CsaV3_1G042810 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G042810
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	cyclin-dependent protein kinase inhibitor SMR9-like
Location	chr1: 27708894 .. 27710226 (-)
RNA-Seq Expression	CsaV3_1G042810
Synteny	CsaV3_1G042810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTAAGCTAAGATATATTCTTACCCTAAAAGCCAATTTTTACCCACAATATGGTTTTCTATGGAGAGAGAGAGAAAAAAAAGAAAGAGCATTAGTATCCTCTAATTGAAAAAGGAGAATTCAAAAACAATGATAACACATTTCAAAATATGACATAAAGCAAACATGTGCCTTTGTTTTCCCTCCCTTTCACTATATAACAAAACCCTCTTACATATTAACCCCTCTCTTCTTCTTCTTCTAAAAAAACTCTCAAATGGGTTACTCTATTTCCTTCCAATACTAACAAAATCTCACAAAAAAGAAACCATTTTTCAAAGAAATTCAAAGCCTTCCACATTTGAGTTCCATGGCTTCCAAAAGAGGAGAAGCAAGAAGAAGAGCAAGAAAAACAACAACGACCCAGTTGAAGAACAAGAAGATCAAGAAGAACATCAAGAACAACAACATCAAGCTAGAAGAAGAAGAAATTGAAAAAGGTACAAGTTCTTCAACAACCATTAATTTTGAAGAAAAATCAGTTTCAAGAAGAAGCTGTGATTTTGAAGAAGAAGAAGAAGAAGAAGAGTGTTGTAGTACTCCAAAAGCAGAGAGATTCAAAATCCCAGAAATCAAAATATGTCCACCCGCTCCTAAAAAGCGAAGGCTTTTTTCAAATTCAAATTCAAATTGTTCTTTACAAAGACCTTCTCCTATTGCTTTCTTTGCTTCACCAGATATAGAGCTTTTCTTCTTCTTCTCTTCACAATGACATTTTATATTTACCAATAGCTAATTTCTTTTTCCTTTTCTTTTTTTTAGTACTCAAATTAGCTTCTGGGTTTCATTTCTCTCAAAAAATGAGAGAAAATGTTGTTGATAAGAGAGTATAAGAGTTTAGAAACAGAGGAGGAGTTTGAGTTTTTTTTTATTTTATATTAATGACCAGAAAAATTCAGCTTTTAGTTTTACCAAAGGGCTGGTTTTGTATATGTAATTTGTATAGCTATGGCTATGGGGAATGGCTATGGCTAATTAATTAGCTATGAAGGTTTTTAATTAGTGTTTTCTTTTTTATTTTGATGATTTAATGTAATATTTCTGACTTTTATTAATGAGTGTGGCAATGTATAAGTGTGTGTGGTTTTGGGTTTGTGCTGTTTTGTGATATCAGCTTTTGAATAATTAGTCAAGATGAGAAAAGTTAAGGGCCCAAGACAAGGCTTTTTAACAATATTTTGTGTAAAAATCTCTCTCACACATTCTCTTTTCAACCTTCTAATTACCTATTCAATGTTCTTGTATTTCACTCATCATTATTATTGTATGTCACTTTGTTTCGATTGTATGTCTA

mRNA sequence

ATGGCTTCCAAAAGAGGAGAAGCAAGAAGAAGAGCAAGAAAAACAACAACGACCCAGTTGAAGAACAAGAAGATCAAGAAGAACATCAAGAACAACAACATCAAGCTAGAAGAAGAAGAAATTGAAAAAGGTACAAGTTCTTCAACAACCATTAATTTTGAAGAAAAATCAGTTTCAAGAAGAAGCTGTGATTTTGAAGAAGAAGAAGAAGAAGAAGAGTGTTGTAGTACTCCAAAAGCAGAGAGATTCAAAATCCCAGAAATCAAAATATGTCCACCCGCTCCTAAAAAGCGAAGGCTTTTTTCAAATTCAAATTCAAATTGTTCTTTACAAAGACCTTCTCCTATTGCTTTCTTTGCTTCACCAGATATAGAGCTTTTCTTCTTCTTCTCTTCACAATGA

Coding sequence (CDS)

