CsaV3_1G043550 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G043550
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	60S ribosomal protein L10a
Location	chr1: 28547435 .. 28547752 (-)
RNA-Seq Expression	CsaV3_1G043550
Synteny	CsaV3_1G043550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACAACAAACTTCATAGTGATGCGTTGAGAGAAGCCATTTCATCTATATTTGCTGATAGCGGTGAAAAGAAGCGCAAATTCACCGAGACCATTGAACTTCATATTGGACTGAAGAACTATGATCCACAAAAGGACAAGCGTTTCAGTGGTTCAGTGAAGTTGCCGCATATCCCTCGCCCTAAGATGAAGATCTGCATTCTTGGAGATGTTTCACATGTTGAAGAGGTAACTTAATCTCCTCTTTTACATCTTCACTTAATCACTTGTTATGCTCAGTTACTGTTTTCCTTGGTTTTTTTTCCGTAGAGGAGATGA

mRNA sequence

ATGTACAACAAACTTCATAGTGATGCGTTGAGAGAAGCCATTTCATCTATATTTGCTGATAGCGGTGAAAAGAAGCGCAAATTCACCGAGACCATTGAACTTCATATTGGACTGAAGAACTATGATCCACAAAAGGACAAGCGTTTCAGTGGTTCAGTGAAGTTGCCGCATATCCCTCGCCCTAAGATGAAGATCTGCATTCTTGGAGATGTTTCACATGTTGAAGAGAGGAGATGA

Coding sequence (CDS)

ATGTACAACAAACTTCATAGTGATGCGTTGAGAGAAGCCATTTCATCTATATTTGCTGATAGCGGTGAAAAGAAGCGCAAATTCACCGAGACCATTGAACTTCATATTGGACTGAAGAACTATGATCCACAAAAGGACAAGCGTTTCAGTGGTTCAGTGAAGTTGCCGCATATCCCTCGCCCTAAGATGAAGATCTGCATTCTTGGAGATGTTTCACATGTTGAAGAGAGGAGATGA

Protein sequence

MYNKLHSDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICILGDVSHVEERR*

Homology

[Close]

BLAST of CsaV3_1G043550 vs. NCBI nr
Match: KAE8653536.1 (hypothetical protein Csa_007457 [Cucumis sativus])

HSP 1 Score: 162.9 bits (411), Expect = 1.1e-36
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 1  MYNKLHSDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPR 60
          MYNKLHSDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPR
Sbjct: 1  MYNKLHSDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPR 60

Query: 61 PKMKICILGDVSHVEERR 79
          PKMKICILGDVSHVEERR
Sbjct: 61 PKMKICILGDVSHVEERR 78

[Close]

BLAST of CsaV3_1G043550 vs. NCBI nr
Match: XP_031736021.1 (60S ribosomal protein L10a-like [Cucumis sativus])

HSP 1 Score: 159.1 bits (401), Expect = 1.6e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1  MYNKLHSDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPR 60
          MYNKLHSDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPR
Sbjct: 1  MYNKLHSDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPR 60

Query: 61 PKMKICILGDVSHVEE 77
          PKMKICILGDVSHVEE
Sbjct: 61 PKMKICILGDVSHVEE 76

[Close]

BLAST of CsaV3_1G043550 vs. NCBI nr
Match: KAA0033405.1 (60S ribosomal protein L10a [Cucumis melo var. makuwa])

HSP 1 Score: 143.7 bits (361), Expect = 6.9e-31
Identity = 69/74 (93.24%), Postives = 71/74 (95.95%), Query Frame = 0


Query: 3  NKLHSDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPK 62
          +KL SDALREAISSIFADSGEKKRKFTETIEL IGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2  SKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 63 MKICILGDVSHVEE 77
          MKIC+LGD SHVEE
Sbjct: 62 MKICMLGDASHVEE 75

[Close]

BLAST of CsaV3_1G043550 vs. NCBI nr
Match: XP_008458587.1 (PREDICTED: 60S ribosomal protein L10a [Cucumis melo] >XP_011657068.1 60S ribosomal protein L10a [Cucumis sativus] >KGN46947.1 hypothetical protein Csa_021060 [Cucumis sativus])

HSP 1 Score: 143.7 bits (361), Expect = 6.9e-31
Identity = 69/74 (93.24%), Postives = 71/74 (95.95%), Query Frame = 0


