CsaV3_1G042800 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G042800
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Nuclear transcription factor Y subunit
Location	chr1: 27673273 .. 27678951 (-)
RNA-Seq Expression	CsaV3_1G042800
Synteny	CsaV3_1G042800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAATTATAGAAAGACCCTAAGCACATATCATAAATAAATAAGGCAACAAAAGATCTCGTTAGTAGAACCTTGATTGAGGCGAGAAAATAGGTTGTGAGTAATAGTCAATAAGCACCAAAAATCGGGCAGATTCAACACAATTCATGATCCATTTCGAACCAAAAACCAAGAAGCAAAGCATCGGTTAACCACAACAGTATTGTATGTCAAAGGTTGAGCCCCACCCAACCCAGCTTCCGTGTACCCAATGTTGATGTAAAAAGAAGGGTAGAAGTACATAAAAAAAGAAATGAGAGATGAGAGATGAGAGATGAGGAGGGAGAAAAGAGGAAGATTCTGGTCCAATATAAAAGGCCAAAGAAGTGGAGGAAGCGTCCACGTGGCAAAGAGGAAAGGAGGGAAATAGCTTTGGTAGGACCCAGAGTGGGTGAGATTATCATATCCATAGCTTTGTGATTTAAAAACTCTCTAAAGTTGAAACATTGAAGAGTCTTCTTACTTATAATTTTTCATTTTTGGATTTCACCAAAACGATTAAATTTCAATCTCCCTCTTCTTTTTCTACTTTTCTTTTTTCCTTCCTTTAATTCTTATTATTATTCTTTATTTTATTTTGAATTCTCTCCGATTTCTCTTCTCCCCCATCAGATTTTTCCCTTTTCTCCATTTGGACGTTGCTCCAATTCCTTCCGGTAACCTATTTTTCTTCTTCAATTTCTTTTCCTTTTGTTTTCGCTATCTATGCCTCTTGCTTCCTCTATTTCTCTAATATATCTGGTGTTACATTTCTAGGGTATTCCCGCAATTCCCTTTTTAGGGATTCTTTTCCTCTTTTTCGGGTTTTGGTTTGATTGGTTTTTTTTCTTCTCGGATTTACTTTTGGTTTAGCTGATTCATGTCTGTTATGGATGACAATTCCCGTGCTTCTTTGGGTTTCTTTCAGGGAGGATTTGAGGTGGGTTTTCTTTTTTTTTTTAGGAGGGGTGGGGGGTGGGGGGGTGTTTTTGTAAGGTTACTGGATAATTATGTGTCAGATGATCACCGGTTTGAAACTGGATAAAGCATTTTGAAGATTGTTTTGTTACTTTTGTGTGTGTGTGTGTGTCTGGATTTCCCGATTCTAGCTAGTTCGAGTTACTACAAACAACACTTAGCGGGTGAAATAATTTAAACTCTTTTAACTTATGAAACTAGGATAGCTGTTGATGGGAATTTAGTGAATGAATGTATTTGTACTTTAGTTTCTACTTTAACAACTTAAATGCGATATGAAAGGGGGACCAGAACTGAAGTTATATTACCTGAGATTAATTCTTTCTCTTCTTTGTTTATTTTAATTCTAATCATGCACCAAGTATGCATGACCTGGGACTGTGTTCTCTTGGATCTCTAAACAAGGATAAATAGTTCTATTGGAAGGTGAAGCTTTATCAATTCTCTAGGATTGTGTATGTTTCAGTTTCAGGTTTTACTTAGTTCATTGATTTTGGGTATTAACTGATTGTAAGAATAGGATCTATAAGTTAGTCTTCCTTATTGGTTTTGTTGATTAATTTCAGTTTTAACTTGGAATAAATTCTGGGTTAGCTTTAGGTTTGCTTTTGTTGGTGGGAAATATGCATTTGGTACAGATCTCAGTGACATGATGTGGTTACTGGTTAATACTTTTTTGATGAGTTGTGTTTTCAGATTTTTTTTCTGTCTTTTTGTCTCTCCAACTTAATGTGCTTTGCATTGTTAAATTAATTTTGGGAGAATTTAACCCTAAATTTTAAGAGATGTGAATAGGGGAGTGTAGCCATCCAGGGATCTAAATTGTGTCTGACATATTGCATAAAAATAATGAAACGTGGACAACAATTTAGTCAAAAGGCATTGAAAAGATGTAATAGTACTGGATTGAATCATGAAAAACATTGGTATTGGAAAGATGTAATAGTACAGGACTGAATCATGAGAAATATGCTATTTTTCTGTTTATGTTTTTATGTCTCTCGCAGTTGAAATTACTTTTTACTCCCTGCACTTGCTCAAGTAAAGGAAGAAGAAAACTTTTCTCTAAAGAAAGAGACTAAAGAGTTTGTTTAAAAGCACCCCAACTAGCTGTGCAATTTGGTTCGATGGGGTTCTTTCATTTTGAATTCCATGATAAGGATCTGTGTTAGCTTAACAGTCATCATAAATTAAAAACCTCGAAACAATGAGCGATGGATGATGTCGGAATCTAAGATTTCAATCAATATGGAATAATACTTAAATAAGTAACTGGAGTTAGGAAAGGGTGTTCTTTTCTTTTTCTTTTTTTAACCATTGGTATAAAAGTTTTTATTTTGTGGTAATTGAGAACTTGAGGCTCTTTTGTTTGTTTCAAAGGGTCTGAAGGTATGCAGTCAAAGTCTGAAACCAATAATCAGCTCGATTCAAATGGTGCACCATCGACGAGTATCTATTATGAACCCTGGTGGCGTGGCATGGGGTACAATACTTTTCCATTACCTGTGGTTGGGGGAAATGCTTCCAGTTCAACTTCTCTTGAATTCCCTAATGGTGGTTCGGAGTCAAATGATGGCCAATCTGTGTCTAATAATGATGTAAATGATGAAGAAGATGATGTTTCTAAAGAAGTGCAAGCTACTGGATCTCCACATTCTGGTACATCTTTTAATCCATATTTATTAGTGCAAATTCTCTCTCCGATTAGCACCTCACAGTCCTTGAGTTTCTGTTTTGTGTCTGACAATATTGAATCTATCTTATTTGAAGGGGTTATTATGAAAATGGAGAGAACAACTTTTGTAGAATTATTTTGGGGAAACTCTCTTAAGAAAAGAAAATAAATATATAGCAAGAGATTGACTTTTGGCTGTTCTCAGATATTTGTGTTTGATGGTTCTCAAAAGCAGCAATTCCATTCACAATGATAATTATTAGGTTTACCATATTGGGATTTATTTTTACTACATTGTAACTTACTAAAAATAGGTAACAGAGGAATGTGCAGGGTAAGAAGCTTTCGTATGGATGGTCGAACTCACAAATCGATGAAATATTATTATCATTATATTATTTTATTTTATATATTTTAGAAAAACACCGAATCCCCCCCAAATTAACAGTAACATCTCAATGATTTCAGCGGGAAGCTACAGACAGGATCCTCAGAAGATGCAGCATGTTTCATCCACTTTGCCGGCAATGCACGGTGAATGTCTGGCACAGTCTACACAACTCGAACTTGTTGGTCACTCTATTGTAAGTTCAATTAATGTCCAATCTTAGGAAGTACTTTATCTTGTTACTAAAACTATTGTGCATTTATTCCCTGATTTAAAGTTCCCTCCAACCCCACCCCACCCACCCCACAAAAAAAAAAAAAGAACAAAAAAGAGAAGGTCAAATTACAATTTTGTATTATATTACTGAATAATTTCTTGACGTACTGTTGCAGGCTTGTGCATCAAATCCTTATCAGGATCCATATTATGGAGGAATGATGGCCTTCTATGGTCATCAGCCCTTGGTATGTAATTATCTCGACTTCATACATGCGAGAGATTGGTTTCACTGTCATGATCTTTGCCATTACTTGCTTGTGCTCATCTATTATACTTTTGAAATCAAAAGAAAAATGACACTTCTAATTAACACATTGACCCTATTGAGAAATGGAACTTCAAGTCCCACTGCTAAAGGGTTCAGGTCCAACTTCATGAAAATTGGTGCTTTTGCTTCTATATCCGTGAAATGAATGTTGTCAAAAATCAGTTAACTTTTTGTATTTTCTTCTAAGGTTGTTTTCGTGGATATTTCATGAAATATTATATTCACTGTGGAGTGGTAAAATGTTGTTGATTTGAATTAGGACCTACACTTTTACATCCAATGCTCTTCAAACCAGGATTAGCTTGCTCAAAGGACAATGCTTGTGAAATTTATACTTTCTCATTCAAATTTTATTATTCACTATGTAGTTTGTCTCCAGGGGTTTTTTACATTTTGTTCTTCAATTTTCATTTATTTAATGAAGGCTGCTCTTTTTTTTTTTATATATGTTTTTTCTAAATCCTAAAAGAAACGTATGTCATCCAGTATAGCTTTGGAATACACATAGCATTGATGTTTCCATTGCATGAAGTCTTAACAAAATTTTCATGCTTTGTAGTTTATTTTTGTCATGGACAGGGCTATCCCATGGTTGGAGGACCACATGCTAGAATGCCATTGCCCATTGAGATAGCACAAGACCCCGTTTTTGTGAATGCAAAGCAATACCAGGGAATTTTGAGGCGAAGGCAAGCACGTGCAAAAGCTGAGGCTGAGAAGAAATCAATAAAAGCCAGAAAGGTGGATTTTGTGTCTTTCGAGTGGACTAGATTGTTATTGTGCATGCGTGTGTAAGGGGTGGGGGATGCTTGACTTTCTGAATTTTTATGAGTAATCTTTTAAGCAATTATCAAATCAAGATTTATATGCTCTTATAGACAATATCGATAGGTAGAATTGGGATATAGATTTAGCTCATACTGGTTCATGTTTAATATCTTGTAAAACTTGTAGCACTAGTTGACATGTTATTGTTCTAGTTTTCTATTTGCTATCTAAACAAGTTAAAAAATCAACCAACTGCCAGTATTTTAGTTAATAGCCCAGGAGTTATTTTATAAACGCTTAGGCTTAATTGCTCATCATATTTTACAACCACTAAATCAATCATAGTTAACCTCACTCGCAAAAATCCATTTTTTTTTTGGGTTATGTTGCTCACTTTTCTTATTTAACAGCCATACCTTCATGAGTCTAGACACCAGCATGCCATTAGAAGGTCGAGAAGTAGTGGAGGTCGTTTTGCGAAGAAAAGCGAAGCTGAGGGAAAGGAAAAGCATTCTGATAAAGTAAACGAGAGTGATTACCGCCTAAATGACGGTTCTGAACAGCAGAACGGAAGCTCCTTGACGAACAAGGCCTCTGAGTAGCAAAGCAACCTGCACTGAATGCCAAGACAATGGCCAGAGTTGTTCAGTGGGGAATGAGGGATCAATTGCTTGTTTGTTAGAAGTACTGAGTTCCTAGCAAAGCATGCTAGGCGGCAAATCATTCTTGGCTTTGTTGTTCTGTTGCTTTGTAGAAAAAGAAAAAGGGATGGTGAATGATATGTGTGACTTATAGGATCTCATGACTTCTTCAAAGGATTCCTCAAAAGTCTAAGAGATTTCTTCATTCCATTCTCCTTTTTTGCCTTTTTTGTACATAGTTTATGATGACGTAAGGGAGTGAGAACTTTGGTCTCTTGTATTATATTAGCAGTGCGTGAAACTAAATGAATCATAAGGCTTAGGATAGATACAGTGATTGTGATTCACAAAGCTTAGACTTGAAAGATTTTAGATTTGAGTATCTAAGGTTTGACGGATTATTGATGCAAATTATAGTTTTCAGGTACAGAAATGGATAGAGTTTAAATGGCTTCCTTCAGCTTTGACTATGACTTGTTTTAAAGCCAAAGGATATTTTGTGTATGGAAGGGAAGGATTAATGGATGCATCTCACCCATTTGGAATTCATCCACCTTGAAACAGGATGGCTCAATCTATTCTTCTTACTATTTCATGGGTCTTTCCACATTATTTTTTATTGAAGATTTTACATTCTCAACCTTCTCTTTTACAAATTGGATGCGCA