ATGGCTTCCAAAAGAGGAGAAGCAAGAAGAAGAGCAAGAAAAACAACAACGACCCAGTTGAAGAACAAGAAGATCAAGAAGAACATCAAGAACAACAACATCAAGCTAGAAGAAGAAGAAATTGAAAAAGGTACAAGTTCTTCAACAACCATTAATTTTGAAGAAAAATCAGTTTCAAGAAGAAGCTGTGATTTTGAAGAAGAAGAAGAAGAAGAAGAGTGTTGTAGTACTCCAAAAGCAGAGAGATTCAAAATCCCAGAAATCAAAATATGTCCACCCGCTCCTAAAAAGCGAAGGCTTTTTTCAAATTCAAATTCAAATTGTTCTTTACAAAGACCTTCTCCTATTGCTTTCTTTGCTTCACCAGATATAGAGCTTTTCTTCTTCTTCTCTTCACAATGA

Protein sequence

MASKRGEARRRARKTTTTQLKNKKIKKNIKNNNIKLEEEEIEKGTSSSTTINFEEKSVSRRSCDFEEEEEEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPIAFFASPDIELFFFFSSQ*

Homology

[Close]

BLAST of CsaV3_1G042810 vs. NCBI nr
Match: KGN66487.1 (hypothetical protein Csa_006949 [Cucumis sativus])

HSP 1 Score: 248.4 bits (633), Expect = 3.4e-62
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MASKRGEARRRARKTTTTQLKNKKIKKNIKNNNIKLEEEEIEKGTSSSTTINFEEKSVSR 60
           MASKRGEARRRARKTTTTQLKNKKIKKNIKNNNIKLEEEEIEKGTSSSTTINFEEKSVSR
Sbjct: 1   MASKRGEARRRARKTTTTQLKNKKIKKNIKNNNIKLEEEEIEKGTSSSTTINFEEKSVSR 60

Query: 61  RSCDFEEEEEEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPIAFFA 120
           RSCDFEEEEEEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPIAFFA
Sbjct: 61  RSCDFEEEEEEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPIAFFA 120

Query: 121 SPDIELFFFFSSQ 134
           SPDIELFFFFSSQ
Sbjct: 121 SPDIELFFFFSSQ 133

[Close]

BLAST of CsaV3_1G042810 vs. NCBI nr
Match: KAG6590203.1 (Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023854.1 Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 107.8 bits (268), Expect = 7.2e-20
Identity = 74/138 (53.62%), Postives = 92/138 (66.67%), Query Frame = 0


Query: 1   MASKRGEARRRARKTTTTQL-KNKKIKKNIKNNNIKL----EEEEIEKGTSSSTTINFEE 60
           MASK G  R + +KT  TQL KN+KIKK +K+ + ++      EEIE  +S +       
Sbjct: 1   MASKGGGRRNKGKKTAKTQLKKNQKIKK-MKDQSKRIVSTKRTEEIEVSSSIAMAAMAAM 60

Query: 61  KSVSRRSCDFEEEEEEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSP 120
           +  +  S DFEE       CSTPKAERF+IPEIKICPPAPKK+R+     SNCS Q+PSP
Sbjct: 61  EESASSSSDFEE-------CSTPKAERFRIPEIKICPPAPKKQRI----TSNCSSQKPSP 120

Query: 121 IAFFASPDIELFFFFSSQ 134
           I+FFASPDIE+FFF SSQ
Sbjct: 121 ISFFASPDIEMFFFLSSQ 126

[Close]

BLAST of CsaV3_1G042810 vs. NCBI nr
Match: KAG7022087.1 (Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 95.9 bits (237), Expect = 2.8e-16
Identity = 70/141 (49.65%), Postives = 83/141 (58.87%), Query Frame = 0


Query: 1   MASKRGEARRRARKTTTTQLKNKKIKKNIKNN----------NIKLEEEEIEKGTSSSTT 60
           MASK G  RR    T   +   KK+K +  N           + K+ EE  E   SSS+ 
Sbjct: 1   MASKGGRTRRGTNPTPPLKKTKKKLKNSTNNGGRRRRRRIIMSSKIREEIEEAAASSSSA 60

Query: 61  INFEEKSVSRRSCDFEEEEEEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSL 120
           +   ++  S  S DFE        CSTPKA+RFKIPEI+ICPPAPKK+R      SNCSL
Sbjct: 61  MAAIDEQAS--SSDFEH-------CSTPKADRFKIPEIQICPPAPKKQRPI----SNCSL 120

