATTATCGTTTATCAATATCTAAATAATCTTGATACAAGATCGTGTACTAAAGATAATTTAGATTTGGTACAAGATCGTTAAATTTTGTACAAGATCATGTACATAGATCGTTTAGATATTGTTACACAGTCGTCTATTCCAAATTGATAGAGATTGGTCACTATCATTGTCTATCTCATATAGATAAATAATAGATTCAAACGATCATTTACCACGATCTAAACGATCCGTGTAGCAATATCTAAATCAATCTTTTAGACTATATTATATACAATTGTTTAAATTAGAAGTTTTTTTGAACTCGTGTGTGGTCGATTAATATCAGGTATTTTTGTTATTTCACGTTGTAGGTTTATGGACTTATTCTTTTCTCAAAATTGTTTTATTCCGTGTAAATATTTTGTATTTTTTCTTTTTTGGAAAAAAAAACCTATAACCAAAGTATATATTAATGAAATAATAAATTTGATATTGGGTGGACGCTTAGAAAATAAAAAATTAAAAAAAAAAGTTAAATCTAAAATCTAACATCTTTCATCTTTTCAAGTCATAGAATAAATTTAAAAAGTTATTTTAATTAAATTAATAAATAATTATTTTTATCAATTAGCATAGGTGGGTTATTTTAAAAAAATGTTATATTTTAAAAAAAATTAGAAAAAAGGGGTGATATGGAAAGTATTTAGAAAAATACTTTTTTATATATATATATAATTTCACCCTGTTCTCTCTCTCCCCATTAATTGTGTTTTTTCTTTCTCCTTTTATATATATATATATCTTTCCATTATTACTCAATTACTTTTTTTTTCTCTTTTTTTAGTTTTCCCATTATTACTTAATTGTTATTTTTTGTTTTAAATAAATTCACATTTTCTTTTCTTTTCTTTTTTATAATTTTCTCATATTACTTAATAAATTTTTAATTGTTCTTTTTTGTATTATTTATTTTTCTTAAATTACCGTTAAATACATCCATTTAAATTTTTTTACATTGAAATCATTCTATCTTATTTTAGGTTAAAATATCATTTGGTATTTGTAATTTGATCTTTGTTCGACTTTGGTTAATGTACTTTTAATTGTTTAATTTTTCACCATTATTATTTATTACTTTATATTTTTAAATTTTTCATTTTAATATAATTTTTTAATAATTTATTATTTCACTTCCATATTTTTTGTAATCTATTTGACAATTTTTTTTAAAAAAATTTAGTAGCATGTTTTCCTTCAAAATTGATTTAACAACCATGTTCATGATAATTTGATAATTTTGTAATAATTTAGGGTTTAAGGAATGATCTTTCTAAAATTGACGTAATTAATTTTTATTTTTCTTTTTTCTTTTTTCTTTTATTATTTTGGATTAATATCATACTACTATTCTTAAATTGTTACCGTTTTAAAAAAATGATTCAAATATATAAAATTTAAATTTAATTAAAGCATTCAAAAGAACAAAAAAAATTAATAATTTATTAAGTAATAATGAAAAAAAAATAGAAAAGACAAGACTGAATTTATTTAAAGAAAATAAATAAAATAAAATAAAAGTTAGTGAGTAATAATGGAAAGATATAAAAGAAAAGAAAAAATGCAATTAATGGGGAAAGAGAACAAGGTGAAATTAAAAAAAAAAAAAATTGCTTGAAGAGATACATTAGGCCAAAATTGTCACCCCATTTCTCTAAATACTTTTCATATCACTCATTTTTCTTAATTCTTTTTAAATATATTCCTTTTTTTTCAAATAACTAATTAATTCTTTTTTAAATATATTCCTTTTTTCAAATAACTAACCATAAGGCGTTAAGATTTTTACACGATAATTGATTATGCTTTGAAACATCATATCTTACTATACATGTGAACACAAGTTCAAATCAGATTTAAATATAATTCAAATGACATGAGTCTAACAAAACGATCGTTGTTGAACAAATTAAAAATATAAATCAATTTTTTTAACTCAAATAAAATTGGTTGTAGTGTTTCCAAGCTAGATGGGAGCCTCCTCATGGAATGTTTAGAATATGGCATCCATGGAAGGAGTATAACAAGATTGGAAGCTTATCAAGGGAATGTGCCTACCGCTTTGAAATCCTCAACTCTCTCAAAGCTCATACAATCCAAGTAAGTTCGGCATTGTTTAGTAGATAGTGTGGCTTATATATACTTTTTCTTTCAGACTTACTGTGAGATCAGTAAATATGTGTTTGTTATATAATATAGCTTAACAAATTCACCTTTATTTCAACAGTCACCCTTGGAAATTCAGAGGCAATACCAAGAGCACTGCTTGCAACTATGCATTGAATCAGGAAAAGCTTTAAACTCCATAGCAATGGCAATAAGAGATATAATTCCACCTGCCATGGCCAAGTCCCACACGGAAAAAGCAAAGGAGAAGGCTGAAGCACTCATGTCTTTGCTAAAGAGTAGCCATTTTAATGGTGACATGAAGATGGTATCAACTACAACTTTGATTTATCTGCTCATTGATTGTTTATCTTGTGTCGAGAAGATTGTTGATTCTGTCCATGACTTGGTTTCGCTTGCTCGGCCTAAAACCACACATCCTCCGAAGCAGGCTGGTGTAATGTCGACAGAGCAAAAGGCTCCTCATAACATTATCATTACTCATATTCAAATTGCAGAGTAG