mRNA sequence

ATGCAGTCAAAGTCTGAAACCAATAATCAGCTCGATTCAAATGGTGCACCATCGACGAGTATCTATTATGAACCCTGGTGGCGTGGCATGGGGTACAATACTTTTCCATTACCTGTGGTTGGGGGAAATGCTTCCAGTTCAACTTCTCTTGAATTCCCTAATGGTGGTTCGGAGTCAAATGATGGCCAATCTGTGTCTAATAATGATGTAAATGATGAAGAAGATGATGTTTCTAAAGAAGTGCAAGCTACTGGATCTCCACATTCTGCGGGAAGCTACAGACAGGATCCTCAGAAGATGCAGCATGTTTCATCCACTTTGCCGGCAATGCACGGTGAATGTCTGGCACAGTCTACACAACTCGAACTTGTTGGTCACTCTATTGCTTGTGCATCAAATCCTTATCAGGATCCATATTATGGAGGAATGATGGCCTTCTATGGTCATCAGCCCTTGGGCTATCCCATGGTTGGAGGACCACATGCTAGAATGCCATTGCCCATTGAGATAGCACAAGACCCCGTTTTTGTGAATGCAAAGCAATACCAGGGAATTTTGAGGCGAAGGCAAGCACGTGCAAAAGCTGAGGCTGAGAAGAAATCAATAAAAGCCAGAAAGCCATACCTTCATGAGTCTAGACACCAGCATGCCATTAGAAGGTCGAGAAGTAGTGGAGGTCGTTTTGCGAAGAAAAGCGAAGCTGAGGGAAAGGAAAAGCATTCTGATAAAGTAAACGAGAGTGATTACCGCCTAAATGACGGTTCTGAACAGCAGAACGGAAGCTCCTTGACGAACAAGGCCTCTGAGTAG

Coding sequence (CDS)

ATGCAGTCAAAGTCTGAAACCAATAATCAGCTCGATTCAAATGGTGCACCATCGACGAGTATCTATTATGAACCCTGGTGGCGTGGCATGGGGTACAATACTTTTCCATTACCTGTGGTTGGGGGAAATGCTTCCAGTTCAACTTCTCTTGAATTCCCTAATGGTGGTTCGGAGTCAAATGATGGCCAATCTGTGTCTAATAATGATGTAAATGATGAAGAAGATGATGTTTCTAAAGAAGTGCAAGCTACTGGATCTCCACATTCTGCGGGAAGCTACAGACAGGATCCTCAGAAGATGCAGCATGTTTCATCCACTTTGCCGGCAATGCACGGTGAATGTCTGGCACAGTCTACACAACTCGAACTTGTTGGTCACTCTATTGCTTGTGCATCAAATCCTTATCAGGATCCATATTATGGAGGAATGATGGCCTTCTATGGTCATCAGCCCTTGGGCTATCCCATGGTTGGAGGACCACATGCTAGAATGCCATTGCCCATTGAGATAGCACAAGACCCCGTTTTTGTGAATGCAAAGCAATACCAGGGAATTTTGAGGCGAAGGCAAGCACGTGCAAAAGCTGAGGCTGAGAAGAAATCAATAAAAGCCAGAAAGCCATACCTTCATGAGTCTAGACACCAGCATGCCATTAGAAGGTCGAGAAGTAGTGGAGGTCGTTTTGCGAAGAAAAGCGAAGCTGAGGGAAAGGAAAAGCATTCTGATAAAGTAAACGAGAGTGATTACCGCCTAAATGACGGTTCTGAACAGCAGAACGGAAGCTCCTTGACGAACAAGGCCTCTGAGTAG

Protein sequence

MQSKSETNNQLDSNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKMQHVSSTLPAMHGECLAQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKHSDKVNESDYRLNDGSEQQNGSSLTNKASE*

Homology

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BLAST of CsaV3_1G042800 vs. NCBI nr
Match: XP_004139033.1 (nuclear transcription factor Y subunit A-1 [Cucumis sativus] >XP_031735950.1 nuclear transcription factor Y subunit A-1 [Cucumis sativus] >KGN66486.1 hypothetical protein Csa_007630 [Cucumis sativus])

HSP 1 Score: 525.4 bits (1352), Expect = 2.9e-145
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 1   MQSKSETNNQLDSNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 60
           MQSKSETNNQLDSNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN
Sbjct: 1   MQSKSETNNQLDSNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 60

Query: 61  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKMQHVSSTLPAMHGECLAQSTQ 120
           DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKMQHVSSTLPAMHGECLAQSTQ
Sbjct: 61  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKMQHVSSTLPAMHGECLAQSTQ 120

Query: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180
           LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK
Sbjct: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180

Query: 181 QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKH 240
           QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKH
Sbjct: 181 QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKH 240

Query: 241 SDKVNESDYRLNDGSEQQNGSSLTNKASE 270
           SDKVNESDYRLNDGSEQQNGSSLTNKASE
Sbjct: 241 SDKVNESDYRLNDGSEQQNGSSLTNKASE 269

[Close]

BLAST of CsaV3_1G042800 vs. NCBI nr
Match: XP_008450423.1 (PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis melo] >XP_008450424.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis melo] >KAA0056302.1 nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis melo var. makuwa] >TYK18850.1 nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 506.9 bits (1304), Expect = 1.1e-139
Identity = 260/269 (96.65%), Postives = 263/269 (97.77%), Query Frame = 0


Query: 1   MQSKSETNNQLDSNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 60
           MQSKSETNNQLD NGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN
Sbjct: 1   MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 60

Query: 61  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKMQHVSSTLPAMHGECLAQSTQ 120
           DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +KMQHVSSTLPAMHGECL QSTQ
Sbjct: 61  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKMQHVSSTLPAMHGECLTQSTQ 120

Query: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180
           LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK
Sbjct: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180

Query: 181 QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKH 240
           QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEA+GKEKH
Sbjct: 181 QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKH 240

Query: 241 SDKVNESDYRLNDGSEQQNGSSLTNKASE 270
           SDKV+ES YRLNDGSEQQ GSSL NKASE
Sbjct: 241 SDKVSESGYRLNDGSEQQKGSSLMNKASE 269

[Close]

BLAST of CsaV3_1G042800 vs. NCBI nr
Match: XP_008450422.1 (PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Cucumis melo])

HSP 1 Score: 506.9 bits (1304), Expect = 1.1e-139
Identity = 260/269 (96.65%), Postives = 263/269 (97.77%), Query Frame = 0


Query: 1   MQSKSETNNQLDSNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 60
           MQSKSETNNQLD NGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN
Sbjct: 22  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 81

Query: 61  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKMQHVSSTLPAMHGECLAQSTQ 120
           DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +KMQHVSSTLPAMHGECL QSTQ
Sbjct: 82  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKMQHVSSTLPAMHGECLTQSTQ 141

Query: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180
           LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK
Sbjct: 142 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 201

Query: 181 QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKH 240
           QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEA+GKEKH
Sbjct: 202 QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKH 261

Query: 241 SDKVNESDYRLNDGSEQQNGSSLTNKASE 270
           SDKV+ES YRLNDGSEQQ GSSL NKASE
Sbjct: 262 SDKVSESGYRLNDGSEQQKGSSLMNKASE 290

[Close]

BLAST of CsaV3_1G042800 vs. NCBI nr
Match: XP_038879324.1 (nuclear transcription factor Y subunit A-1-like [Benincasa hispida])

HSP 1 Score: 496.5 bits (1277), Expect = 1.4e-136
Identity = 256/269 (95.17%), Postives = 260/269 (96.65%), Query Frame = 0


Query: 1   MQSKSETNNQLDSNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 60
           MQSKSETNNQLD NGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN
Sbjct: 1   MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 60

Query: 61  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKMQHVSSTLPAMHGECLAQSTQ 120
           DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD QKMQHVSSTLPAMHGECL QSTQ
Sbjct: 61  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDAQKMQHVSSTLPAMHGECLTQSTQ 120

Query: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180
           LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK
Sbjct: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180

Query: 181 QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKH 240
           QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKK+E +GK   
Sbjct: 181 QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKNEVDGK--- 240

Query: 241 SDKVNESDYRLNDGSEQQNGSSLTNKASE 270
            DKVNES YRLN+GSEQQNGSSLTN+ASE
Sbjct: 241 -DKVNESGYRLNEGSEQQNGSSLTNRASE 265

[Close]

BLAST of CsaV3_1G042800 vs. NCBI nr
Match: XP_022154358.1 (nuclear transcription factor Y subunit A-1-like [Momordica charantia])

HSP 1 Score: 465.3 bits (1196), Expect = 3.6e-127
Identity = 241/271 (88.93%), Postives = 249/271 (91.88%), Query Frame = 0


Query: 1   MQSKSETNNQLDS--NGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSE 60
           MQSKSETNNQL+S  NGAPSTS+YYEPWWRG+GYN  PLPVVGGN SSSTSLEFPNGGSE
Sbjct: 1   MQSKSETNNQLESDPNGAPSTSLYYEPWWRGIGYNPIPLPVVGGNVSSSTSLEFPNGGSE 60

Query: 61  SNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKMQHVSSTLPAMHGECLAQS 120
           SNDGQSVSNND+NDEEDDV+KEVQATGSPHSAGSYR D QKMQHVSSTLPAMHGEC  QS
Sbjct: 61  SNDGQSVSNNDLNDEEDDVTKEVQATGSPHSAGSYRLDAQKMQHVSSTLPAMHGECPTQS 120

Query: 121 TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVN 180
           TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLPIEIAQDPVFVN
Sbjct: 121 TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVN 180

Query: 181 AKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKE 240
           AKQYQGILRRRQARAKAEAEKK IKARKPYLHESRHQHAIRR+R SGGRFAKK EA   E
Sbjct: 181 AKQYQGILRRRQARAKAEAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKDEANENE 240

Query: 241 KHSDKVNESDYRLNDGSEQQNGSSLTNKASE 270
            HSDK NES Y LNDGSEQ+NGSS  NKAS+
Sbjct: 241 MHSDKANESGYCLNDGSEQRNGSSSMNKASQ 271

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BLAST of CsaV3_1G042800 vs. ExPASy Swiss-Prot
Match: Q9LXV5 (Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NFYA1 PE=2 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.4e-49
Identity = 128/263 (48.67%), Postives = 163/263 (61.98%), Query Frame = 0


Query: 1   MQSKSETNNQLDSN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGS 60
           MQSK    N+ + N         +Y EPWW+   +   P     G  S+S+SL+ PN GS
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPN-GS 60

Query: 61  ESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQDPQKMQHVSSTLPAMHGECLA 120
           ESND  S S +  +N E D   K+ QA  S  S  ++  +       + ++  MH + L 
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEG---NDPALSIRNMHDQPLV 120

Query: 121 QSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPV 180
           Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV
Sbjct: 121 QPP--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPV 180

Query: 181 FVNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAE 240
           +VNAKQY+GILRRR+ARAKAE E+K I+ RKPYLHESRH+HA+RR+R+SGGRFAKKSE E
Sbjct: 181 YVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVE 240

Query: 241 GKEKHSDKVNESDYRLN-DGSEQ 258
             E    +  E     N  GSEQ
Sbjct: 241 AGEDAGGRDRERGSATNSSGSEQ 257

[Close]