Query: 121 QRPSPIAFFASPDIELFFFFS 132
           Q+ SPIAFFASPDIELFFFFS
Sbjct: 121 QKHSPIAFFASPDIELFFFFS 128

[Close]

BLAST of CsaV3_1G042810 vs. NCBI nr
Match: XP_023530358.1 (cyclin-dependent protein kinase inhibitor SMR9-like [Cucurbita pepo subsp. pepo] >KAG6588189.1 Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 95.5 bits (236), Expect = 3.7e-16
Identity = 70/142 (49.30%), Postives = 83/142 (58.45%), Query Frame = 0


Query: 1   MASKRGEARRRARKTTTTQLKNKKIKKNIKNN-----------NIKLEEEEIEKGTSSST 60
           MASK G  RR    T   +   KK+K +  N            + K+ EE  E   SSS+
Sbjct: 1   MASKGGRTRRGTNPTPPLKKTKKKLKNSTNNGGRRRRRRRIIMSSKIREEIEEAAASSSS 60

Query: 61  TINFEEKSVSRRSCDFEEEEEEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCS 120
            +   ++  S  S DFE        CSTPKA+RFKIPEI+ICPPAPKK+R      SNCS
Sbjct: 61  AMAAIDEQAS--SSDFEH-------CSTPKADRFKIPEIQICPPAPKKQRPI----SNCS 120

Query: 121 LQRPSPIAFFASPDIELFFFFS 132
           LQ+ SPIAFFASPDIELFFFFS
Sbjct: 121 LQKHSPIAFFASPDIELFFFFS 129

[Close]

BLAST of CsaV3_1G042810 vs. NCBI nr
Match: XP_022154348.1 (cyclin-dependent protein kinase inhibitor SMR9-like [Momordica charantia])

HSP 1 Score: 91.3 bits (225), Expect = 6.9e-15
Identity = 65/132 (49.24%), Postives = 83/132 (62.88%), Query Frame = 0


Query: 1   MASKRGEARRRARKTTTTQLKNKKIKKNIKNNNIKLEEEEIEKGTSSSTTINFEEKSVSR 60
           MASK G AR + +   + ++K K  ++  K N          + T + T +     S + 
Sbjct: 1   MASKGGIARTKMK--MSKKIKKKSPQRMKKRNPPPPSPPPKNQETETETAVELASSSAAM 60

Query: 61  RSCDFEEEEEEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPIAFFA 120
              +     + EECC TPKAERF+IPEIKICPPAPKK+R+FSN +   +LQRPSPIAFFA
Sbjct: 61  AENE-SMSSDLEECC-TPKAERFRIPEIKICPPAPKKQRIFSNCS---NLQRPSPIAFFA 120

Query: 121 SPDIELFFFFSS 133
           SPDIELFFFFSS
Sbjct: 121 SPDIELFFFFSS 125

[Close]

BLAST of CsaV3_1G042810 vs. ExPASy Swiss-Prot
Match: F4IWB3 (Cyclin-dependent protein kinase inhibitor SMR13 OS=Arabidopsis thaliana OX=3702 GN=SMR13 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 6.5e-08
Identity = 30/54 (55.56%), Postives = 39/54 (72.22%), Query Frame = 0


Query: 75  CSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPIAFFASPDIELFF 129
           C TPKA++ +IPE+  CPPAPKK+R+    + NC L+R   I FFA P+IELFF
Sbjct: 54  CCTPKAKKSRIPEMLTCPPAPKKQRV----SKNCVLRR-RQIVFFAPPEIELFF 102

[Close]

BLAST of CsaV3_1G042810 vs. ExPASy Swiss-Prot
Match: Q3ECS5 (Cyclin-dependent protein kinase inhibitor SMR9 OS=Arabidopsis thaliana OX=3702 GN=SMR9 PE=3 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 4.4e-04
Identity = 49/131 (37.40%), Postives = 67/131 (51.15%), Query Frame = 0


