CsaV3_1G043290 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G043290
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1: 28242804 .. 28243228 (-)
RNA-Seq ExpressionCsaV3_1G043290
SyntenyCsaV3_1G043290
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGTTAATCGTCTACTTGGTGTCTCAATTTTGATTGGCGTCGATGCTATGTTTGTCAAAGTGAGCATATGCGTGGTAGGGTACTCCATATGTTTCGTTTTTTCTTGGGTCTTTGTTATCCCCGCTTGAGGTGTCCTGGTTGGGTTGGGCCTTCTCTTTTCTTTCTTTTTTTTCTTCTCGGACTAATTTCTTATTTTCAATTCTTTTGGCCTTATTCATTGTGCGGACAAAGTCATGAACTCCCAACATTCAAGCTCAATTTTAATGATCAAATCCAGGCTTATGATGAAGGTTTCCAGCATCACTTCATTTGTAAGATGGGAGACAGATGTCATCAACTTCTCAAATCGTCCATCATACTCCTTCATCATCAACGCTTACCGAATTTGAAGAAATCATCCTACCAACGTTTCTTCTCGTGA

mRNA sequence

ATGTTTGTTAATCGTCTACTTGGTGTCTCAATTTTGATTGGCGTCGATGCTATGTTTGTCAAAGTGAGCATATGCGTGGCTTATGATGAAGGTTTCCAGCATCACTTCATTTGTAAGATGGGAGACAGATGTCATCAACTTCTCAAATCGTCCATCATACTCCTTCATCATCAACGCTTACCGAATTTGAAGAAATCATCCTACCAACGTTTCTTCTCGTGA

Coding sequence (CDS)

ATGTTTGTTAATCGTCTACTTGGTGTCTCAATTTTGATTGGCGTCGATGCTATGTTTGTCAAAGTGAGCATATGCGTGGCTTATGATGAAGGTTTCCAGCATCACTTCATTTGTAAGATGGGAGACAGATGTCATCAACTTCTCAAATCGTCCATCATACTCCTTCATCATCAACGCTTACCGAATTTGAAGAAATCATCCTACCAACGTTTCTTCTCGTGA

Protein sequence

MFVNRLLGVSILIGVDAMFVKVSICVAYDEGFQHHFICKMGDRCHQLLKSSIILLHHQRLPNLKKSSYQRFFS*
Homology
[Close]
BLAST of CsaV3_1G043290 vs. NCBI nr
Match: KAE8653526.1 (hypothetical protein Csa_006976 [Cucumis sativus])

HSP 1 Score: 150.6 bits (379), Expect = 5.3e-33
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MFVNRLLGVSILIGVDAMFVKVSICVAYDEGFQHHFICKMGDRCHQLLKSSIILLHHQRL 60
          MFVNRLLGVSILIGVDAMFVKVSICVAYDEGFQHHFICKMGDRCHQLLKSSIILLHHQRL
Sbjct: 1  MFVNRLLGVSILIGVDAMFVKVSICVAYDEGFQHHFICKMGDRCHQLLKSSIILLHHQRL 60

Query: 61 PNLKKSSYQRFFS 74
          PNLKKSSYQRFFS
Sbjct: 61 PNLKKSSYQRFFS 73

The following BLAST results are available for this feature:
BLAST of CsaV3_1G043290 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8653526.15.3e-33100.00hypothetical protein Csa_006976 [Cucumis sativus][more]
BLAST of CsaV3_1G043290 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G043290 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G043290 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G043290.1CsaV3_1G043290.1mRNA