BLAST of CsaV3_1G042800 vs. ExPASy Swiss-Prot
Match: Q945M9 (Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NFYA9 PE=1 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 8.4e-47
Identity = 138/282 (48.94%), Postives = 166/282 (58.87%), Query Frame = 0


Query: 1   MQSKSET-NNQLDS--NGAPSTSI-YYEPWWR-GMGYNTFPLPVVGGNASSSTSLEFPNG 60
           M SKS++  N++DS  +G  S+SI    PW R     N       G  +S S +L     
Sbjct: 6   MHSKSDSGGNKVDSEVHGTVSSSINSLNPWHRAAAACNANSSVEAGDKSSKSIALAL--- 65

Query: 61  GSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKMQHVSSTLPAMHGECL 120
             ESN  +S SN D     + V+KE Q T SP SAG Y    Q+  H   T P  H    
Sbjct: 66  --ESNGSKSPSNRD-----NTVNKESQVTTSPQSAGDYSDKNQESLHHGITQPPPHP--- 125

Query: 121 AQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGYPMVGG-PHARMPLPIEIAQD 180
                 +LVGH++  A SNPYQDPYY G+M  YGH PLG+   GG PH+RMPLP E+AQ+
Sbjct: 126 ------QLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEMAQE 185

Query: 181 PVFVNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSE 240
           PVFVNAKQYQ ILRRRQARAKAE EKK IK+RKPYLHESRHQHA+RR R +GGRFAKK+ 
Sbjct: 186 PVFVNAKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRFAKKTN 245

Query: 241 AE-----GKEKHSDKVNESDYRLN-DGSEQQNGSSLTNKASE 270
            E      +EK +  V +S    N D  E  NG   T +  E
Sbjct: 246 TEASKRKAEEKSNGHVTQSPSSSNSDQGEAWNGDYRTPQGDE 268

[Close]

BLAST of CsaV3_1G042800 vs. ExPASy Swiss-Prot
Match: Q84JP1 (Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NFYA7 PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 4.2e-22
Identity = 77/182 (42.31%), Postives = 101/182 (55.49%), Query Frame = 0


Query: 91  GSYRQDPQKMQHVSSTLP-AMHGECLAQSTQLELVG--HSIACASNPYQDPYYGGMMAFY 150
           GS+ +  Q+  H    +P A + E +  S      G  +S+A    PY DPYY  + A  
Sbjct: 13  GSHEKQEQRDSHFQPPIPSARNYESIVTSLVYSDPGTTNSMAPGQYPYPDPYYRSIFAPP 72

Query: 151 GHQPLG--YPMVGGPHARMPLPIEIAQDPVFVNAKQYQGILRRRQARAKAEAEKKSIKAR 210
                G    ++G     +PLP +  ++PVFVNAKQY GILRRRQ+RA+ E++ K IK+R
Sbjct: 73  PQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYHGILRRRQSRARLESQNKVIKSR 132

Query: 211 KPYLHESRHQHAIRRSRSSGGRF--AKKSEAEGKEKHSDKVNESDYRLNDGSEQQNGSSL 266
           KPYLHESRH HAIRR R  GGRF  AKK +    E H D  +E    L+ G      SS 
Sbjct: 133 KPYLHESRHLHAIRRPRGCGGRFLNAKKED----EHHEDSSHEEKSNLSAGKSAMAASSG 190

[Close]

BLAST of CsaV3_1G042800 vs. ExPASy Swiss-Prot
Match: Q8VY64 (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NFYA4 PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 6.1e-21
Identity = 62/140 (44.29%), Postives = 80/140 (57.14%), Query Frame = 0


Query: 134 PYQDPYYGGMMAFYGHQPLGYP-----MVGGPHARMPLPIEIAQDPVFVNAKQYQGILRR 193
           PY DPYY  + A   + P  YP     ++G     +PL  +  ++PVFVNAKQY GILRR
Sbjct: 54  PYPDPYYRSVFAQQAYLPHPYPGVQLQLMGMQQPGVPLQCDAVEEPVFVNAKQYHGILRR 113

Query: 194 RQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKHSDKVNESD 253
           RQ+RAK EA  ++IKA+KPY+HESRH HAIRR R  GGRF    +  G  K  ++   SD
Sbjct: 114 RQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKENGDHKEEEEAT-SD 173

Query: 254 YRLNDGSEQQNGSSLTNKAS 269
              ++ S       L    S
Sbjct: 174 ENTSEASSSLRSEKLAMATS 192

[Close]

BLAST of CsaV3_1G042800 vs. ExPASy Swiss-Prot
Match: Q93ZH2 (Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana OX=3702 GN=NFYA3 PE=2 SV=2)

HSP 1 Score: 89.7 bits (221), Expect = 5.3e-17
Identity = 87/262 (33.21%), Postives = 125/262 (47.71%), Query Frame = 0


Query: 30  MGYNTFPLPVVGGNASSSTSLEFPNGGSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHS 89
           + +   P   V     S+ SL       +S  G   +   ++ ++ D S   Q+TG  ++
Sbjct: 24  ISWGVVPTDSVANRRGSAESLSLK---VDSRPGHIQTTKQISFQDQD-SSSTQSTGQSYT 83

Query: 90  AGSYRQDPQKMQHVSSTLPAMHGECLAQ-------STQLELVG----HSIACASN---PY 149
             +   D    + +S    A  G  + Q         Q  + G    H     +N    Y
Sbjct: 84  EVASSGDDNPSRQIS--FSAKSGSEITQRKGFASNPKQGSMTGFPNIHFAPAQANFSFHY 143

Query: 150 QDPYYGGMMA--FYGHQPLGYP-MVGGPHARMPLPIEIAQ-DPVFVNAKQYQGILRRRQA 209
            DP+YGG++A  +    P   P MV     R+PLP E+ + DPVFVNAKQY  I+RRRQ 
Sbjct: 144 ADPHYGGLLAATYLPQAPTCNPQMVSMIPGRVPLPAELTETDPVFVNAKQYHAIMRRRQQ 203