Query: 1   MASKRGEARRRARKTTTTQLKNKKIKKNIKNNNIKLEEEEIEKGTSSSTTINFEEKSVSR 60
           MASK    ++  R+TTT + K    K      +I  +       TS+S+T      S S 
Sbjct: 1   MASK---GKKPLRRTTTRRRKRSHFKNPSPPCSINSDV------TSTSST------STSP 60

Query: 61  RSCDFEEEEEEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPIAFFA 120
            S         E  C TP  E+ +IPE+  CPPAPKK+++      NC+L+R   IAFFA
Sbjct: 61  TSTATPSPVSAESGCCTP--EKSRIPEMLTCPPAPKKQKV----AQNCALRR-RQIAFFA 109

Query: 121 SPDIELFFFFS 132
            PD+ELFF F+
Sbjct: 121 PPDVELFFVFA 109

[Close]

BLAST of CsaV3_1G042810 vs. ExPASy Swiss-Prot
Match: Q29Q81 (Cyclin-dependent protein kinase inhibitor SMR6 OS=Arabidopsis thaliana OX=3702 GN=SMR6 PE=1 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 5.7e-04
Identity = 28/60 (46.67%), Postives = 34/60 (56.67%), Query Frame = 0


Query: 70  EEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPIAFFASP-DIELFF 129
           EEEEC +TP A+  KIPE+  CPPAP+KRR      SN   +      FF  P D+E  F
Sbjct: 55  EEEECSTTPTAKETKIPELLECPPAPRKRRPALKCRSNVVRE------FFTPPSDLETVF 108

[Close]

BLAST of CsaV3_1G042810 vs. ExPASy TrEMBL
Match: A0A0A0M041 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G613590 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.6e-62
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MASKRGEARRRARKTTTTQLKNKKIKKNIKNNNIKLEEEEIEKGTSSSTTINFEEKSVSR 60
           MASKRGEARRRARKTTTTQLKNKKIKKNIKNNNIKLEEEEIEKGTSSSTTINFEEKSVSR
Sbjct: 1   MASKRGEARRRARKTTTTQLKNKKIKKNIKNNNIKLEEEEIEKGTSSSTTINFEEKSVSR 60

Query: 61  RSCDFEEEEEEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPIAFFA 120
           RSCDFEEEEEEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPIAFFA
Sbjct: 61  RSCDFEEEEEEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPIAFFA 120

Query: 121 SPDIELFFFFSSQ 134
           SPDIELFFFFSSQ
Sbjct: 121 SPDIELFFFFSSQ 133

[Close]

BLAST of CsaV3_1G042810 vs. ExPASy TrEMBL
Match: A0A6J1DK32 (cyclin-dependent protein kinase inhibitor SMR9-like OS=Momordica charantia OX=3673 GN=LOC111021634 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 3.4e-15
Identity = 65/132 (49.24%), Postives = 83/132 (62.88%), Query Frame = 0


Query: 1   MASKRGEARRRARKTTTTQLKNKKIKKNIKNNNIKLEEEEIEKGTSSSTTINFEEKSVSR 60
           MASK G AR + +   + ++K K  ++  K N          + T + T +     S + 
Sbjct: 1   MASKGGIARTKMK--MSKKIKKKSPQRMKKRNPPPPSPPPKNQETETETAVELASSSAAM 60

Query: 61  RSCDFEEEEEEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPIAFFA 120
              +     + EECC TPKAERF+IPEIKICPPAPKK+R+FSN +   +LQRPSPIAFFA
Sbjct: 61  AENE-SMSSDLEECC-TPKAERFRIPEIKICPPAPKKQRIFSNCS---NLQRPSPIAFFA 120

Query: 121 SPDIELFFFFSS 133
           SPDIELFFFFSS
Sbjct: 121 SPDIELFFFFSS 125

[Close]

BLAST of CsaV3_1G042810 vs. ExPASy TrEMBL
Match: A0A6M2EGF4 (Uncharacterized protein OS=Populus davidiana OX=266767 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 7.0e-13
Identity = 61/127 (48.03%), Postives = 80/127 (62.99%), Query Frame = 0


Query: 6   GEARRRARKTTTTQLKNKKIK-KNIKNNNIKLEEEEIEKGTSSSTTINFEEKSVSRRSCD 65
           G  R RA+ T  TQ K + +K K+IK  +I +E+      T+++T+ N   K       D
Sbjct: 5   GRKRTRAKTTRRTQYKKRVMKPKSIKEASI-IEDLPSNSSTTTTTSCNGCSKI---DGLD 64