ATGGCAGGTTTTGGGTATGAATATTTTGGTGGATTGGAAGGAGAGTCTATTTGGGGAGAAGATGTACTCAGCTATAGGGCTCTCCTTTCTTCTAAACAAAATGAGGAAGCTTTGTGTTTCCAAGCTAGATGGGAGCCTCCTCATGGAATGTTTAGAATATGGCATCCATGGAAGGAGTATAACAAGATTGGAAGCTTATCAAGGGAATGTGCCTACCGCTTTGAAATCCTCAACTCTCTCAAAGCTCATACAATCCAATCACCCTTGGAAATTCAGAGGCAATACCAAGAGCACTGCTTGCAACTATGCATTGAATCAGGAAAAGCTTTAAACTCCATAGCAATGGCAATAAGAGATATAATTCCACCTGCCATGGCCAAGTCCCACACGGAAAAAGCAAAGGAGAAGGCTGAAGCACTCATGTCTTTGCTAAAGAGTAGCCATTTTAATGGTGACATGAAGATGGTATCAACTACAACTTTGATTTATCTGCTCATTGATTGTTTATCTTGTGTCGAGAAGATTGTTGATTCTGTCCATGACTTGGTTTCGCTTGCTCGGCCTAAAACCACACATCCTCCGAAGCAGGCTGGTGTAATGTCGACAGAGCAAAAGGCTCCTCATAACATTATCATTACTCATATTCAAATTGCAGAGTAG ATGGCAGGTTTTGGGTATGAATATTTTGGTGGATTGGAAGGAGAGTCTATTTGGGGAGAAGATGTACTCAGCTATAGGGCTCTCCTTTCTTCTAAACAAAATGAGGAAGCTTTGTGTTTCCAAGCTAGATGGGAGCCTCCTCATGGAATGTTTAGAATATGGCATCCATGGAAGGAGTATAACAAGATTGGAAGCTTATCAAGGGAATGTGCCTACCGCTTTGAAATCCTCAACTCTCTCAAAGCTCATACAATCCAATCACCCTTGGAAATTCAGAGGCAATACCAAGAGCACTGCTTGCAACTATGCATTGAATCAGGAAAAGCTTTAAACTCCATAGCAATGGCAATAAGAGATATAATTCCACCTGCCATGGCCAAGTCCCACACGGAAAAAGCAAAGGAGAAGGCTGAAGCACTCATGTCTTTGCTAAAGAGTAGCCATTTTAATGGTGACATGAAGATGGTATCAACTACAACTTTGATTTATCTGCTCATTGATTGTTTATCTTGTGTCGAGAAGATTGTTGATTCTGTCCATGACTTGGTTTCGCTTGCTCGGCCTAAAACCACACATCCTCCGAAGCAGGCTGGTGTAATGTCGACAGAGCAAAAGGCTCCTCATAACATTATCATTACTCATATTCAAATTGCAGAGTAG MAGFGYEYFGGLEGESIWGEDVLSYRALLSSKQNEEALCFQARWEPPHGMFRIWHPWKEYNKIGSLSRECAYRFEILNSLKAHTIQSPLEIQRQYQEHCLQLCIESGKALNSIAMAIRDIIPPAMAKSHTEKAKEKAEALMSLLKSSHFNGDMKMVSTTTLIYLLIDCLSCVEKIVDSVHDLVSLARPKTTHPPKQAGVMSTEQKAPHNIIITHIQIAE* Homology
BLAST of CsaV3_1G043720 vs. NCBI nr
Match: KAE8653542.1 (hypothetical protein Csa_006874 [Cucumis sativus]) HSP 1 Score: 445.7 bits (1145), Expect = 2.4e-121 Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0
BLAST of CsaV3_1G043720 vs. NCBI nr
Match: XP_004139137.1 (aluminum-activated malate transporter 2 [Cucumis sativus]) HSP 1 Score: 441.8 bits (1135), Expect = 3.4e-120 Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0
BLAST of CsaV3_1G043720 vs. NCBI nr