Query: 210 RAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRF-------AKKSEAEGKEKHSDKV 267
           RAK EA+ K I+ARKPYLHESRH HA++R R SGGRF        +  +A  +E+  DK+
Sbjct: 204 RAKLEAQNKLIRARKPYLHESRHVHALKRPRGSGGRFLNTKKLLQESEQAAAREQEQDKL 263

[Close]

BLAST of CsaV3_1G042800 vs. ExPASy TrEMBL
Match: A0A0A0M2S3 (Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_1G613580 PE=3 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 1.4e-145
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 1   MQSKSETNNQLDSNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 60
           MQSKSETNNQLDSNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN
Sbjct: 1   MQSKSETNNQLDSNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 60

Query: 61  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKMQHVSSTLPAMHGECLAQSTQ 120
           DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKMQHVSSTLPAMHGECLAQSTQ
Sbjct: 61  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKMQHVSSTLPAMHGECLAQSTQ 120

Query: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180
           LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK
Sbjct: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180

Query: 181 QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKH 240
           QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKH
Sbjct: 181 QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKH 240

Query: 241 SDKVNESDYRLNDGSEQQNGSSLTNKASE 270
           SDKVNESDYRLNDGSEQQNGSSLTNKASE
Sbjct: 241 SDKVNESDYRLNDGSEQQNGSSLTNKASE 269

[Close]

BLAST of CsaV3_1G042800 vs. ExPASy TrEMBL
Match: A0A1S3BPV3 (Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103492032 PE=3 SV=1)

HSP 1 Score: 506.9 bits (1304), Expect = 5.2e-140
Identity = 260/269 (96.65%), Postives = 263/269 (97.77%), Query Frame = 0


Query: 1   MQSKSETNNQLDSNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 60
           MQSKSETNNQLD NGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN
Sbjct: 1   MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 60

Query: 61  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKMQHVSSTLPAMHGECLAQSTQ 120
           DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +KMQHVSSTLPAMHGECL QSTQ
Sbjct: 61  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKMQHVSSTLPAMHGECLTQSTQ 120

Query: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180
           LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK
Sbjct: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180

Query: 181 QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKH 240
           QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEA+GKEKH
Sbjct: 181 QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKH 240

Query: 241 SDKVNESDYRLNDGSEQQNGSSLTNKASE 270
           SDKV+ES YRLNDGSEQQ GSSL NKASE
Sbjct: 241 SDKVSESGYRLNDGSEQQKGSSLMNKASE 269

[Close]

BLAST of CsaV3_1G042800 vs. ExPASy TrEMBL
Match: A0A5D3D5Q2 (Nuclear transcription factor Y subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00430 PE=3 SV=1)

HSP 1 Score: 506.9 bits (1304), Expect = 5.2e-140
Identity = 260/269 (96.65%), Postives = 263/269 (97.77%), Query Frame = 0


Query: 1   MQSKSETNNQLDSNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 60
           MQSKSETNNQLD NGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN
Sbjct: 1   MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 60

Query: 61  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKMQHVSSTLPAMHGECLAQSTQ 120
           DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +KMQHVSSTLPAMHGECL QSTQ
Sbjct: 61  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKMQHVSSTLPAMHGECLTQSTQ 120

Query: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180
           LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK
Sbjct: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180

Query: 181 QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKH 240
           QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEA+GKEKH
Sbjct: 181 QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKH 240

Query: 241 SDKVNESDYRLNDGSEQQNGSSLTNKASE 270
           SDKV+ES YRLNDGSEQQ GSSL NKASE
Sbjct: 241 SDKVSESGYRLNDGSEQQKGSSLMNKASE 269

[Close]

BLAST of CsaV3_1G042800 vs. ExPASy TrEMBL
Match: A0A1S3BP85 (Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103492032 PE=3 SV=1)

HSP 1 Score: 506.9 bits (1304), Expect = 5.2e-140
Identity = 260/269 (96.65%), Postives = 263/269 (97.77%), Query Frame = 0


Query: 1   MQSKSETNNQLDSNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 60
           MQSKSETNNQLD NGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN
Sbjct: 22  MQSKSETNNQLDPNGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSESN 81

Query: 61  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKMQHVSSTLPAMHGECLAQSTQ 120
           DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQD +KMQHVSSTLPAMHGECL QSTQ
Sbjct: 82  DGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDTRKMQHVSSTLPAMHGECLTQSTQ 141

Query: 121 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 180
           LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK
Sbjct: 142 LELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVNAK 201

Query: 181 QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKEKH 240
           QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEA+GKEKH
Sbjct: 202 QYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEADGKEKH 261

Query: 241 SDKVNESDYRLNDGSEQQNGSSLTNKASE 270
           SDKV+ES YRLNDGSEQQ GSSL NKASE
Sbjct: 262 SDKVSESGYRLNDGSEQQKGSSLMNKASE 290

[Close]

BLAST of CsaV3_1G042800 vs. ExPASy TrEMBL
Match: A0A6J1DK42 (Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC111021642 PE=3 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 1.7e-127
Identity = 241/271 (88.93%), Postives = 249/271 (91.88%), Query Frame = 0


Query: 1   MQSKSETNNQLDS--NGAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGSE 60
           MQSKSETNNQL+S  NGAPSTS+YYEPWWRG+GYN  PLPVVGGN SSSTSLEFPNGGSE
Sbjct: 1   MQSKSETNNQLESDPNGAPSTSLYYEPWWRGIGYNPIPLPVVGGNVSSSTSLEFPNGGSE 60

Query: 61  SNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKMQHVSSTLPAMHGECLAQS 120
           SNDGQSVSNND+NDEEDDV+KEVQATGSPHSAGSYR D QKMQHVSSTLPAMHGEC  QS
Sbjct: 61  SNDGQSVSNNDLNDEEDDVTKEVQATGSPHSAGSYRLDAQKMQHVSSTLPAMHGECPTQS 120