Query: 66  FEEEEEEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPIAFFASPDI 125
           FE  +     CSTPKAERF+IPEI+ CPPAP+K R+     SNCSLQR  PIAFFA PD+
Sbjct: 65  FEGVDISASACSTPKAERFRIPEIQTCPPAPRKERII----SNCSLQR-RPIAFFAPPDL 122

Query: 126 ELFFFFS 132
           ELFFF++
Sbjct: 125 ELFFFYA 122

[Close]

BLAST of CsaV3_1G042810 vs. ExPASy TrEMBL
Match: B9GF02 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G257700 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.2e-12
Identity = 62/128 (48.44%), Postives = 78/128 (60.94%), Query Frame = 0


Query: 6   GEARRRARKTTTTQLKNKKIK-KNIKNNNIKLEEEEIEKGTSSSTTINFEEKSVSR-RSC 65
           G  R RA+ T  TQ K + +K K+IK  +I      IE   S+S+T        S+    
Sbjct: 5   GRKRTRAKTTRRTQYKKRVMKPKSIKEASI------IEDLPSNSSTTTTSCNGCSKIDGL 64

Query: 66  DFEEEEEEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPIAFFASPD 125
           DFE  +     CSTPKAERF+IPEI+ CPPAP+K R+     SNCSLQR  PIAFFA PD
Sbjct: 65  DFEGVDISASACSTPKAERFRIPEIQTCPPAPRKERII----SNCSLQR-RPIAFFAPPD 121

Query: 126 IELFFFFS 132
           +ELFFF++
Sbjct: 125 LELFFFYA 121

[Close]

BLAST of CsaV3_1G042810 vs. ExPASy TrEMBL
Match: A0A7J9M5Q7 (Uncharacterized protein OS=Gossypium schwendimanii OX=34291 GN=Goshw_021036 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.2e-12
Identity = 58/135 (42.96%), Postives = 81/135 (60.00%), Query Frame = 0


Query: 2   ASKRGEARRRARKTTTTQLKNKKIKKNIKNNNIKLEEEEIEKGTSSSTTINFEEKSVS-- 61
           +S+RG+ RR A K   ++ + K +K +I   NI+         TS+S T+      +   
Sbjct: 4   SSRRGKTRRNASKPRRSKYRKKLVKPSI---NIQ---------TSTSATLEDSASKIDDG 63

Query: 62  ---RRSCDFEEEEEEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPI 121
                + + +++      CSTPKA+R++IPEI  CPPAPKKRR   +  SNCSLQR  PI
Sbjct: 64  FALDHNIEGDDDVSTTSPCSTPKAQRYRIPEIHTCPPAPKKRR---SVPSNCSLQRTPPI 123

Query: 122 AFFASPDIELFFFFS 132
           AFFASPD+ELFFFF+
Sbjct: 124 AFFASPDLELFFFFA 123

[Close]

BLAST of CsaV3_1G042810 vs. TAIR 10
Match: AT3G20898.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G51355.1); Has 66 Blast hits to 66 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.5 bits (140), Expect = 4.6e-09
Identity = 30/54 (55.56%), Postives = 39/54 (72.22%), Query Frame = 0


Query: 75  CSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPIAFFASPDIELFF 129
           C TPKA++ +IPE+  CPPAPKK+R+    + NC L+R   I FFA P+IELFF
Sbjct: 54  CCTPKAKKSRIPEMLTCPPAPKKQRV----SKNCVLRR-RQIVFFAPPEIELFF 102

[Close]

BLAST of CsaV3_1G042810 vs. TAIR 10
Match: AT1G51355.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20898.1); Has 52 Blast hits to 52 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.8 bits (107), Expect = 3.1e-05
Identity = 49/131 (37.40%), Postives = 67/131 (51.15%), Query Frame = 0


Query: 1   MASKRGEARRRARKTTTTQLKNKKIKKNIKNNNIKLEEEEIEKGTSSSTTINFEEKSVSR 60
           MASK    ++  R+TTT + K    K      +I  +       TS+S+T      S S 
Sbjct: 1   MASK---GKKPLRRTTTRRRKRSHFKNPSPPCSINSDV------TSTSST------STSP 60

Query: 61  RSCDFEEEEEEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPIAFFA 120
            S         E  C TP  E+ +IPE+  CPPAPKK+++      NC+L+R   IAFFA
Sbjct: 61  TSTATPSPVSAESGCCTP--EKSRIPEMLTCPPAPKKQKV----AQNCALRR-RQIAFFA 109

Query: 121 SPDIELFFFFS 132
            PD+ELFF F+
Sbjct: 121 PPDVELFFVFA 109

[Close]

BLAST of CsaV3_1G042810 vs. TAIR 10
Match: AT5G40460.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27630.1); Has 87 Blast hits to 87 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 4.1e-05
Identity = 28/60 (46.67%), Postives = 34/60 (56.67%), Query Frame = 0


Query: 70  EEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPIAFFASP-DIELFF 129
           EEEEC +TP A+  KIPE+  CPPAP+KRR      SN   +      FF  P D+E  F
Sbjct: 55  EEEECSTTPTAKETKIPELLECPPAPRKRRPALKCRSNVVRE------FFTPPSDLETVF 108

[Close]

BLAST of CsaV3_1G042810 vs. TAIR 10
Match: AT1G60783.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 41.6 bits (96), Expect = 5.9e-04
Identity = 30/94 (31.91%), Postives = 47/94 (50.00%), Query Frame = 0


Query: 37  EEEEIEKGTSSSTTINFEEKSVSRRSCDFEEEEEEEECCSTPKAERFKIPEIKICPPAPK 96
           E  E +K   +  +++   K +S  S      E+E+ C +TP A+  +IP +  CPPAPK
Sbjct: 17  ETTEGKKCVITGISLHSTVKPISLSSSAVSNTEDEDLCPTTPTADSVRIPTVIPCPPAPK 76

Query: 97  KRRLFSNSNSNCSLQRPSPIAFFASPDIELFFFF 131
           KR+L    +         P  FF+ PD+E  F +
Sbjct: 77  KRKLTLKVSY-------GPREFFSPPDLETVFIY 103

The following BLAST results are available for this feature:

BLAST of CsaV3_1G042810 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN66487.1	3.4e-62	100.00	hypothetical protein Csa_006949 [Cucumis sativus]	[more]
KAG6590203.1	7.2e-20	53.62	Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma...	[more]
KAG7022087.1	2.8e-16	49.65	Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma...	[more]
XP_023530358.1	3.7e-16	49.30	cyclin-dependent protein kinase inhibitor SMR9-like [Cucurbita pepo subsp. pepo]...	[more]
XP_022154348.1	6.9e-15	49.24	cyclin-dependent protein kinase inhibitor SMR9-like [Momordica charantia]	[more]

BLAST of CsaV3_1G042810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IWB3	6.5e-08	55.56	Cyclin-dependent protein kinase inhibitor SMR13 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q3ECS5	4.4e-04	37.40	Cyclin-dependent protein kinase inhibitor SMR9 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q29Q81	5.7e-04	46.67	Cyclin-dependent protein kinase inhibitor SMR6 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of CsaV3_1G042810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M041	1.6e-62	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G613590 PE=4 SV=1	[more]
A0A6J1DK32	3.4e-15	49.24	cyclin-dependent protein kinase inhibitor SMR9-like OS=Momordica charantia OX=36...	[more]
A0A6M2EGF4	7.0e-13	48.03	Uncharacterized protein OS=Populus davidiana OX=266767 PE=4 SV=1	[more]
B9GF02	1.2e-12	48.44	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G257700 PE=4 ...	[more]
A0A7J9M5Q7	1.2e-12	42.96	Uncharacterized protein OS=Gossypium schwendimanii OX=34291 GN=Goshw_021036 PE=4...	[more]

BLAST of CsaV3_1G042810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20898.1	4.6e-09	55.56	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G51355.1	3.1e-05	37.40	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G40460.1	4.1e-05	46.67	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G60783.1	5.9e-04	31.91	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 20..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR33142:SF28	SUBFAMILY NOT NAMED	coord: 20..132
IPR040389	Cyclin-dependent protein kinase inhibitor SMR	PANTHER	PTHR33142	CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR13	coord: 20..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G042810.1	CsaV3_1G042810.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032875	regulation of DNA endoreduplication