Query: 3  NKLHSDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPK 62
          +KL SDALREAISSIFADSGEKKRKFTETIEL IGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2  SKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 63 MKICILGDVSHVEE 77
          MKIC+LGD SHVEE
Sbjct: 62 MKICMLGDASHVEE 75

[Close]

BLAST of CsaV3_1G043550 vs. NCBI nr
Match: XP_038893874.1 (60S ribosomal protein L10a [Benincasa hispida] >XP_038893875.1 60S ribosomal protein L10a [Benincasa hispida])

HSP 1 Score: 139.8 bits (351), Expect = 1.0e-29
Identity = 67/74 (90.54%), Postives = 69/74 (93.24%), Query Frame = 0


Query: 3  NKLHSDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPK 62
          +KL SDALREAISSIF DS EKKRKFTETIEL IGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2  SKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 63 MKICILGDVSHVEE 77
          MKIC+LGD SHVEE
Sbjct: 62 MKICMLGDASHVEE 75

[Close]

BLAST of CsaV3_1G043550 vs. ExPASy Swiss-Prot
Match: B8B9K6 (60S ribosomal protein L10a OS=Oryza sativa subsp. indica OX=39946 GN=RPL10A PE=3 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 9.8e-28
Identity = 56/74 (75.68%), Postives = 64/74 (86.49%), Query Frame = 0


Query: 3  NKLHSDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPK 62
          +KL S+ L+EAIS +  +S EK RKFTET+EL IGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2  SKLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 63 MKICILGDVSHVEE 77
          MK+C+LGD  HVEE
Sbjct: 62 MKVCMLGDAQHVEE 75

[Close]

BLAST of CsaV3_1G043550 vs. ExPASy Swiss-Prot
Match: B7F845 (60S ribosomal protein L10a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL10A PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 9.8e-28
Identity = 56/74 (75.68%), Postives = 64/74 (86.49%), Query Frame = 0


Query: 3  NKLHSDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPK 62
          +KL S+ L+EAIS +  +S EK RKFTET+EL IGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2  SKLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 63 MKICILGDVSHVEE 77
          MK+C+LGD  HVEE
Sbjct: 62 MKVCMLGDAQHVEE 75

[Close]

BLAST of CsaV3_1G043550 vs. ExPASy Swiss-Prot
Match: P59230 (60S ribosomal protein L10a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10AB PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 2.8e-27
Identity = 57/74 (77.03%), Postives = 64/74 (86.49%), Query Frame = 0


Query: 3  NKLHSDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPK 62
          +KL S+A+REAI++I   S EKKR F ET+EL IGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2  SKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 63 MKICILGDVSHVEE 77
          MKIC+LGD  HVEE
Sbjct: 62 MKICMLGDAQHVEE 75

[Close]

BLAST of CsaV3_1G043550 vs. ExPASy Swiss-Prot
Match: Q8VZB9 (60S ribosomal protein L10a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10AA PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 8.3e-27
Identity = 57/74 (77.03%), Postives = 63/74 (85.14%), Query Frame = 0


Query: 3  NKLHSDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPK 62
          +KL S+A+REAI++I   S  KKR F ETIEL IGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2  SKLQSEAVREAITTITGKSEAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 63 MKICILGDVSHVEE 77
          MKIC+LGD  HVEE
Sbjct: 62 MKICMLGDAQHVEE 75

[Close]

BLAST of CsaV3_1G043550 vs. ExPASy Swiss-Prot
Match: P59231 (60S ribosomal protein L10a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL10AC PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 3.1e-26
Identity = 58/75 (77.33%), Postives = 63/75 (84.00%), Query Frame = 0


Query: 3  NKLHSDALREAISSIFADSGE-KKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRP 62
          +KL S+A+REAISSI     E K R FTETIEL IGLKNYDPQKDKRFSGSVKLPH+PRP
Sbjct: 2  SKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPRP 61

Query: 63 KMKICILGDVSHVEE 77
          KMKIC+LGD  HVEE
Sbjct: 62 KMKICMLGDAQHVEE 76

[Close]

BLAST of CsaV3_1G043550 vs. ExPASy TrEMBL
Match: A0A0A0M0B3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G629190 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 7.7e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1  MYNKLHSDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPR 60
          MYNKLHSDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPR
Sbjct: 1  MYNKLHSDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPR 60

Query: 61 PKMKICILGDVSHVEE 77
          PKMKICILGDVSHVEE
Sbjct: 61 PKMKICILGDVSHVEE 76

[Close]

BLAST of CsaV3_1G043550 vs. ExPASy TrEMBL
Match: A0A5A7SW61 (60S ribosomal protein L10a OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G00570 PE=3 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 3.4e-31
Identity = 69/74 (93.24%), Postives = 71/74 (95.95%), Query Frame = 0


Query: 3  NKLHSDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPK 62
          +KL SDALREAISSIFADSGEKKRKFTETIEL IGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2  SKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 63 MKICILGDVSHVEE 77
          MKIC+LGD SHVEE
Sbjct: 62 MKICMLGDASHVEE 75

[Close]

BLAST of CsaV3_1G043550 vs. ExPASy TrEMBL
Match: A0A0A0KEW8 (Ribosomal protein OS=Cucumis sativus OX=3659 GN=Csa_6G152330 PE=3 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 3.4e-31
Identity = 69/74 (93.24%), Postives = 71/74 (95.95%), Query Frame = 0


Query: 3  NKLHSDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPK 62
          +KL SDALREAISSIFADSGEKKRKFTETIEL IGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2  SKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 63 MKICILGDVSHVEE 77
          MKIC+LGD SHVEE
Sbjct: 62 MKICMLGDASHVEE 75

[Close]

BLAST of CsaV3_1G043550 vs. ExPASy TrEMBL
Match: A0A1S3C7Q8 (Ribosomal protein OS=Cucumis melo OX=3656 GN=LOC103497946 PE=3 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 3.4e-31
Identity = 69/74 (93.24%), Postives = 71/74 (95.95%), Query Frame = 0


Query: 3  NKLHSDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPK 62
          +KL SDALREAISSIFADSGEKKRKFTETIEL IGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2  SKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 63 MKICILGDVSHVEE 77
          MKIC+LGD SHVEE
Sbjct: 62 MKICMLGDASHVEE 75

[Close]

BLAST of CsaV3_1G043550 vs. ExPASy TrEMBL
Match: A0A5A7T1H8 (Ribosomal protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G003490 PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 6.3e-30
Identity = 66/74 (89.19%), Postives = 69/74 (93.24%), Query Frame = 0


Query: 3  NKLHSDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPK 62
          +KL SDALREAISSIF DS EKKRKFTETIEL IGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2  SKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 63 MKICILGDVSHVEE 77
          MKIC+LGD SH+EE
Sbjct: 62 MKICMLGDASHIEE 75

[Close]

BLAST of CsaV3_1G043550 vs. TAIR 10
Match: AT2G27530.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 122.1 bits (305), Expect = 2.0e-28
Identity = 57/74 (77.03%), Postives = 64/74 (86.49%), Query Frame = 0


Query: 3  NKLHSDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPK 62
          +KL S+A+REAI++I   S EKKR F ET+EL IGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2  SKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 63 MKICILGDVSHVEE 77
          MKIC+LGD  HVEE
Sbjct: 62 MKICMLGDAQHVEE 75

[Close]

BLAST of CsaV3_1G043550 vs. TAIR 10
Match: AT2G27530.2 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 122.1 bits (305), Expect = 2.0e-28
Identity = 57/74 (77.03%), Postives = 64/74 (86.49%), Query Frame = 0


Query: 3  NKLHSDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPK 62
          +KL S+A+REAI++I   S EKKR F ET+EL IGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2  SKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 63 MKICILGDVSHVEE 77
          MKIC+LGD  HVEE
Sbjct: 62 MKICMLGDAQHVEE 75

[Close]

BLAST of CsaV3_1G043550 vs. TAIR 10
Match: AT1G08360.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 120.6 bits (301), Expect = 5.9e-28
Identity = 57/74 (77.03%), Postives = 63/74 (85.14%), Query Frame = 0


Query: 3  NKLHSDALREAISSIFADSGEKKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRPK 62
          +KL S+A+REAI++I   S  KKR F ETIEL IGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2  SKLQSEAVREAITTITGKSEAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 63 MKICILGDVSHVEE 77
          MKIC+LGD  HVEE
Sbjct: 62 MKICMLGDAQHVEE 75

[Close]

BLAST of CsaV3_1G043550 vs. TAIR 10
Match: AT5G22440.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 118.6 bits (296), Expect = 2.2e-27
Identity = 58/75 (77.33%), Postives = 63/75 (84.00%), Query Frame = 0


Query: 3  NKLHSDALREAISSIFADSGE-KKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRP 62
          +KL S+A+REAISSI     E K R FTETIEL IGLKNYDPQKDKRFSGSVKLPH+PRP
Sbjct: 2  SKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPRP 61

Query: 63 KMKICILGDVSHVEE 77
          KMKIC+LGD  HVEE
Sbjct: 62 KMKICMLGDAQHVEE 76

[Close]

BLAST of CsaV3_1G043550 vs. TAIR 10
Match: AT5G22440.2 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 118.6 bits (296), Expect = 2.2e-27
Identity = 58/75 (77.33%), Postives = 63/75 (84.00%), Query Frame = 0


Query: 3  NKLHSDALREAISSIFADSGE-KKRKFTETIELHIGLKNYDPQKDKRFSGSVKLPHIPRP 62
          +KL S+A+REAISSI     E K R FTETIEL IGLKNYDPQKDKRFSGSVKLPH+PRP
Sbjct: 2  SKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPRP 61

Query: 63 KMKICILGDVSHVEE 77
          KMKIC+LGD  HVEE
Sbjct: 62 KMKICMLGDAQHVEE 76

The following BLAST results are available for this feature:

BLAST of CsaV3_1G043550 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8653536.1	1.1e-36	100.00	hypothetical protein Csa_007457 [Cucumis sativus]	[more]
XP_031736021.1	1.6e-35	100.00	60S ribosomal protein L10a-like [Cucumis sativus]	[more]
KAA0033405.1	6.9e-31	93.24	60S ribosomal protein L10a [Cucumis melo var. makuwa]	[more]
XP_008458587.1	6.9e-31	93.24	PREDICTED: 60S ribosomal protein L10a [Cucumis melo] >XP_011657068.1 60S ribosom...	[more]
XP_038893874.1	1.0e-29	90.54	60S ribosomal protein L10a [Benincasa hispida] >XP_038893875.1 60S ribosomal pro...	[more]

BLAST of CsaV3_1G043550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B8B9K6	9.8e-28	75.68	60S ribosomal protein L10a OS=Oryza sativa subsp. indica OX=39946 GN=RPL10A PE=3...	[more]
B7F845	9.8e-28	75.68	60S ribosomal protein L10a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL10A PE...	[more]
P59230	2.8e-27	77.03	60S ribosomal protein L10a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10AB PE=1 SV=...	[more]
Q8VZB9	8.3e-27	77.03	60S ribosomal protein L10a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10AA PE=1 SV=...	[more]
P59231	3.1e-26	77.33	60S ribosomal protein L10a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL10AC PE=1 SV=...	[more]

BLAST of CsaV3_1G043550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M0B3	7.7e-36	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G629190 PE=4 SV=1	[more]
A0A5A7SW61	3.4e-31	93.24	60S ribosomal protein L10a OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A0A0KEW8	3.4e-31	93.24	Ribosomal protein OS=Cucumis sativus OX=3659 GN=Csa_6G152330 PE=3 SV=1	[more]
A0A1S3C7Q8	3.4e-31	93.24	Ribosomal protein OS=Cucumis melo OX=3656 GN=LOC103497946 PE=3 SV=1	[more]
A0A5A7T1H8	6.3e-30	89.19	Ribosomal protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00...	[more]

BLAST of CsaV3_1G043550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27530.1	2.0e-28	77.03	Ribosomal protein L1p/L10e family	[more]
AT2G27530.2	2.0e-28	77.03	Ribosomal protein L1p/L10e family	[more]
AT1G08360.1	5.9e-28	77.03	Ribosomal protein L1p/L10e family	[more]
AT5G22440.1	2.2e-27	77.33	Ribosomal protein L1p/L10e family	[more]
AT5G22440.2	2.2e-27	77.33	Ribosomal protein L1p/L10e family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.190.20		coord: 2..78 e-value: 1.5E-29 score: 104.5
None	No IPR available	PANTHER	PTHR23105	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	coord: 3..76
None	No IPR available	PANTHER	PTHR23105:SF164	60S RIBOSOMAL PROTEIN L10A-3	coord: 3..76
IPR023674	Ribosomal protein L1-like	SUPERFAMILY	56808	Ribosomal protein L1	coord: 2..76

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G043550.1	CsaV3_1G043550.1	mRNA