Query: 121 TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGGPHARMPLPIEIAQDPVFVN 180
           TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVG PHARMPLPIEIAQDPVFVN
Sbjct: 121 TQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGYPMVGAPHARMPLPIEIAQDPVFVN 180

Query: 181 AKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAEGKE 240
           AKQYQGILRRRQARAKAEAEKK IKARKPYLHESRHQHAIRR+R SGGRFAKK EA   E
Sbjct: 181 AKQYQGILRRRQARAKAEAEKKLIKARKPYLHESRHQHAIRRTRGSGGRFAKKDEANENE 240

Query: 241 KHSDKVNESDYRLNDGSEQQNGSSLTNKASE 270
            HSDK NES Y LNDGSEQ+NGSS  NKAS+
Sbjct: 241 MHSDKANESGYCLNDGSEQRNGSSSMNKASQ 271

[Close]

BLAST of CsaV3_1G042800 vs. TAIR 10
Match: AT5G12840.1 (nuclear factor Y, subunit A1 )

HSP 1 Score: 198.0 bits (502), Expect = 9.9e-51
Identity = 128/263 (48.67%), Postives = 163/263 (61.98%), Query Frame = 0


Query: 1   MQSKSETNNQLDSN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGS 60
           MQSK    N+ + N         +Y EPWW+   +   P     G  S+S+SL+ PN GS
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPN-GS 60

Query: 61  ESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQDPQKMQHVSSTLPAMHGECLA 120
           ESND  S S +  +N E D   K+ QA  S  S  ++  +       + ++  MH + L 
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEG---NDPALSIRNMHDQPLV 120

Query: 121 QSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPV 180
           Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV
Sbjct: 121 QPP--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPV 180

Query: 181 FVNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAE 240
           +VNAKQY+GILRRR+ARAKAE E+K I+ RKPYLHESRH+HA+RR+R+SGGRFAKKSE E
Sbjct: 181 YVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVE 240

Query: 241 GKEKHSDKVNESDYRLN-DGSEQ 258
             E    +  E     N  GSEQ
Sbjct: 241 AGEDAGGRDRERGSATNSSGSEQ 257

[Close]

BLAST of CsaV3_1G042800 vs. TAIR 10
Match: AT5G12840.3 (nuclear factor Y, subunit A1 )

HSP 1 Score: 198.0 bits (502), Expect = 9.9e-51
Identity = 128/263 (48.67%), Postives = 163/263 (61.98%), Query Frame = 0


Query: 1   MQSKSETNNQLDSN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGS 60
           MQSK    N+ + N         +Y EPWW+   +   P     G  S+S+SL+ PN GS
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPN-GS 60

Query: 61  ESNDGQSVSNND-VNDEEDDVSKEVQATGSPHSAGSYRQDPQKMQHVSSTLPAMHGECLA 120
           ESND  S S +  +N E D   K+ QA  S  S  ++  +       + ++  MH + L 
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEG---NDPALSIRNMHDQPLV 120

Query: 121 QSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQDPV 180
           Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+PV
Sbjct: 121 QPP--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPV 180

Query: 181 FVNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSEAE 240
           +VNAKQY+GILRRR+ARAKAE E+K I+ RKPYLHESRH+HA+RR+R+SGGRFAKKSE E
Sbjct: 181 YVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVE 240

Query: 241 GKEKHSDKVNESDYRLN-DGSEQ 258
             E    +  E     N  GSEQ
Sbjct: 241 AGEDAGGRDRERGSATNSSGSEQ 257

[Close]

BLAST of CsaV3_1G042800 vs. TAIR 10
Match: AT5G12840.2 (nuclear factor Y, subunit A1 )

HSP 1 Score: 197.6 bits (501), Expect = 1.3e-50
Identity = 131/265 (49.43%), Postives = 163/265 (61.51%), Query Frame = 0


Query: 1   MQSKSETNNQLDSN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGS 60
           MQSK    N+ + N         +Y EPWW+   +   P     G  S+S+SL+ PN GS
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPN-GS 60

Query: 61  ESNDGQSVSNND-VNDEEDDVSKEVQATGSPHS--AGSYRQDPQKMQHVSSTLPAMHGEC 120
           ESND  S S +  +N E D   K+ QA  S  S   G    DP      + ++  MH + 
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSDNHGMEGNDP------ALSIRNMHDQP 120

Query: 121 LAQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQD 180
           L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+
Sbjct: 121 LVQPP--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQE 180

Query: 181 PVFVNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSE 240
           PV+VNAKQY+GILRRR+ARAKAE E+K I+ RKPYLHESRH+HA+RR+R+SGGRFAKKSE
Sbjct: 181 PVYVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSE 240

Query: 241 AEGKEKHSDKVNESDYRLN-DGSEQ 258
            E  E    +  E     N  GSEQ
Sbjct: 241 VEAGEDAGGRDRERGSATNSSGSEQ 256

[Close]

BLAST of CsaV3_1G042800 vs. TAIR 10
Match: AT5G12840.4 (nuclear factor Y, subunit A1 )

HSP 1 Score: 197.6 bits (501), Expect = 1.3e-50
Identity = 131/265 (49.43%), Postives = 163/265 (61.51%), Query Frame = 0


Query: 1   MQSKSETNNQLDSN---GAPSTSIYYEPWWRGMGYNTFPLPVVGGNASSSTSLEFPNGGS 60
           MQSK    N+ + N         +Y EPWW+   +   P     G  S+S+SL+ PN GS
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPN-GS 60

Query: 61  ESNDGQSVSNND-VNDEEDDVSKEVQATGSPHS--AGSYRQDPQKMQHVSSTLPAMHGEC 120
           ESND  S S +  +N E D   K+ QA  S  S   G    DP      + ++  MH + 
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSDNHGMEGNDP------ALSIRNMHDQP 120