Match: KAA0055916.1 (aluminum-activated malate transporter 2 [Cucumis melo var. makuwa] >TYK28119.1 aluminum-activated malate transporter 2 [Cucumis melo var. makuwa]) HSP 1 Score: 373.2 bits (957), Expect = 1.5e-99 Identity = 192/218 (88.07%), Postives = 198/218 (90.83%), Query Frame = 0
BLAST of CsaV3_1G043720 vs. NCBI nr
Match: XP_038880423.1 (aluminum-activated malate transporter 2-like [Benincasa hispida]) HSP 1 Score: 324.7 bits (831), Expect = 6.1e-85 Identity = 167/218 (76.61%), Postives = 178/218 (81.65%), Query Frame = 0
BLAST of CsaV3_1G043720 vs. NCBI nr
Match: XP_023003150.1 (aluminum-activated malate transporter 2-like [Cucurbita maxima]) HSP 1 Score: 263.5 bits (672), Expect = 1.7e-66 Identity = 138/227 (60.79%), Postives = 164/227 (72.25%), Query Frame = 0
BLAST of CsaV3_1G043720 vs. ExPASy Swiss-Prot
Match: Q9SJE8 (Aluminum-activated malate transporter 2 OS=Arabidopsis thaliana OX=3702 GN=ALMT2 PE=2 SV=2) HSP 1 Score: 129.4 bits (324), Expect = 4.9e-29 Identity = 73/212 (34.43%), Postives = 122/212 (57.55%), Query Frame = 0
BLAST of CsaV3_1G043720 vs. ExPASy Swiss-Prot
Match: Q9SJE9 (Aluminum-activated malate transporter 1 OS=Arabidopsis thaliana OX=3702 GN=ALMT1 PE=1 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 8.4e-29 Identity = 70/198 (35.35%), Postives = 116/198 (58.59%), Query Frame = 0
BLAST of CsaV3_1G043720 vs. ExPASy Swiss-Prot
Match: Q9XIN1 (Aluminum-activated malate transporter 7 OS=Arabidopsis thaliana OX=3702 GN=ALMT7 PE=3 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 5.5e-28 Identity = 71/202 (35.15%), Postives = 119/202 (58.91%), Query Frame = 0
BLAST of CsaV3_1G043720 vs. ExPASy Swiss-Prot
Match: Q9SRM9 (Aluminum-activated malate transporter 8 OS=Arabidopsis thaliana OX=3702 GN=ALMT8 PE=3 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 1.3e-24 Identity = 70/208 (33.65%), Postives = 112/208 (53.85%), Query Frame = 0
BLAST of CsaV3_1G043720 vs. ExPASy Swiss-Prot
Match: Q76LB1 (Aluminum-activated malate transporter 1 OS=Triticum aestivum OX=4565 GN=ALMT1 PE=1 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 2.0e-17 Identity = 56/174 (32.18%), Postives = 92/174 (52.87%), Query Frame = 0
BLAST of CsaV3_1G043720 vs. ExPASy TrEMBL
Match: A0A5D3DXG5 (Aluminum-activated malate transporter 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold289G00250 PE=3 SV=1) HSP 1 Score: 373.2 bits (957), Expect = 7.3e-100 Identity = 192/218 (88.07%), Postives = 198/218 (90.83%), Query Frame = 0
BLAST of CsaV3_1G043720 vs. ExPASy TrEMBL
Match: A0A0A0LZX9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G630340 PE=4 SV=1) HSP 1 Score: 265.0 bits (676), Expect = 2.8e-67 Identity = 141/170 (82.94%), Postives = 148/170 (87.06%), Query Frame = 0
BLAST of CsaV3_1G043720 vs. ExPASy TrEMBL
Match: A0A6J1KQZ3 (aluminum-activated malate transporter 2-like OS=Cucurbita maxima OX=3661 GN=LOC111496849 PE=3 SV=1) HSP 1 Score: 263.5 bits (672), Expect = 8.1e-67 Identity = 138/227 (60.79%), Postives = 164/227 (72.25%), Query Frame = 0
BLAST of CsaV3_1G043720 vs. ExPASy TrEMBL
Match: A0A0A0M301 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G630850 PE=3 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 1.9e-39 Identity = 97/215 (45.12%), Postives = 132/215 (61.40%), Query Frame = 0
BLAST of CsaV3_1G043720 vs. ExPASy TrEMBL
Match: A0A5A7UR04 (Aluminum-activated malate transporter 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G00250 PE=3 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 4.6e-38 Identity = 92/189 (48.68%), Postives = 123/189 (65.08%), Query Frame = 0
BLAST of CsaV3_1G043720 vs. TAIR 10
Match: AT1G08440.1 (Aluminium activated malate transporter family protein ) HSP 1 Score: 129.4 bits (324), Expect = 3.5e-30 Identity = 73/212 (34.43%), Postives = 122/212 (57.55%), Query Frame = 0
BLAST of CsaV3_1G043720 vs. TAIR 10
Match: AT1G08430.1 (aluminum-activated malate transporter 1 ) HSP 1 Score: 128.6 bits (322), Expect = 6.0e-30 Identity = 70/198 (35.35%), Postives = 116/198 (58.59%), Query Frame = 0
BLAST of CsaV3_1G043720 vs. TAIR 10
Match: AT2G27240.1 (Aluminium activated malate transporter family protein ) HSP 1 Score: 125.9 bits (315), Expect = 3.9e-29 Identity = 71/202 (35.15%), Postives = 119/202 (58.91%), Query Frame = 0
BLAST of CsaV3_1G043720 vs. TAIR 10
Match: AT3G11680.1 (Aluminium activated malate transporter family protein ) HSP 1 Score: 114.8 bits (286), Expect = 9.0e-26 Identity = 70/208 (33.65%), Postives = 112/208 (53.85%), Query Frame = 0
BLAST of CsaV3_1G043720 vs. TAIR 10
Match: AT4G00910.1 (Aluminium activated malate transporter family protein ) HSP 1 Score: 67.8 bits (164), Expect = 1.3e-11 Identity = 59/222 (26.58%), Postives = 97/222 (43.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|