Query: 121 LAQSTQLELVGHSIACASNPYQDPYYGGMMAFYGHQPLGY-PMVGGPHARMPLPIEIAQD 180
           L Q    ELVGH IAC  NPYQDPYYGG+M  YGHQ LG+ P +G P  R  LP+++AQ+
Sbjct: 121 LVQPP--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQE 180

Query: 181 PVFVNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSE 240
           PV+VNAKQY+GILRRR+ARAKAE E+K I+ RKPYLHESRH+HA+RR+R+SGGRFAKKSE
Sbjct: 181 PVYVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSE 240

Query: 241 AEGKEKHSDKVNESDYRLN-DGSEQ 258
            E  E    +  E     N  GSEQ
Sbjct: 241 VEAGEDAGGRDRERGSATNSSGSEQ 256

[Close]

BLAST of CsaV3_1G042800 vs. TAIR 10
Match: AT3G20910.1 (nuclear factor Y, subunit A9 )

HSP 1 Score: 188.7 bits (478), Expect = 6.0e-48
Identity = 138/282 (48.94%), Postives = 166/282 (58.87%), Query Frame = 0


Query: 1   MQSKSET-NNQLDS--NGAPSTSI-YYEPWWR-GMGYNTFPLPVVGGNASSSTSLEFPNG 60
           M SKS++  N++DS  +G  S+SI    PW R     N       G  +S S +L     
Sbjct: 6   MHSKSDSGGNKVDSEVHGTVSSSINSLNPWHRAAAACNANSSVEAGDKSSKSIALAL--- 65

Query: 61  GSESNDGQSVSNNDVNDEEDDVSKEVQATGSPHSAGSYRQDPQKMQHVSSTLPAMHGECL 120
             ESN  +S SN D     + V+KE Q T SP SAG Y    Q+  H   T P  H    
Sbjct: 66  --ESNGSKSPSNRD-----NTVNKESQVTTSPQSAGDYSDKNQESLHHGITQPPPHP--- 125

Query: 121 AQSTQLELVGHSIACA-SNPYQDPYYGGMMAFYGHQPLGYPMVGG-PHARMPLPIEIAQD 180
                 +LVGH++  A SNPYQDPYY G+M  YGH PLG+   GG PH+RMPLP E+AQ+
Sbjct: 126 ------QLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEMAQE 185

Query: 181 PVFVNAKQYQGILRRRQARAKAEAEKKSIKARKPYLHESRHQHAIRRSRSSGGRFAKKSE 240
           PVFVNAKQYQ ILRRRQARAKAE EKK IK+RKPYLHESRHQHA+RR R +GGRFAKK+ 
Sbjct: 186 PVFVNAKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRFAKKTN 245

Query: 241 AE-----GKEKHSDKVNESDYRLN-DGSEQQNGSSLTNKASE 270
            E      +EK +  V +S    N D  E  NG   T +  E
Sbjct: 246 TEASKRKAEEKSNGHVTQSPSSSNSDQGEAWNGDYRTPQGDE 268

The following BLAST results are available for this feature:

BLAST of CsaV3_1G042800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139033.1	2.9e-145	100.00	nuclear transcription factor Y subunit A-1 [Cucumis sativus] >XP_031735950.1 nuc...	[more]
XP_008450423.1	1.1e-139	96.65	PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis m...	[more]
XP_008450422.1	1.1e-139	96.65	PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Cucumis m...	[more]
XP_038879324.1	1.4e-136	95.17	nuclear transcription factor Y subunit A-1-like [Benincasa hispida]	[more]
XP_022154358.1	3.6e-127	88.93	nuclear transcription factor Y subunit A-1-like [Momordica charantia]	[more]

BLAST of CsaV3_1G042800 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LXV5	1.4e-49	48.67	Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q945M9	8.4e-47	48.94	Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q84JP1	4.2e-22	42.31	Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q8VY64	6.1e-21	44.29	Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q93ZH2	5.3e-17	33.21	Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of CsaV3_1G042800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M2S3	1.4e-145	100.00	Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_1G61358...	[more]
A0A1S3BPV3	5.2e-140	96.65	Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103492032 P...	[more]
A0A5D3D5Q2	5.2e-140	96.65	Nuclear transcription factor Y subunit OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3BP85	5.2e-140	96.65	Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103492032 P...	[more]
A0A6J1DK42	1.7e-127	88.93	Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of CsaV3_1G042800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12840.1	9.9e-51	48.67	nuclear factor Y, subunit A1	[more]
AT5G12840.3	9.9e-51	48.67	nuclear factor Y, subunit A1	[more]
AT5G12840.2	1.3e-50	49.43	nuclear factor Y, subunit A1	[more]
AT5G12840.4	1.3e-50	49.43	nuclear factor Y, subunit A1	[more]
AT3G20910.1	6.0e-48	48.94	nuclear factor Y, subunit A9	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001289	Nuclear transcription factor Y subunit A	PRINTS	PR00616	CCAATSUBUNTB	coord: 174..196 score: 74.15 coord: 205..228 score: 74.77
IPR001289	Nuclear transcription factor Y subunit A	SMART	SM00521	cbf3	coord: 170..231 e-value: 1.2E-32 score: 124.5
IPR001289	Nuclear transcription factor Y subunit A	PFAM	PF02045	CBFB_NFYA	coord: 174..228 e-value: 3.9E-25 score: 88.2
IPR001289	Nuclear transcription factor Y subunit A	PANTHER	PTHR12632	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	coord: 32..261
IPR001289	Nuclear transcription factor Y subunit A	PROSITE	PS51152	NFYA_HAP2_2	coord: 171..231 score: 33.900478
None	No IPR available	GENE3D	6.10.250.2430		coord: 171..233 e-value: 8.3E-28 score: 98.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..225
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 226..250
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 251..269
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..269
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..104
None	No IPR available	PANTHER	PTHR12632:SF59	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-9	coord: 32..261
IPR018362	CCAAT-binding factor, conserved site	PROSITE	PS00686	NFYA_HAP2_1	coord: 176..196

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G042800.1	CsaV3_1G042800.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity